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Protein
Submitted name:

Troponin C

Gene

GSONMT00056460001

Organism
Oncorhynchus mykiss (Rainbow trout) (Salmo gairdneri)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi65 – 651CalciumCombined sources
Metal bindingi67 – 671CalciumCombined sources
Metal bindingi69 – 691CalciumCombined sources
Metal bindingi71 – 711Calcium; via carbonyl oxygenCombined sources
Metal bindingi76 – 761CalciumCombined sources

GO - Molecular functioni

  • calcium ion binding Source: AgBase
Complete GO annotation...

Keywords - Ligandi

CalciumCombined sources, Metal-bindingCombined sources

Names & Taxonomyi

Protein namesi
Submitted name:
Troponin CImported
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:GSONMT00056460001Imported
OrganismiOncorhynchus mykiss (Rainbow trout) (Salmo gairdneri)Imported
Taxonomic identifieri8022 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiProtacanthopterygiiSalmoniformesSalmonidaeSalmoninaeOncorhynchus

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1R2UNMR-A1-89[»]
1R6PNMR-A1-89[»]
SMRiQ7ZZB9. Positions 1-161.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini33 – 5119EF-handInterPro annotationAdd
BLAST
Domaini52 – 8736EF-handInterPro annotationAdd
BLAST
Domaini92 – 12736EF-handInterPro annotationAdd
BLAST
Domaini128 – 16134EF-handInterPro annotationAdd
BLAST

Phylogenomic databases

HOVERGENiHBG012180.

Family and domain databases

Gene3Di1.10.238.10. 2 hits.
InterProiIPR011992. EF-hand-dom_pair.
IPR018247. EF_Hand_1_Ca_BS.
IPR002048. EF_hand_dom.
[Graphical view]
PfamiPF13499. EF-hand_7. 1 hit.
PF13833. EF-hand_8. 1 hit.
[Graphical view]
SMARTiSM00054. EFh. 4 hits.
[Graphical view]
SUPFAMiSSF47473. SSF47473. 1 hit.
PROSITEiPS00018. EF_HAND_1. 3 hits.
PS50222. EF_HAND_2. 4 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q7ZZB9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNDIYKAAVE QLTDEQKNEF KAAFDIFIQD AEDGCISTKE LGKVMRMLGQ
60 70 80 90 100
NPTPEELQEM IDEVDEDGSG TVDFDEFLVM MVRCMKDDSK GKTEEELADL
110 120 130 140 150
FCMFDKNADG YIDLQELKVM LEATGEAITE DDIEELMKDG DKNNDGKIDY
160
DEFLEFMKGV E
Length:161
Mass (Da):18,361
Last modified:June 1, 2003 - v1
Checksum:i8776CD70454B8B42
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY281129 mRNA. Translation: AAP33791.1.
FR905919 Genomic DNA. Translation: CDQ82174.1.
RefSeqiNP_001117928.1. NM_001124456.1.
UniGeneiOmy.30097.

Genome annotation databases

GeneIDi100136178.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY281129 mRNA. Translation: AAP33791.1.
FR905919 Genomic DNA. Translation: CDQ82174.1.
RefSeqiNP_001117928.1. NM_001124456.1.
UniGeneiOmy.30097.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1R2UNMR-A1-89[»]
1R6PNMR-A1-89[»]
SMRiQ7ZZB9. Positions 1-161.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi100136178.

Phylogenomic databases

HOVERGENiHBG012180.

Family and domain databases

Gene3Di1.10.238.10. 2 hits.
InterProiIPR011992. EF-hand-dom_pair.
IPR018247. EF_Hand_1_Ca_BS.
IPR002048. EF_hand_dom.
[Graphical view]
PfamiPF13499. EF-hand_7. 1 hit.
PF13833. EF-hand_8. 1 hit.
[Graphical view]
SMARTiSM00054. EFh. 4 hits.
[Graphical view]
SUPFAMiSSF47473. SSF47473. 1 hit.
PROSITEiPS00018. EF_HAND_1. 3 hits.
PS50222. EF_HAND_2. 4 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ7ZZB9_ONCMY
AccessioniPrimary (citable) accession number: Q7ZZB9
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: September 7, 2016
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.