Unreviewed, UniProtKB/TrEMBL Q7ZV09 (Q7ZV09_DANRE)

Names and origin

Protein names

Submitted name:
    RAD54-like (S. cerevisiae) EMBL AAH46050.1

Gene names

Name:

rad54l EMBL AAH46050.1

Organism

Danio rerio (Zebrafish) (Brachydanio rerio) EMBL AAH46050.1

Taxonomic identifier

7955 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Actinopterygii › Neopterygii › Teleostei › Ostariophysi › Cypriniformes › Cyprinidae › Danio

Protein attributes

Sequence length	738 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level.

Ontologies

Gene Ontology (GO)
Molecular function	ATP binding Inferred from electronic annotation. Source: InterPro DNA binding Inferred from electronic annotation. Source: InterPro DNA-dependent ATPase activity Inferred from direct assay. Source: ZFIN helicase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q7ZV09-1 [UniParc]. Last modified June 1, 2003. Version 1. Checksum: 73A44EEDA070301E	FASTA	738	83,645
	10 20 30 40 50 60 MRRSLAPSQV AKRKQGPDSD DEEDWEPDME PQSKRDCREK YISPYRKPLT PLTNRPVCAD 70 80 90 100 110 120 GNEHEAFIRK ILSKPFKIPI PNYTGVLGLR ALGLRRAGVR KALHDPFEDG ALVLYEPPAI 130 140 150 160 170 180 SAHDLIKADK EKLPVHVVVD PVLSKVLRPH QREGVKFLWD CVTGRRIENS YGCIMADEMG 190 200 210 220 230 240 LGKTLQCITL IWTLLKQSPD CKPEIDKVIV VSPSSLVRNW YNEVGKWLGG RVQPVAIDGG 250 260 270 280 290 300 SKDEIDSKLV NFISQQGMRI PTPILIISYE TFRLHAEVLH KGKVGLVICD EGHRLKNSDN 310 320 330 340 350 360 QTYLALNSMN AQRRVLISGT PIQNDLLEYF SLVHFVNSGI LGTAQEFKKR FEIPILKGRD 370 380 390 400 410 420 ADASDKDRAA GEQKLQELIS IVNRCLIRRT SDILSKYLPV KIEQVVCCNL TPLQKELYKL 430 440 450 460 470 480 FLKQAKPVES LQTGKISVSS LSSITSLKKL CNHPALIYEK CLTGEEGFDG ALDLFPQNYS 490 500 510 520 530 540 TKAVEPQLSG KMLVLDYILA MTRTTTSDKV VLVSNYTQTL DLFEKLCRNR RYLYVRLDGT 550 560 570 580 590 600 MSIKKRAKIV ERFNNPSSPE FIFMLSSKAG GCGLNLIGAN RLVMFDPDWN PANDEQAMAR 610 620 630 640 650 660 VWRDGQKKTC YIYRLLSTGT IEEKILQRQA HKKALSSCVV DEEQDVERHF SLGELRELFS 670 680 690 700 710 720 LNEKTLSDTH DRFRCRRCVN GRQVRPPPDD SDCTCDLSNW HHCADKRGLR DPVLQASWDA 730 AVSFVFHQRS HEDQRGVV

References

[1]	NIH - Zebrafish Gene Collection (ZGC) project Submitted (JAN-2003) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Whole body EMBL AAH46050.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

BC046050 mRNA. Translation: AAH46050.1.

IPI

IPI00507004.

RefSeq

NP_957438.1.

UniGene

Dr.78565

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
1Z3I	X-ray	3.00	X	92-735	[»]

ModBase

Search...

Protein-protein interaction databases

STRING

Q7ZV09.

Genome annotation databases

Ensembl

ENSDART00000011785; ENSDARP00000007237; ENSDARG00000018623; Danio rerio. [Genome view]

GeneID

394119.

KEGG

dre:394119.

Organism-specific databases

CTD

394119.

ZFIN

ZDB-GENE-040426-968. rad54l.

Phylogenomic databases

eggNOG

fiNOG07528.

HOVERGEN

Q7ZV09.

InParanoid

Q7ZV09.

PhylomeDB

Q7ZV09.

Gene expression databases

ArrayExpress

Q7ZV09.

Bgee

Q7ZV09.

Family and domain databases

InterPro

IPR014001. DEAD-like_N.
IPR001650. DNA/RNA_helicase_C.
IPR014021. Helicase_SF1/SF2_ATP-bd.
IPR000330. SNF2_N.
[Graphical view]

Pfam

PF00271. Helicase_C. 1 hit.
PF00176. SNF2_N. 1 hit.
[Graphical view]

SMART

SM00487. DEXDc. 1 hit.
SM00490. HELICc. 1 hit.
[Graphical view]

PROSITE

PS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.
[Graphical view]

ProtoNet

Search...

Entry information

Entry name

Q7ZV09_DANRE

Accession

Primary (citable) accession number: Q7ZV09

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 2003
Last sequence update:	June 1, 2003
Last modified:	February 9, 2010
This is version 47 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)