Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q7ZUS3 (Q7ZUS3_DANRE) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 77. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein attributes

Sequence length587 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Sequences

Sequence LengthMass (Da)Tools
Q7ZUS3 [UniParc].

Last modified June 1, 2003. Version 1.
Checksum: 1CF1FB099242491E

FASTA58766,156
        10         20         30         40         50         60 
MASSAPSSSA GDMDPNTANL RQPATTSDAW YGVAHGCTRK LGMKICGFLQ KNNSLDEKSR 

        70         80         90        100        110        120 
MVGSFKESAK NQMSCDNNER FTRDETDFSN LFARDLLPAK NGEEPTIQFL LEVVEILTNY 

       130        140        150        160        170        180 
VRKTFDRSTK VLDFHHPHQL LEGMEGFNLE LSDQPESLEQ ILVDCRDTLK YGVRTGHPRF 

       190        200        210        220        230        240 
FNQLSSGLDI IGLAGEWLTS TANTNMFTYE IAPVFVLMEQ LTLKKMREII GWPNGDGDAL 

       250        260        270        280        290        300 
FSPGGAISNM YSVMVARYKY FPEVKTKGMS AAPRLVLFTS EHSHYSIKKA GAVLGFGKEN 

       310        320        330        340        350        360 
VILLKTDERG RVIPADLEAK VIDAKQKGYV PLFVNATAGT TVYGAFDPIN DIADICEKYN 

       370        380        390        400        410        420 
LWLHVDGAWG GGLLMSRKHR HKLSGIERAN SVTWNPHKMM GVPLQCSAIL VREKGILQGC 

       430        440        450        460        470        480 
NSMCAGYLFQ PDKQYDVTYD TGDKAIQCGR HVDIFKFWLM WKAKGTIGFE QHIDRCLELS 

       490        500        510        520        530        540 
EYLYNKIKNR EGYEMVFEGQ PQHTNVCFWY IPPSLRGMPN GDERREKLHR VAPKIKAMMM 

       550        560        570        580 
ECGTTMVGYQ PQGDKVNFFR MVVSNHAVTK SDIDFLIDEI ERLGQDL 

« Hide

References

« Hide 'large scale' references
[1]NIH - Zebrafish Gene Collection (ZGC) project
Submitted (MAR-2003) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Whole body EMBL AAH47851.1.
[2]"Distribution of prospective glutamatergic, glycinergic, and GABAergic neurons in embryonic and larval zebrafish."
Higashijima S., Mandel G., Fetcho J.R.
J. Comp. Neurol. 480:1-18(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[3]Ensembl
Submitted (FEB-2012) to UniProtKB
Cited for: IDENTIFICATION.
Strain: Tuebingen Ensembl ENSDARP00000024162.
[4]"The zebrafish reference genome sequence and its relationship to the human genome."
Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L., McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C., Koch R., Rauch G.J. expand/collapse author list , White S., Chow W., Kilian B., Quintais L.T., Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T., Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F., Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H., Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M., Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J., Clee C., Oliver K., Clark R., Riddle C., Eliott D., Threadgold G., Harden G., Ware D., Mortimer B., Kerry G., Heath P., Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P., Barker N., Stevens C., Harley J., Holt K., Panagiotidis G., Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D., Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C., Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J., Murnane C., Gray E., Humphries M., Sycamore N., Barker D., Saunders D., Wallis J., Babbage A., Hammond S., Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A., Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J., Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E., Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., Yang F., Carter N.P., Harrow J., Ning Z., Herrero J., Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C., Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H., Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J., Stemple D.L.
Nature 496:498-503(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Tuebingen Ensembl ENSDARP00000024162.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CR384078 Genomic DNA. No translation available.
BC047851 mRNA. Translation: AAH47851.1.
AB183390 mRNA. Translation: BAD67441.1.
RefSeqNP_919400.1. NM_194419.1.
XP_005172131.1. XM_005172074.1.
UniGeneDr.81985.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING7955.ENSDARP00000024162.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSDART00000003008; ENSDARP00000024162; ENSDARG00000027419.
GeneID378441.
KEGGdre:378441.

Organism-specific databases

CTD378441.
ZFINZDB-GENE-030909-3. gad1b.

Phylogenomic databases

eggNOGCOG0076.
GeneTreeENSGT00730000110441.
HOGENOMHOG000005382.
HOVERGENHBG004980.
KOK01580.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
IPR021115. Pyridoxal-P_BS.
[Graphical view]
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
PROSITEPS00392. DDC_GAD_HDC_YDC. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio20813769.

Entry information

Entry nameQ7ZUS3_DANRE
AccessionPrimary (citable) accession number: Q7ZUS3
Entry history
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: January 22, 2014
This is version 77 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)