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Q7ZU32 (Q7ZU32_DANRE) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 92. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length553 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Subcellular location

Nucleus By similarity PIRNR PIRNR002527.

Sequence similarities

Belongs to the nuclear hormone receptor family. RuleBase RU000377

Belongs to the nuclear hormone receptor family. NR3 subfamily. PIRNR PIRNR002527

Contains nuclear receptor DNA-binding domain. SAAS SAAS001723

Sequences

Sequence LengthMass (Da)Tools
Q7ZU32 [UniParc].

Last modified June 1, 2003. Version 1.
Checksum: 1E7E78AB66AD7A53

FASTA55362,340
        10         20         30         40         50         60 
MSEYPEGDSP LLQLQEVDSG RVGGHILSPI FNSSSPSLPV ENHPICIPSP YTDLGHDFST 

        70         80         90        100        110        120 
LPFYSPALLG YSTSPLSDCS SVRQSLSPTL FWPPHSHVSS LTLQQQSRLQ QNHATSGTWT 

       130        140        150        160        170        180 
EHTPHDHVEE ENSKPLVKRV ADTEETSVSL RGKADMHYCA VCSDYASGYH YGVWSCEGCK 

       190        200        210        220        230        240 
AFFKRSIQGH NDYICPATNQ CTIDKNRRKS CQACRLRKCY EVGMMKCGLR RDRSSYQQRG 

       250        260        270        280        290        300 
AQQKRLVRFS GRMRMTGPRS QEIKSIPRPL SGNEVVRISL SPEELISRIM EAEPPEIYLM 

       310        320        330        340        350        360 
KDMKKPFTEA NVMMSLTNLA DKELVHMISW AKKIPGFVEL SLFDQVHLLE CCWLEVLMLG 

       370        380        390        400        410        420 
LMWRSVNHPG KLIFSPDLCL SRDESSCVQG LVEIFDMLLA ATSRFRELKL QREEYVCLKA 

       430        440        450        460        470        480 
MILLNSNMCL GSSEGGEDLQ SRSKLLCLLD SVTDALVWAI SKTGLSFQQR STRLAHLLML 

       490        500        510        520        530        540 
LSHIRHVSNK GMDHLHCMKM KKMVPLYDLL LEMLDAHIMH SSRLSHSGPR APAAHKDNKS 

       550 
VQEAFPCSSQ HGP 

« Hide

References

« Hide 'large scale' references
[1]NIH - Zebrafish Gene Collection (ZGC) project
Submitted (JAN-2003) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: AB EMBL AAH44349.1.
Tissue: Whole body EMBL AAH44349.1.
[2]"Cloning and characterization of a novel truncated estrogen receptor alpha in zebrafish."
Zeinstra L.M., Schuitemaker F., van der Burg B., Wang D., Bogerd J., van der Saag P.T.
Submitted (MAY-2003) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[3]NIH - Zebrafish Gene Collection (ZGC) project
Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: PCR rescue EMBL AAI65404.1.
[4]Ensembl
Submitted (FEB-2012) to UniProtKB
Cited for: IDENTIFICATION.
Strain: Tuebingen Ensembl ENSDARP00000017514 Ensembl ENSDARP00000110930.
[5]"The zebrafish reference genome sequence and its relationship to the human genome."
Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L., McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C., Koch R., Rauch G.J. expand/collapse author list , White S., Chow W., Kilian B., Quintais L.T., Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T., Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F., Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H., Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M., Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J., Clee C., Oliver K., Clark R., Riddle C., Eliott D., Threadgold G., Harden G., Ware D., Mortimer B., Kerry G., Heath P., Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P., Barker N., Stevens C., Harley J., Holt K., Panagiotidis G., Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D., Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C., Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J., Murnane C., Gray E., Humphries M., Sycamore N., Barker D., Saunders D., Wallis J., Babbage A., Hammond S., Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A., Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J., Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E., Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., Yang F., Carter N.P., Harrow J., Ning Z., Herrero J., Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C., Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H., Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J., Stemple D.L.
Nature 496:498-503(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Tuebingen Ensembl ENSDARP00000017514 Ensembl ENSDARP00000110930.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BX255911 Genomic DNA. No translation available.
BC044349 mRNA. Translation: AAH44349.1.
BC165404 mRNA. Translation: AAI65404.1.
AY307098 mRNA. Translation: AAR03588.1.
RefSeqNP_851297.1. NM_180966.2.
XP_005160545.1. XM_005160488.1.
UniGeneDr.80416.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSDART00000010643; ENSDARP00000017514; ENSDARG00000016454.
ENSDART00000131069; ENSDARP00000110930; ENSDARG00000016454.
GeneID317734.
KEGGdre:317734.

Organism-specific databases

CTD317734.
ZFINZDB-GENE-030116-2. esr2a.

Phylogenomic databases

eggNOGNOG271979.
GeneTreeENSGT00730000110346.
HOGENOMHOG000233468.
HOVERGENHBG108344.
InParanoidQ7ZU32.
KOK08551.
OMALECCWLE.
TreeFamTF323751.

Family and domain databases

Gene3D1.10.565.10. 2 hits.
3.30.50.10. 1 hit.
InterProIPR028355. ER-beta/gamma.
IPR021064. Estrogen_rcpt_beta_N.
IPR008946. Nucl_hormone_rcpt_ligand-bd.
IPR000536. Nucl_hrmn_rcpt_lig-bd_core.
IPR024178. Oest_rcpt/oest-rel_rcp.
IPR001723. Str_hrmn_rcpt.
IPR001628. Znf_hrmn_rcpt.
IPR013088. Znf_NHR/GATA.
[Graphical view]
PfamPF12497. ERbeta_N. 1 hit.
PF00104. Hormone_recep. 1 hit.
PF00105. zf-C4. 1 hit.
[Graphical view]
PIRSFPIRSF500102. ER-b. 1 hit.
PIRSF002527. ER-like_NR. 1 hit.
PRINTSPR00398. STRDHORMONER.
PR00047. STROIDFINGER.
SMARTSM00430. HOLI. 1 hit.
SM00399. ZnF_C4. 1 hit.
[Graphical view]
SUPFAMSSF48508. SSF48508. 1 hit.
PROSITEPS00031. NUCLEAR_REC_DBD_1. 1 hit.
PS51030. NUCLEAR_REC_DBD_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio20807163.
PROQ7ZU32.

Entry information

Entry nameQ7ZU32_DANRE
AccessionPrimary (citable) accession number: Q7ZU32
Entry history
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: May 14, 2014
This is version 92 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)