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Protein

Probable ribonucleases P protein subunit pop8

Gene

pop8

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.By similarity

Catalytic activityi

Endonucleolytic cleavage of RNA, removing 5'-extranucleotides from tRNA precursor.

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Hydrolase

Keywords - Biological processi

tRNA processing

Names & Taxonomyi

Protein namesi
Recommended name:
Probable ribonucleases P protein subunit pop8 (EC:3.1.26.5)
Gene namesi
Name:pop8
ORF Names:SPBC1709.20
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome II

Organism-specific databases

EuPathDBiFungiDB:SPBC1709.20.
PomBaseiSPBC1709.20. pop8.

Subcellular locationi

GO - Cellular componenti

  • cytosol Source: PomBase
  • nucleolar ribonuclease P complex Source: PomBase
  • nucleus Source: PomBase
  • ribonuclease MRP complex Source: PomBase
Complete GO annotation...

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 108108Probable ribonucleases P protein subunit pop8PRO_0000058520Add
BLAST

Interactioni

Protein-protein interaction databases

BioGridi280349. 1 interaction.
MINTiMINT-4700735.

Family & Domainsi

Phylogenomic databases

InParanoidiQ7Z996.
KOiK14528.
OrthoDBiEOG7W9S74.
PhylomeDBiQ7Z996.

Family and domain databases

InterProiIPR020347. Pop8.
[Graphical view]
ProDomiPD082524. Ribonucleases_P/MRP_su_POP8. 1 hit.
[Graphical view] [Entries sharing at least one domain]

Sequencei

Sequence statusi: Complete.

Q7Z996-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVLHQRLKSE WSYIILEVVG GTTPIDEIDD ISLRHLITLA LNQSFGIFGS
60 70 80 90 100
AIPIDFLHRQ SKFLYLRCHK EDKKKVLVAL GSYVREPEQI RLMVLHASDF

PCQAVPFS
Length:108
Mass (Da):12,379
Last modified:October 1, 2003 - v1
Checksum:i9194B49D86C4718A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329671 Genomic DNA. Translation: CAD99064.1.
RefSeqiNP_001018786.1. NM_001021349.1.

Genome annotation databases

EnsemblFungiiSPBC1709.20.1; SPBC1709.20.1:pep; SPBC1709.20.
GeneIDi3361273.
KEGGispo:SPBC1709.20.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329671 Genomic DNA. Translation: CAD99064.1.
RefSeqiNP_001018786.1. NM_001021349.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi280349. 1 interaction.
MINTiMINT-4700735.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiSPBC1709.20.1; SPBC1709.20.1:pep; SPBC1709.20.
GeneIDi3361273.
KEGGispo:SPBC1709.20.

Organism-specific databases

EuPathDBiFungiDB:SPBC1709.20.
PomBaseiSPBC1709.20. pop8.

Phylogenomic databases

InParanoidiQ7Z996.
KOiK14528.
OrthoDBiEOG7W9S74.
PhylomeDBiQ7Z996.

Miscellaneous databases

NextBioi20811366.
PROiQ7Z996.

Family and domain databases

InterProiIPR020347. Pop8.
[Graphical view]
ProDomiPD082524. Ribonucleases_P/MRP_su_POP8. 1 hit.
[Graphical view] [Entries sharing at least one domain]
ProtoNetiSearch...

Publicationsi

  1. "The genome sequence of Schizosaccharomyces pombe."
    Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A., Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S., Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M.
    , Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S., Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S., Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D., Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P., Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K., O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M., Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N., Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A., Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R., Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A., Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A., Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H., Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S., Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C., Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A., Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M., del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S., Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R., Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G., Nurse P.
    Nature 415:871-880(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 972 / ATCC 24843.

Entry informationi

Entry nameiPOP8_SCHPO
AccessioniPrimary (citable) accession number: Q7Z996
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 19, 2004
Last sequence update: October 1, 2003
Last modified: April 13, 2016
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.