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Protein

Probable ribonucleases P protein subunit pop8

Gene

pop8

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.By similarity

Catalytic activityi

Endonucleolytic cleavage of RNA, removing 5'-extranucleotides from tRNA precursor.

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Hydrolase

Keywords - Biological processi

tRNA processing

Names & Taxonomyi

Protein namesi
Recommended name:
Probable ribonucleases P protein subunit pop8 (EC:3.1.26.5)
Gene namesi
Name:pop8
ORF Names:SPBC1709.20
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome II

Organism-specific databases

EuPathDBiFungiDB:SPBC1709.20.
PomBaseiSPBC1709.20. pop8.

Subcellular locationi

GO - Cellular componenti

  • cytosol Source: PomBase
  • nucleolar ribonuclease P complex Source: PomBase
  • nucleus Source: PomBase
  • ribonuclease MRP complex Source: PomBase
Complete GO annotation...

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000585201 – 108Probable ribonucleases P protein subunit pop8Add BLAST108

Proteomic databases

PRIDEiQ7Z996.

Interactioni

Protein-protein interaction databases

BioGridi280349. 1 interactor.
MINTiMINT-4700735.

Family & Domainsi

Phylogenomic databases

InParanoidiQ7Z996.
KOiK14528.
OrthoDBiEOG092C5P1G.
PhylomeDBiQ7Z996.

Family and domain databases

InterProiIPR020347. Pop8.
[Graphical view]
ProDomiPD082524. Ribonucleases_P/MRP_su_POP8. 1 hit.
[Graphical view] [Entries sharing at least one domain]

Sequencei

Sequence statusi: Complete.

Q7Z996-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVLHQRLKSE WSYIILEVVG GTTPIDEIDD ISLRHLITLA LNQSFGIFGS
60 70 80 90 100
AIPIDFLHRQ SKFLYLRCHK EDKKKVLVAL GSYVREPEQI RLMVLHASDF

PCQAVPFS
Length:108
Mass (Da):12,379
Last modified:October 1, 2003 - v1
Checksum:i9194B49D86C4718A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329671 Genomic DNA. Translation: CAD99064.1.
RefSeqiNP_001018786.1. NM_001021349.1.

Genome annotation databases

EnsemblFungiiSPBC1709.20.1; SPBC1709.20.1:pep; SPBC1709.20.
GeneIDi3361273.
KEGGispo:SPBC1709.20.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329671 Genomic DNA. Translation: CAD99064.1.
RefSeqiNP_001018786.1. NM_001021349.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi280349. 1 interactor.
MINTiMINT-4700735.

Proteomic databases

PRIDEiQ7Z996.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiSPBC1709.20.1; SPBC1709.20.1:pep; SPBC1709.20.
GeneIDi3361273.
KEGGispo:SPBC1709.20.

Organism-specific databases

EuPathDBiFungiDB:SPBC1709.20.
PomBaseiSPBC1709.20. pop8.

Phylogenomic databases

InParanoidiQ7Z996.
KOiK14528.
OrthoDBiEOG092C5P1G.
PhylomeDBiQ7Z996.

Miscellaneous databases

PROiQ7Z996.

Family and domain databases

InterProiIPR020347. Pop8.
[Graphical view]
ProDomiPD082524. Ribonucleases_P/MRP_su_POP8. 1 hit.
[Graphical view] [Entries sharing at least one domain]
ProtoNetiSearch...

Entry informationi

Entry nameiPOP8_SCHPO
AccessioniPrimary (citable) accession number: Q7Z996
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 19, 2004
Last sequence update: October 1, 2003
Last modified: November 30, 2016
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.