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Protein

UPF0469 protein KIAA0907

Gene

KIAA0907

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0469 protein KIAA0907
Gene namesi
Name:KIAA0907
Synonyms:BLOM7
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 1

Organism-specific databases

HGNCiHGNC:29145. KIAA0907.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA142671618.

Polymorphism and mutation databases

BioMutaiKIAA0907.
DMDMi74750236.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 614614UPF0469 protein KIAA0907PRO_0000296669Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei571 – 5711PhosphoserineCombined sources
Modified residuei572 – 5721PhosphoserineCombined sources

Keywords - PTMi

Phosphoprotein

Proteomic databases

EPDiQ7Z7F0.
MaxQBiQ7Z7F0.
PaxDbiQ7Z7F0.
PeptideAtlasiQ7Z7F0.
PRIDEiQ7Z7F0.

PTM databases

iPTMnetiQ7Z7F0.
PhosphoSiteiQ7Z7F0.

Expressioni

Gene expression databases

BgeeiQ7Z7F0.
CleanExiHS_KIAA0907.
GenevisibleiQ7Z7F0. HS.

Organism-specific databases

HPAiHPA008796.

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
PUF60Q9UHX13EBI-751942,EBI-1053259
RBM39Q144983EBI-751942,EBI-395290
RBM39Q14498-33EBI-751942,EBI-6654703
SF1Q156375EBI-751942,EBI-744603

Protein-protein interaction databases

BioGridi116555. 23 interactions.
IntActiQ7Z7F0. 7 interactions.
STRINGi9606.ENSP00000357304.

Structurei

Secondary structure

1
614
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Beta strandi231 – 2366Combined sources
Turni244 – 2463Combined sources
Helixi248 – 2525Combined sources
Helixi255 – 2573Combined sources
Helixi258 – 26710Combined sources
Beta strandi270 – 2767Combined sources
Turni283 – 2853Combined sources
Beta strandi290 – 2923Combined sources
Beta strandi294 – 3018Combined sources
Helixi302 – 33029Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2YQRNMR-A227-338[»]
ProteinModelPortaliQ7Z7F0.
SMRiQ7Z7F0. Positions 228-338.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ7Z7F0.

Family & Domainsi

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi335 – 457123Pro-richAdd
BLAST

Sequence similaritiesi

Belongs to the UPF0469 family.Curated

Phylogenomic databases

eggNOGiENOG410IT0P. Eukaryota.
ENOG4111JYD. LUCA.
GeneTreeiENSGT00510000047412.
HOGENOMiHOG000067879.
HOVERGENiHBG099830.
InParanoidiQ7Z7F0.
OMAiMSGPFIP.
OrthoDBiEOG7BW0K7.
PhylomeDBiQ7Z7F0.

Family and domain databases

Gene3Di3.30.1370.10. 2 hits.
InterProiIPR004088. KH_dom_type_1.
IPR031121. KH_prot.
[Graphical view]
PANTHERiPTHR15744:SF0. PTHR15744:SF0. 1 hit.
SUPFAMiSSF54791. SSF54791. 2 hits.

Sequences (4)i

Sequence statusi: Complete.

This entry describes 4 isoformsi produced by alternative splicing. AlignAdd to basket

Isoform 1 (identifier: Q7Z7F0-1) [UniParc]FASTAAdd to basket

Also known as: Alpha

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

        10         20         30         40         50
MSAGSATHPG AGGRRSKWDQ PAPAPLLFLP PAAPGGEVTS SGGSPGGTTA
60 70 80 90 100
APSGALDAAA AVAAKINAML MAKGKLKPTQ NASEKLQAPG KGLTSNKSKD
110 120 130 140 150
DLVVAEVEIN DVPLTCRNLL TRGQTQDEIS RLSGAAVSTR GRFMTTEEKA
160 170 180 190 200
KVGPGDRPLY LHVQGQTREL VDRAVNRIKE IITNGVVKAA TGTSPTFNGA
210 220 230 240 250
TVTVYHQPAP IAQLSPAVSQ KPPFQSGMHY VQDKLFVGLE HAVPTFNVKE
260 270 280 290 300
KVEGPGCSYL QHIQIETGAK VFLRGKGSGC IEPASGREAF EPMYIYISHP
310 320 330 340 350
KPEGLAAAKK LCENLLQTVH AEYSRFVNQI NTAVPLPGYT QPSAISSVPP
360 370 380 390 400
QPPYYPSNGY QSGYPVVPPP QQPVQPPYGV PSIVPPAVSL APGVLPALPT
410 420 430 440 450
GVPPVPTQYP ITQVQPPAST GQSPMGGPFI PAAPVKTALP AGPQPQPQPQ
460 470 480 490 500
PPLPSQPQAQ KRRFTEELPD ERESGLLGYQ HGPIHMTNLG TGFSSQNEIE
510 520 530 540 550
GAGSKPASSS GKERERDRQL MPPPAFPVTG IKTESDERNG SGTLTGSHDY
560 570 580 590 600
PAKKMKTTEK GFGLVAYAAD SSDEEEEHGG HKNASSFPQG WSLGYQYPSS
610
QPRAKQQMPF WMAP
Length:614
Mass (Da):64,845
Last modified:October 1, 2003 - v1
Checksum:i61968993DA061561
GO
Isoform 2 (identifier: Q7Z7F0-2) [UniParc]FASTAAdd to basket

Also known as: Beta

The sequence of this isoform differs from the canonical sequence as follows:
     549-564: DYPAKKMKTTEKGFGL → GECDIAGGTGEWLRLV
     565-614: Missing.

Show »
Length:564
Mass (Da):59,138
Checksum:i6CAEC61BE66BB4CE
GO
Isoform 3 (identifier: Q7Z7F0-3) [UniParc]FASTAAdd to basket

Also known as: Gamma

The sequence of this isoform differs from the canonical sequence as follows:
     338-378: GYTQPSAISS...PPQQPVQPPY → AASSTSLRST...IPDNTSAASS
     379-614: Missing.

Show »
Length:384
Mass (Da):40,283
Checksum:i55E581185DDDD64D
GO
Isoform 4 (identifier: Q7Z7F0-4) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     228-241: MHYVQDKLFVGLEH → VCFGEGSLIALSFL
     242-614: Missing.

Show »
Length:241
Mass (Da):24,732
Checksum:iD707FA95D343AD55
GO

Sequence cautioni

The sequence BAA74930.2 differs from that shown. Reason: Erroneous initiation. Curated

Alternative sequence

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Alternative sequencei228 – 24114MHYVQ…VGLEH → VCFGEGSLIALSFL in isoform 4. 1 PublicationVSP_027238Add
BLAST
Alternative sequencei242 – 614373Missing in isoform 4. 1 PublicationVSP_027239Add
BLAST
Alternative sequencei338 – 37841GYTQP…VQPPY → AASSTSLRSTKHSATSCFIS TWSLAGITYWSPTCANTIPD NTSAASS in isoform 3. 1 PublicationVSP_027240Add
BLAST
Alternative sequencei379 – 614236Missing in isoform 3. 1 PublicationVSP_027241Add
BLAST
Alternative sequencei549 – 56416DYPAK…KGFGL → GECDIAGGTGEWLRLV in isoform 2. 2 PublicationsVSP_027242Add
BLAST
Alternative sequencei565 – 61450Missing in isoform 2. 2 PublicationsVSP_027243Add
BLAST

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY112680 mRNA. Translation: AAM51855.1.
AY112681 mRNA. Translation: AAM51856.1.
AY112682 mRNA. Translation: AAM51857.1.
AB020714 mRNA. Translation: BAA74930.2. Different initiation.
AL355388 Genomic DNA. Translation: CAH72623.1.
AL355388 Genomic DNA. Translation: CAH72624.1.
AL355388 Genomic DNA. Translation: CAH72625.1.
BC027182 mRNA. Translation: AAH27182.1.
BC062637 mRNA. Translation: AAH62637.1.
CCDSiCCDS30885.1. [Q7Z7F0-1]
RefSeqiNP_055764.2. NM_014949.3. [Q7Z7F0-1]
UniGeneiHs.24656.

Genome annotation databases

EnsembliENST00000368319; ENSP00000357302; ENSG00000132680. [Q7Z7F0-3]
ENST00000368320; ENSP00000357303; ENSG00000132680. [Q7Z7F0-2]
ENST00000368321; ENSP00000357304; ENSG00000132680. [Q7Z7F0-1]
GeneIDi22889.
KEGGihsa:22889.
UCSCiuc001fmi.2. human. [Q7Z7F0-1]

Keywords - Coding sequence diversityi

Alternative splicing

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY112680 mRNA. Translation: AAM51855.1.
AY112681 mRNA. Translation: AAM51856.1.
AY112682 mRNA. Translation: AAM51857.1.
AB020714 mRNA. Translation: BAA74930.2. Different initiation.
AL355388 Genomic DNA. Translation: CAH72623.1.
AL355388 Genomic DNA. Translation: CAH72624.1.
AL355388 Genomic DNA. Translation: CAH72625.1.
BC027182 mRNA. Translation: AAH27182.1.
BC062637 mRNA. Translation: AAH62637.1.
CCDSiCCDS30885.1. [Q7Z7F0-1]
RefSeqiNP_055764.2. NM_014949.3. [Q7Z7F0-1]
UniGeneiHs.24656.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2YQRNMR-A227-338[»]
ProteinModelPortaliQ7Z7F0.
SMRiQ7Z7F0. Positions 228-338.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi116555. 23 interactions.
IntActiQ7Z7F0. 7 interactions.
STRINGi9606.ENSP00000357304.

PTM databases

iPTMnetiQ7Z7F0.
PhosphoSiteiQ7Z7F0.

Polymorphism and mutation databases

BioMutaiKIAA0907.
DMDMi74750236.

Proteomic databases

EPDiQ7Z7F0.
MaxQBiQ7Z7F0.
PaxDbiQ7Z7F0.
PeptideAtlasiQ7Z7F0.
PRIDEiQ7Z7F0.

Protocols and materials databases

DNASUi22889.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000368319; ENSP00000357302; ENSG00000132680. [Q7Z7F0-3]
ENST00000368320; ENSP00000357303; ENSG00000132680. [Q7Z7F0-2]
ENST00000368321; ENSP00000357304; ENSG00000132680. [Q7Z7F0-1]
GeneIDi22889.
KEGGihsa:22889.
UCSCiuc001fmi.2. human. [Q7Z7F0-1]

Organism-specific databases

CTDi22889.
GeneCardsiKIAA0907.
HGNCiHGNC:29145. KIAA0907.
HPAiHPA008796.
neXtProtiNX_Q7Z7F0.
PharmGKBiPA142671618.
HUGEiSearch...
GenAtlasiSearch...

Phylogenomic databases

eggNOGiENOG410IT0P. Eukaryota.
ENOG4111JYD. LUCA.
GeneTreeiENSGT00510000047412.
HOGENOMiHOG000067879.
HOVERGENiHBG099830.
InParanoidiQ7Z7F0.
OMAiMSGPFIP.
OrthoDBiEOG7BW0K7.
PhylomeDBiQ7Z7F0.

Miscellaneous databases

ChiTaRSiKIAA0907. human.
EvolutionaryTraceiQ7Z7F0.
GenomeRNAii22889.
PROiQ7Z7F0.

Gene expression databases

BgeeiQ7Z7F0.
CleanExiHS_KIAA0907.
GenevisibleiQ7Z7F0. HS.

Family and domain databases

Gene3Di3.30.1370.10. 2 hits.
InterProiIPR004088. KH_dom_type_1.
IPR031121. KH_prot.
[Graphical view]
PANTHERiPTHR15744:SF0. PTHR15744:SF0. 1 hit.
SUPFAMiSSF54791. SSF54791. 2 hits.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Splicing variants of BLOM7."
    Loescher M., Zehentner S., Kaisermayer C., Gross S., Katinger H., Grillari J.
    Submitted (MAY-2002) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 1; 2 AND 3).
  2. "Prediction of the coding sequences of unidentified human genes. XII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro."
    Nagase T., Ishikawa K., Suyama M., Kikuno R., Hirosawa M., Miyajima N., Tanaka A., Kotani H., Nomura N., Ohara O.
    DNA Res. 5:355-364(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2).
    Tissue: Brain.
  3. Ohara O., Suyama M., Kikuno R., Nagase T., Ishikawa K.
    Submitted (JAN-2004) to the EMBL/GenBank/DDBJ databases
    Cited for: SEQUENCE REVISION.
  4. "The DNA sequence and biological annotation of human chromosome 1."
    Gregory S.G., Barlow K.F., McLay K.E., Kaul R., Swarbreck D., Dunham A., Scott C.E., Howe K.L., Woodfine K., Spencer C.C.A., Jones M.C., Gillson C., Searle S., Zhou Y., Kokocinski F., McDonald L., Evans R., Phillips K.
    , Atkinson A., Cooper R., Jones C., Hall R.E., Andrews T.D., Lloyd C., Ainscough R., Almeida J.P., Ambrose K.D., Anderson F., Andrew R.W., Ashwell R.I.S., Aubin K., Babbage A.K., Bagguley C.L., Bailey J., Beasley H., Bethel G., Bird C.P., Bray-Allen S., Brown J.Y., Brown A.J., Buckley D., Burton J., Bye J., Carder C., Chapman J.C., Clark S.Y., Clarke G., Clee C., Cobley V., Collier R.E., Corby N., Coville G.J., Davies J., Deadman R., Dunn M., Earthrowl M., Ellington A.G., Errington H., Frankish A., Frankland J., French L., Garner P., Garnett J., Gay L., Ghori M.R.J., Gibson R., Gilby L.M., Gillett W., Glithero R.J., Grafham D.V., Griffiths C., Griffiths-Jones S., Grocock R., Hammond S., Harrison E.S.I., Hart E., Haugen E., Heath P.D., Holmes S., Holt K., Howden P.J., Hunt A.R., Hunt S.E., Hunter G., Isherwood J., James R., Johnson C., Johnson D., Joy A., Kay M., Kershaw J.K., Kibukawa M., Kimberley A.M., King A., Knights A.J., Lad H., Laird G., Lawlor S., Leongamornlert D.A., Lloyd D.M., Loveland J., Lovell J., Lush M.J., Lyne R., Martin S., Mashreghi-Mohammadi M., Matthews L., Matthews N.S.W., McLaren S., Milne S., Mistry S., Moore M.J.F., Nickerson T., O'Dell C.N., Oliver K., Palmeiri A., Palmer S.A., Parker A., Patel D., Pearce A.V., Peck A.I., Pelan S., Phelps K., Phillimore B.J., Plumb R., Rajan J., Raymond C., Rouse G., Saenphimmachak C., Sehra H.K., Sheridan E., Shownkeen R., Sims S., Skuce C.D., Smith M., Steward C., Subramanian S., Sycamore N., Tracey A., Tromans A., Van Helmond Z., Wall M., Wallis J.M., White S., Whitehead S.L., Wilkinson J.E., Willey D.L., Williams H., Wilming L., Wray P.W., Wu Z., Coulson A., Vaudin M., Sulston J.E., Durbin R.M., Hubbard T., Wooster R., Dunham I., Carter N.P., McVean G., Ross M.T., Harrow J., Olson M.V., Beck S., Rogers J., Bentley D.R.
    Nature 441:315-321(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  5. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 4).
    Tissue: Adrenal cortex and Lymph.
  6. Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-571 AND SER-572, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    Tissue: Cervix carcinoma.
  7. "Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions."
    Mayya V., Lundgren D.H., Hwang S.-I., Rezaul K., Wu L., Eng J.K., Rodionov V., Han D.K.
    Sci. Signal. 2:RA46-RA46(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-571 AND SER-572, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    Tissue: Leukemic T-cell.
  8. "An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome."
    Bian Y., Song C., Cheng K., Dong M., Wang F., Huang J., Sun D., Wang L., Ye M., Zou H.
    J. Proteomics 96:253-262(2014) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    Tissue: Liver.
  9. "solution structure of the KH domain in KIAA0907 protein."
    RIKEN structural genomics initiative (RSGI)
    Submitted (FEB-2009) to the PDB data bank
    Cited for: STRUCTURE BY NMR OF 227-338.

Entry informationi

Entry nameiK0907_HUMAN
AccessioniPrimary (citable) accession number: Q7Z7F0
Secondary accession number(s): O94981
, Q7L7Q2, Q7Z7E9, Q8TBQ0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 24, 2007
Last sequence update: October 1, 2003
Last modified: July 6, 2016
This is version 109 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Human chromosome 1
    Human chromosome 1: entries, gene names and cross-references to MIM
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. SIMILARITY comments
    Index of protein domains and families
  4. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.