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Q7Z6I6 (RHG30_HUMAN) Reviewed, UniProtKB/Swiss-Prot

Last modified April 3, 2013. Version 76. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (5) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Rho GTPase-activating protein 30
Alternative name(s):
Rho-type GTPase-activating protein 30
Gene names
Name:ARHGAP30
OrganismHomo sapiens (Human) [Reference proteome]
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length1101 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

GTPase-activating protein (GAP) for RAC1 and RHOA, but not for CDC42. Ref.8

Subunit structure

Interacts with RHOU in a GTP-independent manner. Ref.8

Subcellular location

Cytoplasmic vesicle Ref.8.

Sequence similarities

Contains 1 Rho-GAP domain.

Sequence caution

The sequence AAH43387.1 differs from that shown. Reason: Contaminating sequence. Potential poly-A sequence.

The sequence BAD18709.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.

The sequence CAI15373.1 differs from that shown. Reason: Erroneous gene model prediction.

The sequence CAI15375.1 differs from that shown. Reason: Erroneous gene model prediction.

Alternative products

This entry describes 4 isoforms produced by alternative splicing. [Align] [Select]
Isoform 1 (identifier: Q7Z6I6-1)

Also known as: L-ARHGAP30; L-30;

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.
Isoform 2 (identifier: Q7Z6I6-2)

Also known as: S-ARHGAP30; S-30;

The sequence of this isoform differs from the canonical sequence as follows:
     679-889: Missing.
Note: No experimental confirmation available.
Isoform 3 (identifier: Q7Z6I6-3)

The sequence of this isoform differs from the canonical sequence as follows:
     1-148: Missing.
Note: No experimental confirmation available.
Isoform 4 (identifier: Q7Z6I6-4)

The sequence of this isoform differs from the canonical sequence as follows:
     223-243: GEVESGWRSLPGTRASGSPED → QCPPCPPHIPLLGSQVSYSEP
     244-1101: Missing.
Note: No experimental confirmation available.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 11011101Rho GTPase-activating protein 30
PRO_0000280478

Regions

Domain20 – 215196Rho-GAP
Compositional bias650 – 901252Glu-rich

Amino acid modifications

Modified residue9961Phosphoserine Ref.6

Natural variations

Alternative sequence1 – 148148Missing in isoform 3.
VSP_023732
Alternative sequence223 – 24321GEVES…GSPED → QCPPCPPHIPLLGSQVSYSE P in isoform 4.
VSP_023733
Alternative sequence244 – 1101858Missing in isoform 4.
VSP_023734
Alternative sequence679 – 889211Missing in isoform 2.
VSP_023735
Natural variant701F → L. Ref.4
Corresponds to variant rs17854839 [ dbSNP | Ensembl ].
VAR_031157
Natural variant5911L → V. Ref.2 Ref.4
Corresponds to variant rs3813609 [ dbSNP | Ensembl ].
VAR_031158

Experimental info

Sequence conflict10341S → P in BAD18709. Ref.1

Sequences

Sequence LengthMass (Da)Tools
Isoform 1 (L-ARHGAP30) (L-30) [UniParc].

Last modified May 31, 2011. Version 3.
Checksum: A2BBD3079C55C563

FASTA1,101118,582
        10         20         30         40         50         60 
MKSRQKGKKK GSAKERVFGC DLQEHLQHSG QEVPQVLKSC AEFVEEYGVV DGIYRLSGVS 

        70         80         90        100        110        120 
SNIQKLRQEF ESERKPDLRR DVYLQDIHCV SSLCKAYFRE LPDPLLTYRL YDKFAEAVGV 

       130        140        150        160        170        180 
QLEPERLVKI LEVLRELPVP NYRTLEFLMR HLVHMASFSA QTNMHARNLA IVWAPNLLRS 

       190        200        210        220        230        240 
KDIEASGFNG TAAFMEVRVQ SIVVEFILTH VDQLFGGAAL SGGEVESGWR SLPGTRASGS 

       250        260        270        280        290        300 
PEDLMPRPLP YHLPSILQAG DGPPQMRPYH TIIEIAEHKR KGSLKVRKWR SIFNLGRSGH 

       310        320        330        340        350        360 
ETKRKLPRGA EDREDKSNKG TLRPAKSMDS LSAAAGASDE PEGLVGPSSP RPSPLLPESL 

       370        380        390        400        410        420 
ENDSIEAAEG EQEPEAEALG GTNSEPGTPR AGRSAIRAGG SSRAERCAGV HISDPYNVNL 

       430        440        450        460        470        480 
PLHITSILSV PPNIISNVSL ARLTRGLECP ALQHRPSPAS GPGPGPGLGP GPPDEKLEAS 

       490        500        510        520        530        540 
PASSPLADSG PDDLAPALED SLSQEVQDSF SFLEDSSSSE PEWVGAEDGE VAQAEAAGAA 

       550        560        570        580        590        600 
FSPGEDDPGM GYLEELLGVG PQVEEFSVEP PLDDLSLDEA QFVLAPSCCS LDSAGPRPEV 

       610        620        630        640        650        660 
EEENGEEVFL SAYDDLSPLL GPKPPIWKGS GSLEGEAAGC GRQALGQGGE EQACWEVGED 

       670        680        690        700        710        720 
KQAEPGGRLD IREEAEGSPE TKVEAGKASE DRGEAGGSQE TKVRLREGSR EETEAKEEKS 

       730        740        750        760        770        780 
KGQKKADSME AKGVEEPGGD EYTDEKEKEI EREEDEQREE AQVEAGRDLE QGAQEDQVAE 

       790        800        810        820        830        840 
EKWEVVQKQE AEGVREDEDK GQREKGYHEA RKDQGDGEDS RSPEAATEGG AGEVSKERES 

       850        860        870        880        890        900 
GDGEAEGDQR AGGYYLEEDT LSEGSGVASL EVDCAKEGNP HSSEMEEVAP QPPQPEEMEP 

       910        920        930        940        950        960 
EGQPSPDGCL CPCSLGLGGV GMRLASTLVQ VQQVRSVPVV PPKPQFAKMP SAMCSKIHVA 

       970        980        990       1000       1010       1020 
PANPCPRPGR LDGTPGERAW GSRASRSSWR NGGSLSFDAA VALARDRQRT EAQGVRRTQT 

      1030       1040       1050       1060       1070       1080 
CTEGGDYCLI PRTSPCSMIS AHSPRPLSCL ELPSEGAEGS GSRSRLSLPP REPQVPDPLL 

      1090       1100 
SSQRRSYAFE TQANPGKGEG L 

« Hide

Isoform 2 (S-ARHGAP30) (S-30) [UniParc].

Checksum: DE42EA5D17DE34F7
Show »

FASTA89095,514
Isoform 3 [UniParc].

Checksum: 6D6430209E6081BF
Show »

FASTA953101,381
Isoform 4 [UniParc].

Checksum: 63C51237563EB79E
Show »

FASTA24327,515

References

« Hide 'large scale' references
[1]"The nucleotide sequence of a long cDNA clone isolated from human spleen."
Jikuya H., Takano J., Nomura N., Kikuno R., Nagase T., Ohara O.
Submitted (APR-2004) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
Tissue: Spleen.
[2]"The full-ORF clone resource of the German cDNA consortium."
Bechtel S., Rosenfelder H., Duda A., Schmidt C.P., Ernst U., Wellenreuther R., Mehrle A., Schuster C., Bahr A., Bloecker H., Heubner D., Hoerlein A., Michel G., Wedler H., Koehrer K., Ottenwaelder B., Poustka A., Wiemann S., Schupp I.
BMC Genomics 8:399-399(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 4), VARIANT VAL-591.
Tissue: Endometrium.
[3]"The DNA sequence and biological annotation of human chromosome 1."
Gregory S.G., Barlow K.F., McLay K.E., Kaul R., Swarbreck D., Dunham A., Scott C.E., Howe K.L., Woodfine K., Spencer C.C.A., Jones M.C., Gillson C., Searle S., Zhou Y., Kokocinski F., McDonald L., Evans R., Phillips K. expand/collapse author list , Atkinson A., Cooper R., Jones C., Hall R.E., Andrews T.D., Lloyd C., Ainscough R., Almeida J.P., Ambrose K.D., Anderson F., Andrew R.W., Ashwell R.I.S., Aubin K., Babbage A.K., Bagguley C.L., Bailey J., Beasley H., Bethel G., Bird C.P., Bray-Allen S., Brown J.Y., Brown A.J., Buckley D., Burton J., Bye J., Carder C., Chapman J.C., Clark S.Y., Clarke G., Clee C., Cobley V., Collier R.E., Corby N., Coville G.J., Davies J., Deadman R., Dunn M., Earthrowl M., Ellington A.G., Errington H., Frankish A., Frankland J., French L., Garner P., Garnett J., Gay L., Ghori M.R.J., Gibson R., Gilby L.M., Gillett W., Glithero R.J., Grafham D.V., Griffiths C., Griffiths-Jones S., Grocock R., Hammond S., Harrison E.S.I., Hart E., Haugen E., Heath P.D., Holmes S., Holt K., Howden P.J., Hunt A.R., Hunt S.E., Hunter G., Isherwood J., James R., Johnson C., Johnson D., Joy A., Kay M., Kershaw J.K., Kibukawa M., Kimberley A.M., King A., Knights A.J., Lad H., Laird G., Lawlor S., Leongamornlert D.A., Lloyd D.M., Loveland J., Lovell J., Lush M.J., Lyne R., Martin S., Mashreghi-Mohammadi M., Matthews L., Matthews N.S.W., McLaren S., Milne S., Mistry S., Moore M.J.F., Nickerson T., O'Dell C.N., Oliver K., Palmeiri A., Palmer S.A., Parker A., Patel D., Pearce A.V., Peck A.I., Pelan S., Phelps K., Phillimore B.J., Plumb R., Rajan J., Raymond C., Rouse G., Saenphimmachak C., Sehra H.K., Sheridan E., Shownkeen R., Sims S., Skuce C.D., Smith M., Steward C., Subramanian S., Sycamore N., Tracey A., Tromans A., Van Helmond Z., Wall M., Wallis J.M., White S., Whitehead S.L., Wilkinson J.E., Willey D.L., Williams H., Wilming L., Wray P.W., Wu Z., Coulson A., Vaudin M., Sulston J.E., Durbin R.M., Hubbard T., Wooster R., Dunham I., Carter N.P., McVean G., Ross M.T., Harrow J., Olson M.V., Beck S., Rogers J., Bentley D.R.
Nature 441:315-321(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[4]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2), NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 1-744 (ISOFORM 3), VARIANTS LEU-70 AND VAL-591.
Tissue: Blood and Testis.
[5]"Robust phosphoproteomic profiling of tyrosine phosphorylation sites from human T cells using immobilized metal affinity chromatography and tandem mass spectrometry."
Brill L.M., Salomon A.R., Ficarro S.B., Mukherji M., Stettler-Gill M., Peters E.C.
Anal. Chem. 76:2763-2772(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
Tissue: Leukemic T-cell.
[6]"Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions."
Mayya V., Lundgren D.H., Hwang S.-I., Rezaul K., Wu L., Eng J.K., Rodionov V., Han D.K.
Sci. Signal. 2:RA46-RA46(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-996, MASS SPECTROMETRY.
Tissue: Leukemic T-cell.
[7]"Initial characterization of the human central proteome."
Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P., Buerckstuemmer T., Bennett K.L., Superti-Furga G., Colinge J.
BMC Syst. Biol. 5:17-17(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
[8]"ARHGAP30 is a Wrch-1-interacting protein involved in actin dynamics and cell adhesion."
Naji L., Pacholsky D., Aspenstrom P.
Biochem. Biophys. Res. Commun. 409:96-102(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: FUNCTION, INTERACTION WITH RHOU, SUBCELLULAR LOCATION, ALTERNATIVE SPLICING (ISOFORMS 1 AND 2).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AK160366 mRNA. Translation: BAD18709.1. Different initiation.
BX537846 mRNA. Translation: CAD97855.1.
AL591806 Genomic DNA. Translation: CAI15373.1. Sequence problems.
AL591806 Genomic DNA. Translation: CAI15374.1.
AL591806 Genomic DNA. Translation: CAI15375.1. Sequence problems.
BC043387 mRNA. Translation: AAH43387.1. Sequence problems.
BC053688 mRNA. Translation: AAH53688.1.
IPIIPI00376321.
IPI00619938.
IPI00829903.
IPI00830067.
RefSeqNP_001020769.1. NM_001025598.1.
NP_859071.2. NM_181720.2.
UniGeneHs.389374.

3D structure databases

HSSPHSSP built from PDB template 1XA6 based on UniProtKB P52757.
ProteinModelPortalQ7Z6I6.
SMRQ7Z6I6. Positions 16-217.
ModBaseSearch...

Protein-protein interaction databases

IntActQ7Z6I6. 3 interactions.
STRING9606.ENSP00000356992.

PTM databases

PhosphoSiteQ7Z6I6.

Polymorphism databases

DMDM134035020.

Proteomic databases

PaxDbQ7Z6I6.
PRIDEQ7Z6I6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENST00000368013; ENSP00000356992; ENSG00000186517.
ENST00000368015; ENSP00000356994; ENSG00000186517.
ENST00000368016; ENSP00000356995; ENSG00000186517.
GeneID257106.
KEGGhsa:257106.
UCSCuc001fxk.3. human.
uc001fxl.3. human.

Organism-specific databases

CTD257106.
GeneCardsGC01M161016.
H-InvDBHIX0001227.
HGNCHGNC:27414. ARHGAP30.
HPAHPA036300.
MIM614264. gene.
neXtProtNX_Q7Z6I6.
PharmGKBPA142672585.
GenAtlasSearch...

Phylogenomic databases

eggNOGNOG238609.
HOVERGENHBG093897.
InParanoidQ7Z6I6.
OMAPANPCPR.

Enzyme and pathway databases

ReactomeREACT_111102. Signal Transduction.

Gene expression databases

ArrayExpressQ7Z6I6.
BgeeQ7Z6I6.
CleanExHS_ARHGAP30.
GenevestigatorQ7Z6I6.

Family and domain databases

Gene3D1.10.555.10. 1 hit.
InterProIPR008936. Rho_GTPase_activation_prot.
IPR000198. RhoGAP_dom.
[Graphical view]
PfamPF00620. RhoGAP. 1 hit.
[Graphical view]
SMARTSM00324. RhoGAP. 1 hit.
[Graphical view]
SUPFAMSSF48350. Rho_GAP. 1 hit.
PROSITEPS50238. RHOGAP. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

GenomeRNAi257106.
NextBio92934.
PMAP-CutDBQ7Z6I6.
SOURCESearch...

Entry information

Entry nameRHG30_HUMAN
AccessionPrimary (citable) accession number: Q7Z6I6
Secondary accession number(s): Q5SY52 expand/collapse secondary AC list , Q5SY53, Q5SY54, Q6ZML6, Q7Z3J8, Q86XI7
Entry history
Integrated into UniProtKB/Swiss-Prot: March 20, 2007
Last sequence update: May 31, 2011
Last modified: April 3, 2013
This is version 76 of the entry and version 3 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Relevant documents

Human chromosome 1

Human chromosome 1: entries, gene names and cross-references to MIM

Human entries with polymorphisms or disease mutations

List of human entries with polymorphisms or disease mutations

Human polymorphisms and disease mutations

Index of human polymorphisms and disease mutations

MIM cross-references

Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot

SIMILARITY comments

Index of protein domains and families