Q7Z6I6 (RHG30_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
April 3, 2013.
Version 76.
History...
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Rho GTPase-activating protein 30 Alternative name(s): Rho-type GTPase-activating protein 30 | ||
| Gene names |
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| Organism | Homo sapiens (Human) [Reference proteome] | ||
| Taxonomic identifier | 9606 [NCBI] | ||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 1101 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | GTPase-activating protein (GAP) for RAC1 and RHOA, but not for CDC42. Ref.8 |
| Subunit structure | Interacts with RHOU in a GTP-independent manner. Ref.8 |
| Subcellular location | |
| Sequence similarities | Contains 1 Rho-GAP domain. |
| Sequence caution | The sequence AAH43387.1 differs from that shown. Reason: Contaminating sequence. Potential poly-A sequence. The sequence BAD18709.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened. The sequence CAI15373.1 differs from that shown. Reason: Erroneous gene model prediction. The sequence CAI15375.1 differs from that shown. Reason: Erroneous gene model prediction. |
Ontologies
| Keywords | |
|---|---|
| Cellular component | Cytoplasmic vesicle |
| Coding sequence diversity | Alternative splicing Polymorphism |
| Molecular function | GTPase activation |
| PTM | Phosphoprotein |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological_process | positive regulation of GTPase activity Inferred from electronic annotation. Source: GOC regulation of small GTPase mediated signal transductionTraceable author statement. Source: Reactome small GTPase mediated signal transductionTraceable author statement. Source: Reactome |
| Cellular_component | cytoplasmic membrane-bounded vesicle Inferred from electronic annotation. Source: UniProtKB-SubCell cytosolTraceable author statement. Source: Reactome |
| Molecular_function | GTPase activator activity Inferred from electronic annotation. Source: UniProtKB-KW |
| Complete GO annotation... | |
Alternative products
| This entry describes 4 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q7Z6I6-1) Also known as: L-ARHGAP30; L-30; This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q7Z6I6-2) Also known as: S-ARHGAP30; S-30; The sequence of this isoform differs from the canonical sequence as follows: 679-889: Missing. | ||||||
| Note: No experimental confirmation available. | ||||||
| Isoform 3 (identifier: Q7Z6I6-3) The sequence of this isoform differs from the canonical sequence as follows: 1-148: Missing. | ||||||
| Note: No experimental confirmation available. | ||||||
| Isoform 4 (identifier: Q7Z6I6-4) The sequence of this isoform differs from the canonical sequence as follows: 223-243: GEVESGWRSLPGTRASGSPED → QCPPCPPHIPLLGSQVSYSEP 244-1101: Missing. | ||||||
| Note: No experimental confirmation available. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 1101 | 1101 | Rho GTPase-activating protein 30 | PRO_0000280478 | |||||
Regions | |||||||||
| Domain | 20 – 215 | 196 | Rho-GAP | ||||||
| Compositional bias | 650 – 901 | 252 | Glu-rich | ||||||
Amino acid modifications | |||||||||
| Modified residue | 996 | 1 | Phosphoserine Ref.6 | ||||||
Natural variations | |||||||||
| Alternative sequence | 1 – 148 | 148 | Missing in isoform 3. | VSP_023732 | |||||
| Alternative sequence | 223 – 243 | 21 | GEVES…GSPED → QCPPCPPHIPLLGSQVSYSE P in isoform 4. | VSP_023733 | |||||
| Alternative sequence | 244 – 1101 | 858 | Missing in isoform 4. | VSP_023734 | |||||
| Alternative sequence | 679 – 889 | 211 | Missing in isoform 2. | VSP_023735 | |||||
| Natural variant | 70 | 1 | F → L. Ref.4 Corresponds to variant rs17854839 [ dbSNP | Ensembl ]. | VAR_031157 | |||||
| Natural variant | 591 | 1 | L → V. Ref.2 Ref.4 Corresponds to variant rs3813609 [ dbSNP | Ensembl ]. | VAR_031158 | |||||
Experimental info | |||||||||
| Sequence conflict | 1034 | 1 | S → P in BAD18709. Ref.1 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "The nucleotide sequence of a long cDNA clone isolated from human spleen." Jikuya H., Takano J., Nomura N., Kikuno R., Nagase T., Ohara O. Submitted (APR-2004) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1). Tissue: Spleen. |
| [2] | "The full-ORF clone resource of the German cDNA consortium." Bechtel S., Rosenfelder H., Duda A., Schmidt C.P., Ernst U., Wellenreuther R., Mehrle A., Schuster C., Bahr A., Bloecker H., Heubner D., Hoerlein A., Michel G., Wedler H., Koehrer K., Ottenwaelder B., Poustka A., Wiemann S., Schupp I. BMC Genomics 8:399-399(2007) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 4), VARIANT VAL-591. Tissue: Endometrium. |
| [3] | "The DNA sequence and biological annotation of human chromosome 1." Gregory S.G., Barlow K.F., McLay K.E., Kaul R., Swarbreck D., Dunham A., Scott C.E., Howe K.L., Woodfine K., Spencer C.C.A., Jones M.C., Gillson C., Searle S., Zhou Y., Kokocinski F., McDonald L., Evans R., Phillips K. Bentley D.R.Nature 441:315-321(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [4] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2), NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 1-744 (ISOFORM 3), VARIANTS LEU-70 AND VAL-591. Tissue: Blood and Testis. |
| [5] | "Robust phosphoproteomic profiling of tyrosine phosphorylation sites from human T cells using immobilized metal affinity chromatography and tandem mass spectrometry." Brill L.M., Salomon A.R., Ficarro S.B., Mukherji M., Stettler-Gill M., Peters E.C. Anal. Chem. 76:2763-2772(2004) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. Tissue: Leukemic T-cell. |
| [6] | "Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions." Mayya V., Lundgren D.H., Hwang S.-I., Rezaul K., Wu L., Eng J.K., Rodionov V., Han D.K. Sci. Signal. 2:RA46-RA46(2009) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-996, MASS SPECTROMETRY. Tissue: Leukemic T-cell. |
| [7] | "Initial characterization of the human central proteome." Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P., Buerckstuemmer T., Bennett K.L., Superti-Furga G., Colinge J. BMC Syst. Biol. 5:17-17(2011) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. |
| [8] | "ARHGAP30 is a Wrch-1-interacting protein involved in actin dynamics and cell adhesion." Naji L., Pacholsky D., Aspenstrom P. Biochem. Biophys. Res. Commun. 409:96-102(2011) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION, INTERACTION WITH RHOU, SUBCELLULAR LOCATION, ALTERNATIVE SPLICING (ISOFORMS 1 AND 2). |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AK160366 mRNA. Translation: BAD18709.1. Different initiation. BX537846 mRNA. Translation: CAD97855.1. AL591806 Genomic DNA. Translation: CAI15373.1. Sequence problems. AL591806 Genomic DNA. Translation: CAI15374.1. AL591806 Genomic DNA. Translation: CAI15375.1. Sequence problems. BC043387 mRNA. Translation: AAH43387.1. Sequence problems. BC053688 mRNA. Translation: AAH53688.1. |
| IPI | IPI00376321. IPI00619938. IPI00829903. IPI00830067. |
| RefSeq | NP_001020769.1. NM_001025598.1. NP_859071.2. NM_181720.2. |
| UniGene | Hs.389374. |
3D structure databases | |
| HSSP | HSSP built from PDB template 1XA6 based on UniProtKB P52757. |
| ProteinModelPortal | Q7Z6I6. |
| SMR | Q7Z6I6. Positions 16-217. |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | Q7Z6I6. 3 interactions. |
| STRING | 9606.ENSP00000356992. |
PTM databases | |
| PhosphoSite | Q7Z6I6. |
Polymorphism databases | |
| DMDM | 134035020. |
Proteomic databases | |
| PaxDb | Q7Z6I6. |
| PRIDE | Q7Z6I6. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000368013; ENSP00000356992; ENSG00000186517. ENST00000368015; ENSP00000356994; ENSG00000186517. ENST00000368016; ENSP00000356995; ENSG00000186517. |
| GeneID | 257106. |
| KEGG | hsa:257106. |
| UCSC | uc001fxk.3. human. uc001fxl.3. human. |
Organism-specific databases | |
| CTD | 257106. |
| GeneCards | GC01M161016. |
| H-InvDB | HIX0001227. |
| HGNC | HGNC:27414. ARHGAP30. |
| HPA | HPA036300. |
| MIM | 614264. gene. |
| neXtProt | NX_Q7Z6I6. |
| PharmGKB | PA142672585. |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | NOG238609. |
| HOVERGEN | HBG093897. |
| InParanoid | Q7Z6I6. |
| OMA | PANPCPR. |
Enzyme and pathway databases | |
| Reactome | REACT_111102. Signal Transduction. |
Gene expression databases | |
| ArrayExpress | Q7Z6I6. |
| Bgee | Q7Z6I6. |
| CleanEx | HS_ARHGAP30. |
| Genevestigator | Q7Z6I6. |
Family and domain databases | |
| Gene3D | 1.10.555.10. 1 hit. |
| InterPro | IPR008936. Rho_GTPase_activation_prot. IPR000198. RhoGAP_dom. [Graphical view] |
| Pfam | PF00620. RhoGAP. 1 hit. [Graphical view] |
| SMART | SM00324. RhoGAP. 1 hit. [Graphical view] |
| SUPFAM | SSF48350. Rho_GAP. 1 hit. |
| PROSITE | PS50238. RHOGAP. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| GenomeRNAi | 257106. |
| NextBio | 92934. |
| PMAP-CutDB | Q7Z6I6. |
| SOURCE | Search... |
Entry information
| Entry name | RHG30_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q7Z6I6 Secondary accession number(s): Q5SY52 Q86XI7 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 1 Human chromosome 1: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with
