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Reviewed, UniProtKB/Swiss-Prot Q7Z4B0 (CR020_HUMAN)

Last modified November 24, 2009. Version 36. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Alternative products · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    Uncharacterized protein C18orf20
Gene names
Name: C18orf20
OrganismHomo sapiens (Human) [Complete proteome]
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length112 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at transcript level.

General annotation (Comments)

Subcellular location

Secreted Potential.

Ontologies

Keywords
   Cellular componentSecreted
   Coding sequence diversityAlternative splicing
   DomainSignal
   PTMGlycoprotein
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular componentextracellular region

Inferred from electronic annotation. Source: UniProtKB-SubCell

Complete GO annotation...

Alternative products

This entry describes 2 isoforms produced by alternative splicing. [Align] [Select]
Isoform 1 (identifier: Q7Z4B0-1)

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.
Note: No experimental confirmation available.
Isoform 2 (identifier: Q7Z4B0-2)

The sequence of this isoform differs from the canonical sequence as follows:
     12-26: Missing.
Note: No experimental confirmation available.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2929 Potential
Chain30 – 11283Uncharacterized protein C18orf20
PRO_0000019560

Amino acid modifications

Glycosylation841N-linked (GlcNAc...) Potential

Natural variations

Alternative sequence12 – 2615Missing in isoform 2.
VSP_014651

Sequences

Sequence LengthMass (Da)Tools
Isoform 1 [UniParc].

Last modified October 1, 2003. Version 1.
Checksum: 0566D1566892356D

FASTA11212,600
        10         20         30         40         50         60 
MINLHRLCII HVVATLLSTL LSLISVAISA TCKDEKGKQE METGQQPSGL SATLTKVKCA 

        70         80         90        100        110 
KRQKTVVRVR FYMLSMKNKA CRKNLSKGYN QRPEGSKEES HMVVKEKRKG DH 

« Hide

Isoform 2.

Checksum: B7615B0ACE8CABD2
Show »

FASTA9711,089

References

[1]Shen C., Ke R., Li H., Zhou G., Zheng G., Zhong G., Yu R., Lin L., Yang S.
Submitted (JUL-2003) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
[2]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2).
Tissue: Testis.

Cross-references

Sequence databases

AY336744 mRNA. Translation: AAQ16114.1.
BC029565 mRNA. Translation: AAH29565.1.
IPIIPI00169301.
IPI00607736.
UniGeneHs.567778

3D structure databases

ModBaseSearch...

Genome annotation databases

UCSCuc010dqk.1. human.

Organism-specific databases

GeneCardsGC18M059898.
HGNCHGNC:28597. C18orf20.
PharmGKBPA134905008.
GenAtlasSearch...

Gene expression databases

CleanExHS_C18orf20.
GenevestigatorQ7Z4B0.

Family and domain databases

ProtoNetSearch...

Entry information

Entry nameCR020_HUMAN
AccessionPrimary (citable) accession number: Q7Z4B0
Secondary accession number(s): Q8NHR5
Entry history
Integrated into UniProtKB/Swiss-Prot: July 19, 2005
Last sequence update: October 1, 2003
Last modified: November 24, 2009
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHPI (Human Proteome Initiative)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Relevant documents

Human chromosome 18

Human chromosome 18: entries, gene names and cross-references to MIM

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Alternative products · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents