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Protein

Chitinase 5

Gene

Cht5

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

May function in reproductive organs during embryogenesis and seed maturation.

Catalytic activityi

Random endo-hydrolysis of N-acetyl-beta-D-glucosaminide (1->4)-beta-linkages in chitin and chitodextrins.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosidase, Hydrolase
Biological processCarbohydrate metabolism, Chitin degradation, Plant defense, Polysaccharide degradation
LigandChitin-binding

Protein family/group databases

CAZyiCBM18. Carbohydrate-Binding Module Family 18.
GH19. Glycoside Hydrolase Family 19.

Names & Taxonomyi

Protein namesi
Recommended name:
Chitinase 5 (EC:3.2.1.14)
Alternative name(s):
Class IV chitinase a
Short name:
OsChia4a
Pathogenesis related (PR)-3 chitinase 5
Gene namesi
Name:Cht5
Ordered Locus Names:Os04g0494100, LOC_Os04g41680
ORF Names:OsJ_15308, OSJNBb0091E11.12
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryzaOryza sativa
Proteomesi
  • UP000059680 Componenti: Chromosome 4

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 29Sequence analysisAdd BLAST29
ChainiPRO_000038346430 – 288Chitinase 5Add BLAST259

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Disulfide bondi32 ↔ 40PROSITE-ProRule annotation
Disulfide bondi34 ↔ 46PROSITE-ProRule annotation
Disulfide bondi39 ↔ 53PROSITE-ProRule annotation
Disulfide bondi57 ↔ 62PROSITE-ProRule annotation
Disulfide bondi107 ↔ 156PROSITE-ProRule annotation
Disulfide bondi169 ↔ 178PROSITE-ProRule annotation
Disulfide bondi256 ↔ 288PROSITE-ProRule annotation

Keywords - PTMi

Disulfide bond

Proteomic databases

PaxDbiQ7Y1Z0.
PRIDEiQ7Y1Z0.

Expressioni

Tissue specificityi

Expressed in sheaths and meristems and at lower levels in roots and leaves.1 Publication

Gene expression databases

GenevisibleiQ7Y1Z0. OS.

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os04g41680.1.

Structurei

3D structure databases

ProteinModelPortaliQ7Y1Z0.
SMRiQ7Y1Z0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini30 – 64Chitin-binding type-1PROSITE-ProRule annotationAdd BLAST35

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi64 – 84Poly-GlyAdd BLAST21

Sequence similaritiesi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiKOG4742. Eukaryota.
COG3979. LUCA.
InParanoidiQ7Y1Z0.
KOiK01183.
OMAiAPNSCAG.
OrthoDBiEOG09360MAQ.

Family and domain databases

CDDicd00325. chitinase_glyco_hydro_19. 1 hit.
Gene3Di3.30.60.10. 1 hit.
InterProiView protein in InterPro
IPR001002. Chitin-bd_1.
IPR018371. Chitin-binding_1_CS.
IPR036861. Endochitinase-like_sf.
IPR016283. Glyco_hydro_19.
IPR000726. Glyco_hydro_19_cat.
IPR023346. Lysozyme-like_dom_sf.
PfamiView protein in Pfam
PF00187. Chitin_bind_1. 1 hit.
PF00182. Glyco_hydro_19. 2 hits.
PIRSFiPIRSF001060. Endochitinase. 1 hit.
ProDomiView protein in ProDom or Entries sharing at least one domain
PD000609. Chitin_bd_1. 1 hit.
SMARTiView protein in SMART
SM00270. ChtBD1. 1 hit.
SUPFAMiSSF53955. SSF53955. 1 hit.
SSF57016. SSF57016. 1 hit.
PROSITEiView protein in PROSITE
PS00026. CHIT_BIND_I_1. 1 hit.
PS50941. CHIT_BIND_I_2. 1 hit.
PS00773. CHITINASE_19_1. 1 hit.
PS00774. CHITINASE_19_2. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q7Y1Z0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MANSPTPTML AFLALGLALL LSATGQASAQ NCGCQSNMCC SKWGYCGTGK
60 70 80 90 100
DYCGDGCRSG PCYGGGGGGG GGGGGGGGGG GGSGVSVESV VTEAFFNGIK
110 120 130 140 150
NQAPNGCAGK NFYTRQSFLN AAHSYSGFAR DRTNDDSKRE IAAFFAHVTH
160 170 180 190 200
ETGHMCYINE INGASMDYCD KNNKQWPCQP GKKYYGRGPL QISWNYNYGP
210 220 230 240 250
AGQNIGFDGL RDPDRVAQDP TISFKTALWF WMNNVHQVML QGFGATIRAI
260 270 280
NGALECNGKN PGAVNARVNY YKDYCRQFGV DPGGNLYC
Length:288
Mass (Da):30,487
Last modified:October 1, 2003 - v1
Checksum:iE988A12134910C52
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB096140 mRNA. Translation: BAC76691.1.
AL606629 Genomic DNA. Translation: CAE01675.2.
AP008210 Genomic DNA. Translation: BAF15100.1.
AP014960 Genomic DNA. Translation: BAS89869.1.
CM000141 Genomic DNA. Translation: EEE61251.1.
AK071013 mRNA. Translation: BAG92259.1.
AK104242 mRNA. Translation: BAG96537.1.
AK104426 mRNA. Translation: BAG96672.1.
RefSeqiXP_015636326.1. XM_015780840.1.
UniGeneiOs.10166.

Genome annotation databases

EnsemblPlantsiOS04T0494100-02; OS04T0494100-02; OS04G0494100.
GeneIDi4336265.
GrameneiOS04T0494100-02; OS04T0494100-02; OS04G0494100.
KEGGiosa:4336265.

Similar proteinsi

Entry informationi

Entry nameiCHI5_ORYSJ
AccessioniPrimary (citable) accession number: Q7Y1Z0
Secondary accession number(s): A0A0P0WC98, Q7XT47
Entry historyiIntegrated into UniProtKB/Swiss-Prot: September 22, 2009
Last sequence update: October 1, 2003
Last modified: November 22, 2017
This is version 98 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  3. SIMILARITY comments
    Index of protein domains and families