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Q7XX43 (Q7XX43_ORYSJ) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 66. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
OSJNBa0059D20.6 protein EMBL CAD39763.2
Gene names
Name:OSJNBa0059D20.6 EMBL CAD39763.2
OrganismOryza sativa subsp. japonica (Rice) [Reference proteome]
Taxonomic identifier39947 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Poales › Poaceae › BEP clade › Ehrhartoideae › Oryzeae › Oryza ›

Protein attributes

Sequence length1470 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains 1 reverse transcriptase domain. RuleBase RU000322

Sequences

Sequence LengthMass (Da)Tools
Q7XX43 [UniParc].

Last modified March 1, 2004. Version 2.
Checksum: 3D0A07493E93252C

FASTA1,470168,961
        10         20         30         40         50         60 
MASRRRATTS NDETQTPDLN TLAGIMATQT QLLQAIASNQ GNRGGSSFGE FMRTKPPTFA 

        70         80         90        100        110        120 
TAEEPMDAED WLRIIEKKLT LVRVREADKV IFAANQLEGP AGDWWDTYKE AREEDAGEPN 

       130        140        150        160        170        180 
WEEFTTAFRD NFVPAAVMRM KKNEFRKLRQ GNTTVQEYLN RFTQLARYAT RDLADEEEKI 

       190        200        210        220        230        240 
DKFIEGLNDE LRGPMIGQDH DSFQSLINKV VRLENDRKVV EHNRKRRLAM NRPPQTAPQR 

       250        260        270        280        290        300 
PKGTTPSAWR PTVVTTSRPA ASSNFHRPVT IQNRAPTPNQ AATGSVRPGS CFNCGEYGHF 

       310        320        330        340        350        360 
ANKCPHPNKT PIRTGANATA IHGTATPAAG RGLFRTPQTN RTATGFGRGQ VNHVRAEEAQ 

       370        380        390        400        410        420 
EDQGVLMGMF SLNSTPVKVL FDSGASHSFI SLKASQQHNL TRVKLRQPML VHSPGGEIAV 

       430        440        450        460        470        480 
DTACIDVPIR LRDVVFPSNL MVLIPQTLDV ILGMDWLAKH RGVIDCRRRE VTLTTPWGSD 

       490        500        510        520        530        540 
MRATMDQDPR LTERAGGIFT MLPLKGMPIV QRFPDVFPED LPGMPPDRDI EFIIDLIPGT 

       550        560        570        580        590        600 
APISKRPYRM PVNELEELKK QIRELQEKGF VRPSSSPWGA QVLFVKKKDG SMRMCVDYRS 

       610        620        630        640        650        660 
LNEVTIKNKY PLPRIDNLFD QLKGAKVFSK IDLRSGYHQL KIRTEDIPKT AFSTRYGLYE 

       670        680        690        700        710        720 
FTVMSFGLTN APAYFMNLMN KVFMEYLDKF VVVFIDDILI YSKDEEEHAE HLRLVLQKLR 

       730        740        750        760        770        780 
KHKLYAKFSK CEFWLKEVAF LGHVISAGGV AVDPAKVEAV TEWKAPKSVT EIRSFLGLAR 

       790        800        810        820        830        840 
YYRRFIEGFS KIARPMTQLL KKEKKFVWSE QCQESFEQLK EKLTSAPILV LPDIRKDFVI 

       850        860        870        880        890        900 
YCDASRQGLG GVLMQDGKVV AYASRQLRPH EENYPTHDLE LAAVVHALKI WRHYLIGNHC 

       910        920        930        940        950        960 
DIYTDHKSLK YIFTQSDLNL RQRRWLELIK DYDLEVHYHP GKANVVADAL SRKIHCNHLR 

       970        980        990       1000       1010       1020 
MEGMVPELRE EIAQLNLHIV PRGQINTLDI QPLLRTQIEE AQKDNEEVRE VKERLAAGRA 

      1030       1040       1050       1060       1070       1080 
KEFSTDEKDV LWYKKRIYVP EQGGLRGLIL KEAHESAYSL HPGSTKMYQD LKEGYWWPNM 

      1090       1100       1110       1120       1130       1140 
KRDVAEYVAL CDVCQKVKAE HQRPAGLLQP LRIPEWKWDE IGMDFIVGLP KTATGYDSIW 

      1150       1160       1170       1180       1190       1200 
VIVDRLTKTA RFIPVKTNYS SAKLAELYMT RIVCLHGVPK KIISDRGTQF TSHFWEKVHE 

      1210       1220       1230       1240       1250       1260 
ALGSYLAFST AYHPQTDGQT ERTNQVLEDM LRACALDFSK DWERCLPYAE FSYNNSFQAS 

      1270       1280       1290       1300       1310       1320 
LKMSPNEALF GRRCRTPLMW SETGERAVFG PDIIQEAEEK VRLIRDRLKI AQSRQKSYAD 

      1330       1340       1350       1360       1370       1380 
TRRRNLEFKE GDYIYLKVSP MRGTKRFKVK GKLAPRYVGP FQIIARRGEV AYQLQLPENI 

      1390       1400       1410       1420       1430       1440 
ADVHPVFHVS QLKKCLRVPE EQAPLEEVHI SNDLTYPEHP IRILDEAAKR TRSKVWRMYK 

      1450       1460       1470 
VQWSNHTEEE ATWESEEFLR TEYPHLFEDW

« Hide

References

« Hide 'large scale' references
[1]"The map-based sequence of the rice genome."
International rice genome sequencing project (IRGSP)
Nature 436:793-800(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[2]"The rice annotation project database (RAP-DB): 2008 update."
The rice annotation project (RAP)
Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: cv. Nipponbare.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AL606997 Genomic DNA. Translation: CAD39763.2.
UniGeneOs.99128.

3D structure databases

ProteinModelPortalQ7XX43.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsLOC_Os04g11310.1; LOC_Os04g11310.1; LOC_Os04g11310.

Organism-specific databases

GrameneQ7XX43.

Phylogenomic databases

HOGENOMHOG000078643.

Family and domain databases

Gene3D4.10.60.10. 1 hit.
InterProIPR023780. Chromo_domain.
IPR000953. Chromo_domain/shadow.
IPR016197. Chromodomain-like.
IPR001584. Integrase_cat-core.
IPR021109. Peptidase_aspartic.
IPR001969. Peptidase_aspartic_AS.
IPR005162. Retrotrans_gag.
IPR012337. RNaseH-like_dom.
IPR013242. RVP_2.
IPR000477. RVT.
IPR001878. Znf_CCHC.
[Graphical view]
PfamPF00385. Chromo. 1 hit.
PF03732. Retrotrans_gag. 1 hit.
PF00665. rve. 1 hit.
PF08284. RVP_2. 1 hit.
PF00078. RVT_1. 1 hit.
PF00098. zf-CCHC. 1 hit.
[Graphical view]
SMARTSM00343. ZnF_C2HC. 1 hit.
[Graphical view]
SUPFAMSSF54160. Chromodomain-like. 1 hit.
SSF50630. Pept_Aspartic. 1 hit.
SSF53098. RNaseH_fold. 1 hit.
SSF57756. SSF57756. 1 hit.
PROSITEPS00141. ASP_PROTEASE. 1 hit.
PS50013. CHROMO_2. 1 hit.
PS50994. INTEGRASE. 1 hit.
PS50878. RT_POL. 1 hit.
PS50158. ZF_CCHC. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ7XX43_ORYSJ
AccessionPrimary (citable) accession number: Q7XX43
Entry history
Integrated into UniProtKB/TrEMBL: October 1, 2003
Last sequence update: March 1, 2004
Last modified: May 29, 2013
This is version 66 of the entry and version 2 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info