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Q7XW27 (P2C38_ORYSJ) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 66. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Probable protein phosphatase 2C 38

Short name=OsPP2C38
EC=3.1.3.16
Gene names
Ordered Locus Names:Os04g0321800, LOC_Os04g25570
ORF Names:OSJNBb0062H02.4
OrganismOryza sativa subsp. japonica (Rice) [Reference proteome]
Taxonomic identifier39947 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza

Protein attributes

Sequence length460 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Catalytic activity

[a protein]-serine/threonine phosphate + H2O = [a protein]-serine/threonine + phosphate.

Cofactor

Binds 2 magnesium or manganese ions per subunit By similarity.

Sequence similarities

Belongs to the PP2C family.

Contains 1 PP2C-like domain.

Sequence caution

The sequence AK071295 differs from that shown. Reason: Sequencing errors.

Ontologies

Keywords
   LigandMagnesium
Manganese
Metal-binding
   Molecular functionHydrolase
Protein phosphatase
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processprotein dephosphorylation

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

   Cellular_componentnucleus

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

plasma membrane

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

   Molecular_functionmetal ion binding

Inferred from electronic annotation. Source: UniProtKB-KW

phosphoprotein phosphatase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 460460Probable protein phosphatase 2C 38
PRO_0000363285

Regions

Domain117 – 417301PP2C-like
Compositional bias45 – 517Poly-Gly
Compositional bias86 – 905Poly-Arg
Compositional bias93 – 997Poly-Ser

Sites

Metal binding1541Manganese 1 By similarity
Metal binding1541Manganese 2 By similarity
Metal binding1551Manganese 1; via carbonyl oxygen By similarity
Metal binding3771Manganese 2 By similarity
Metal binding4231Manganese 2 By similarity

Sequences

Sequence LengthMass (Da)Tools
Q7XW27 [UniParc].

Last modified March 1, 2004. Version 2.
Checksum: 40B7D9A4A8E6820C

FASTA46049,687
        10         20         30         40         50         60 
MVAVTGGRPP GLQDAPGAPP PAPAAEAVPS RPLARDATYG GRVYGGVGGG GCCLEFLDCV 

        70         80         90        100        110        120 
LRAMGVATPA EIMPPADFRW AARPMRRRRR GGSSSSSSSP RDREPRDGRI AANGASAAAS 

       130        140        150        160        170        180 
LYTMRGNKGV NQDAMLVWEN FCSKEDTIFC GVFDGHGPYG HLVSKRVRDL LPIKLSANLG 

       190        200        210        220        230        240 
RDGHKETSTN IVTSSMTEGG GTERMDRDTE TPLGTEENGD YPEMFAALRT SLLRAFYVMD 

       250        260        270        280        290        300 
RDLKFHKTID SVFSGTTAVT VIKQGHDLLI GNLGDSRAVL GTRDEYDQFF AVQLTVDLKP 

       310        320        330        340        350        360 
TIPSEAARIR ERSGRIFSLP DEPDVARVWL PKYNMPGLAM ARAFGDFCLK DYGLISMPDV 

       370        380        390        400        410        420 
SYHRITEKDE FVVLATDGVW DVLSNSEVVS IVSQAKSEAS AARFVVESAQ RAWRTRFPTS 

       430        440        450        460 
KIDDCAVVCL FLNTDARNKP PGSGIKDLAN AIELGGGNLS 

« Hide

References

« Hide 'large scale' references
[1]"Sequence and analysis of rice chromosome 4."
Feng Q., Zhang Y., Hao P., Wang S., Fu G., Huang Y., Li Y., Zhu J., Liu Y., Hu X., Jia P., Zhang Y., Zhao Q., Ying K., Yu S., Tang Y., Weng Q., Zhang L. expand/collapse author list , Lu Y., Mu J., Lu Y., Zhang L.S., Yu Z., Fan D., Liu X., Lu T., Li C., Wu Y., Sun T., Lei H., Li T., Hu H., Guan J., Wu M., Zhang R., Zhou B., Chen Z., Chen L., Jin Z., Wang R., Yin H., Cai Z., Ren S., Lv G., Gu W., Zhu G., Tu Y., Jia J., Zhang Y., Chen J., Kang H., Chen X., Shao C., Sun Y., Hu Q., Zhang X., Zhang W., Wang L., Ding C., Sheng H., Gu J., Chen S., Ni L., Zhu F., Chen W., Lan L., Lai Y., Cheng Z., Gu M., Jiang J., Li J., Hong G., Xue Y., Han B.
Nature 420:316-320(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[2]"The map-based sequence of the rice genome."
International rice genome sequencing project (IRGSP)
Nature 436:793-800(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[3]"The rice annotation project database (RAP-DB): 2008 update."
The rice annotation project (RAP)
Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: cv. Nipponbare.
[4]"Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
The rice full-length cDNA consortium
Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: cv. Nipponbare.
[5]"Genome-wide and expression analysis of protein phosphatase 2C in rice and Arabidopsis."
Xue T., Wang D., Zhang S., Ehlting J., Ni F., Jacab S., Zheng C., Zhong Y.
BMC Genomics 9:550-550(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: GENE FAMILY, NOMENCLATURE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AL663005 Genomic DNA. Translation: CAD40291.2.
AP008210 Genomic DNA. Translation: BAF14379.1.
AK071295 mRNA. No translation available.
RefSeqNP_001052465.1. NM_001059000.1.
UniGeneOs.52757.

3D structure databases

ProteinModelPortalQ7XW27.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING39947.LOC_Os04g25570.1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsOS04T0321800-02; OS04T0321800-02; OS04G0321800.
GeneID4335480.
KEGGosa:4335480.

Organism-specific databases

GrameneQ7XW27.

Phylogenomic databases

eggNOGCOG0631.
OMANTNDVAS.
ProtClustDBCLSN2692729.

Family and domain databases

Gene3D3.60.40.10. 1 hit.
InterProIPR001932. PP2C-like_dom.
IPR015655. Protein_Pase_2C.
[Graphical view]
PANTHERPTHR13832. PTHR13832. 1 hit.
PfamPF00481. PP2C. 1 hit.
[Graphical view]
SMARTSM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view]
SUPFAMSSF81606. SSF81606. 2 hits.
ProtoNetSearch...

Entry information

Entry nameP2C38_ORYSJ
AccessionPrimary (citable) accession number: Q7XW27
Entry history
Integrated into UniProtKB/Swiss-Prot: February 10, 2009
Last sequence update: March 1, 2004
Last modified: April 16, 2014
This is version 66 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Oryza sativa (rice)

Index of Oryza sativa entries and their corresponding gene designations