Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Q7XVF9

- P2C39_ORYSJ

UniProt

Q7XVF9 - P2C39_ORYSJ

Protein

Probable protein phosphatase 2C 39

Gene

Os04g0403701

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 66 (01 Oct 2014)
      Sequence version 2 (01 Mar 2004)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    Catalytic activityi

    [a protein]-serine/threonine phosphate + H2O = [a protein]-serine/threonine + phosphate.

    Cofactori

    Binds 2 magnesium or manganese ions per subunit.By similarity

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Metal bindingi195 – 1951Manganese 1By similarity
    Metal bindingi195 – 1951Manganese 2By similarity
    Metal bindingi196 – 1961Manganese 1; via carbonyl oxygenBy similarity
    Metal bindingi435 – 4351Manganese 2By similarity
    Metal bindingi498 – 4981Manganese 2By similarity

    GO - Molecular functioni

    1. metal ion binding Source: UniProtKB-KW
    2. phosphoprotein phosphatase activity Source: UniProtKB-KW

    Keywords - Molecular functioni

    Hydrolase, Protein phosphatase

    Keywords - Ligandi

    Magnesium, Manganese, Metal-binding

    Protein family/group databases

    CAZyiGH13. Glycoside Hydrolase Family 13.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Probable protein phosphatase 2C 39 (EC:3.1.3.16)
    Short name:
    OsPP2C39
    Gene namesi
    Ordered Locus Names:Os04g0403701, LOC_Os04g33080
    ORF Names:OJ000315_02.1, OsJ_014105, OSJNBb0118P14.8
    OrganismiOryza sativa subsp. japonica (Rice)
    Taxonomic identifieri39947 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
    ProteomesiUP000000763: Chromosome 4

    Organism-specific databases

    GrameneiQ7XVF9.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 520520Probable protein phosphatase 2C 39PRO_0000363286Add
    BLAST

    Structurei

    3D structure databases

    ProteinModelPortaliQ7XVF9.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini154 – 483330PP2C-likeAdd
    BLAST

    Sequence similaritiesi

    Belongs to the PP2C family.Curated
    Contains 1 PP2C-like domain.Curated

    Phylogenomic databases

    eggNOGiCOG0631.
    HOGENOMiHOG000240776.
    OMAiENPLEYQ.

    Family and domain databases

    Gene3Di3.60.40.10. 2 hits.
    InterProiIPR001932. PP2C-like_dom.
    IPR015655. Protein_Pase_2C.
    [Graphical view]
    PANTHERiPTHR13832. PTHR13832. 1 hit.
    PfamiPF00481. PP2C. 1 hit.
    [Graphical view]
    SMARTiSM00332. PP2Cc. 1 hit.
    [Graphical view]
    SUPFAMiSSF81606. SSF81606. 2 hits.

    Sequencei

    Sequence statusi: Complete.

    Q7XVF9-1 [UniParc]FASTAAdd to Basket

    « Hide

    MVDEELFDKS SNDHSISSEE EDMLVRSYSN LNVSFGYHCN SYQCFSLDTD    50
    EYDISPNKRL ETNTMMTSQN GSFTCLSGAA ISANFTLANT NICKGLIGEE 100
    ILPELDSPNS FRKIVSSPSM SRLDLLSTSQ GSPVSTESSI FEISKNIWRS 150
    SAPTTVSSNF LTSTEIKMAG GAAGEDRVQA VCSEKNGWLI CGIYDGFNGR 200
    DAADFLAVTL YDNIVYYLYL LECRIKQENG LYGSPEGSLN GVKSELTLAM 250
    RFAENEDVKF SETFRAGVLK CLTTAVEQAE NDFLCMVEQE MDDRPDLVSV 300
    GSCVLVVLLH GTDLCILNLG DSRAVLASVP SSGMDKLKAV QLTEIHSLEN 350
    PLEYQKLLAD HPNEPSVVMG NKIKGKLKVT RAFGVGYLKQ KKLNDALMGI 400
    LRVRNLCSPP YVYTNPHTVS HKVTEDDLFV VLGSDGLFDF FSNDEVVQLV 450
    YQFMHDNPIG DPAKYLIEQL LLKAAKEAAL TAEELMRIPV GSRRKYHDDV 500
    TIIVIILGNA QRTMTASTSL 520
    Length:520
    Mass (Da):57,320
    Last modified:March 1, 2004 - v2
    Checksum:iCCBCB18D3B94E4DB
    GO

    Sequence cautioni

    The sequence BAF14614.2 differs from that shown. Reason: Erroneous gene model prediction.

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL607005 Genomic DNA. Translation: CAD40677.2.
    AL731639 Genomic DNA. Translation: CAE05356.1.
    AP008210 Genomic DNA. Translation: BAF14614.2. Sequence problems.
    CM000141 Genomic DNA. Translation: EAZ30622.1.
    AK243107 mRNA. Translation: BAH01452.1.
    RefSeqiNP_001052700.2. NM_001059235.2.
    UniGeneiOs.12150.

    Genome annotation databases

    EnsemblPlantsiOS04T0403701-01; OS04T0403701-01; OS04G0403701.
    GeneIDi4335740.
    KEGGiosa:4335740.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL607005 Genomic DNA. Translation: CAD40677.2 .
    AL731639 Genomic DNA. Translation: CAE05356.1 .
    AP008210 Genomic DNA. Translation: BAF14614.2 . Sequence problems.
    CM000141 Genomic DNA. Translation: EAZ30622.1 .
    AK243107 mRNA. Translation: BAH01452.1 .
    RefSeqi NP_001052700.2. NM_001059235.2.
    UniGenei Os.12150.

    3D structure databases

    ProteinModelPortali Q7XVF9.
    ModBasei Search...
    MobiDBi Search...

    Protein family/group databases

    CAZyi GH13. Glycoside Hydrolase Family 13.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi OS04T0403701-01 ; OS04T0403701-01 ; OS04G0403701 .
    GeneIDi 4335740.
    KEGGi osa:4335740.

    Organism-specific databases

    Gramenei Q7XVF9.

    Phylogenomic databases

    eggNOGi COG0631.
    HOGENOMi HOG000240776.
    OMAi ENPLEYQ.

    Family and domain databases

    Gene3Di 3.60.40.10. 2 hits.
    InterProi IPR001932. PP2C-like_dom.
    IPR015655. Protein_Pase_2C.
    [Graphical view ]
    PANTHERi PTHR13832. PTHR13832. 1 hit.
    Pfami PF00481. PP2C. 1 hit.
    [Graphical view ]
    SMARTi SM00332. PP2Cc. 1 hit.
    [Graphical view ]
    SUPFAMi SSF81606. SSF81606. 2 hits.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    3. "The rice annotation project database (RAP-DB): 2008 update."
      The rice annotation project (RAP)
      Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENOME REANNOTATION.
      Strain: cv. Nipponbare.
    4. "The genomes of Oryza sativa: a history of duplications."
      Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.
      , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.
      PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    5. "Oryza sativa full length cDNA."
      The rice full-length cDNA consortium
      Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: cv. Nipponbare.
    6. "Genome-wide and expression analysis of protein phosphatase 2C in rice and Arabidopsis."
      Xue T., Wang D., Zhang S., Ehlting J., Ni F., Jacab S., Zheng C., Zhong Y.
      BMC Genomics 9:550-550(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENE FAMILY, NOMENCLATURE.

    Entry informationi

    Entry nameiP2C39_ORYSJ
    AccessioniPrimary (citable) accession number: Q7XVF9
    Secondary accession number(s): Q0JDH3
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: February 10, 2009
    Last sequence update: March 1, 2004
    Last modified: October 1, 2014
    This is version 66 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Oryza sativa (rice)
      Index of Oryza sativa entries and their corresponding gene designations
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3