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Q7XUK4

- GUN12_ORYSJ

UniProt

Q7XUK4 - GUN12_ORYSJ

Protein

Endoglucanase 12

Gene

GLU3

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 70 (01 Oct 2014)
      Sequence version 2 (01 Mar 2004)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Endohydrolysis of (1->4)-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei513 – 5131By similarity
    Active sitei561 – 5611By similarity
    Active sitei570 – 5701By similarity

    GO - Molecular functioni

    1. cellulase activity Source: UniProtKB-EC

    GO - Biological processi

    1. cellulose catabolic process Source: UniProtKB-KW

    Keywords - Molecular functioni

    Glycosidase, Hydrolase

    Keywords - Biological processi

    Carbohydrate metabolism, Cell wall biogenesis/degradation, Cellulose degradation, Polysaccharide degradation

    Protein family/group databases

    CAZyiGH9. Glycoside Hydrolase Family 9.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Endoglucanase 12 (EC:3.2.1.4)
    Alternative name(s):
    Endo-1,4-beta glucanase 12
    OsGLU3
    Gene namesi
    Name:GLU3
    Ordered Locus Names:Os04g0497200, LOC_Os04g41970
    ORF Names:OSJNBa0067K08.14
    OrganismiOryza sativa subsp. japonica (Rice)
    Taxonomic identifieri39947 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
    ProteomesiUP000000763: Chromosome 4

    Organism-specific databases

    GrameneiQ7XUK4.

    Subcellular locationi

    GO - Cellular componenti

    1. integral component of membrane Source: UniProtKB-KW

    Keywords - Cellular componenti

    Membrane

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 623623Endoglucanase 12PRO_0000249289Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Glycosylationi217 – 2171N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi236 – 2361N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi324 – 3241N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi345 – 3451N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi408 – 4081N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi425 – 4251N-linked (GlcNAc...)Sequence Analysis

    Keywords - PTMi

    Glycoprotein

    Proteomic databases

    PRIDEiQ7XUK4.

    Expressioni

    Tissue specificityi

    Ubiquitous.1 Publication

    Structurei

    3D structure databases

    ProteinModelPortaliQ7XUK4.
    ModBaseiSearch...
    MobiDBiSearch...

    Topological domain

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Topological domaini1 – 7373CytoplasmicSequence AnalysisAdd
    BLAST
    Topological domaini95 – 623529ExtracellularSequence AnalysisAdd
    BLAST

    Transmembrane

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Transmembranei74 – 9421Helical; Signal-anchor for type II membrane proteinSequence AnalysisAdd
    BLAST

    Family & Domainsi

    Sequence similaritiesi

    Keywords - Domaini

    Signal-anchor, Transmembrane, Transmembrane helix

    Phylogenomic databases

    eggNOGiNOG307789.
    HOGENOMiHOG000021033.
    OMAiQCASAST.

    Family and domain databases

    Gene3Di1.50.10.10. 1 hit.
    InterProiIPR008928. 6-hairpin_glycosidase-like.
    IPR012341. 6hp_glycosidase.
    IPR001701. Glyco_hydro_9.
    IPR018221. Glyco_hydro_9_AS.
    [Graphical view]
    PfamiPF00759. Glyco_hydro_9. 1 hit.
    [Graphical view]
    SUPFAMiSSF48208. SSF48208. 1 hit.
    PROSITEiPS00592. GLYCOSYL_HYDROL_F9_1. 1 hit.
    PS00698. GLYCOSYL_HYDROL_F9_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q7XUK4-1 [UniParc]FASTAAdd to Basket

    « Hide

    MYSANHWGGS FEIAADGAAE DDHSRNMDLD RGALSARQHQ LDETQQSWLL    50
    GPPEAKKKDK YVDLGCVVVK RKLLWWVLWT LLAAFILIGL PVIIAKSIPK 100
    KKPHAPPPDQ YTDALHKALL FFNAQKSGRL PKNNGIKWRG NSGLSDGSDL 150
    TDVKGGLVGG YYDAGDNIKF HFPLAFSMTM LSWSVIEYSA KYKAVGEYDH 200
    VRELIKWGTD YLLLTFNSSA STIDKVYSQV GIAKINGTQP DDHYCWNRPE 250
    DMAYPRPVQT AGSAPDLGGE MAAALAAASI VFRDNAAYSK KLVNGAAAVY 300
    KFARSSGRRT PYSRGNQYIE YYYNSTSYWD EYMWSAAWMY YATGNNTYIT 350
    FATDPRLPKN AKAFYSILDF SVFSWDNKLP GAELLLSRLR MFLNPGYPYE 400
    ESLIGYHNTT SMNMCTYFPR FGAFNFTKGG LAQFNHGKGQ PLQYTVANSF 450
    LAALYADYME SVNVPGWYCG PYFMTVDDLR SFARSQVNYI LGDNPKKMSY 500
    VVGYGKKYPR RLHHRGASTP HNGIKYSCTG GYKWRDTKGA DPNVLVGAMV 550
    GGPDKNDQFK DARLTYAQNE PTLVGNAGLV AALVALTNSG RGAGVTAVDK 600
    NTMFSAVPPM FPATPPPPSK WKP 623
    Length:623
    Mass (Da):69,243
    Last modified:March 1, 2004 - v2
    Checksum:iBAEF21481AEF18B2
    GO

    Sequence cautioni

    The sequence BAF15118.2 differs from that shown. Reason: Erroneous gene model prediction.

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL606627 Genomic DNA. Translation: CAD41250.2.
    AP008210 Genomic DNA. Translation: BAF15118.2. Sequence problems.
    AK243593 mRNA. No translation available.
    RefSeqiNP_001053204.2. NM_001059739.2.
    UniGeneiOs.49714.
    Os.58516.

    Genome annotation databases

    EnsemblPlantsiOS04T0497200-01; OS04T0497200-01; OS04G0497200.
    GeneIDi4336284.
    KEGGiosa:4336284.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL606627 Genomic DNA. Translation: CAD41250.2 .
    AP008210 Genomic DNA. Translation: BAF15118.2 . Sequence problems.
    AK243593 mRNA. No translation available.
    RefSeqi NP_001053204.2. NM_001059739.2.
    UniGenei Os.49714.
    Os.58516.

    3D structure databases

    ProteinModelPortali Q7XUK4.
    ModBasei Search...
    MobiDBi Search...

    Protein family/group databases

    CAZyi GH9. Glycoside Hydrolase Family 9.

    Proteomic databases

    PRIDEi Q7XUK4.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi OS04T0497200-01 ; OS04T0497200-01 ; OS04G0497200 .
    GeneIDi 4336284.
    KEGGi osa:4336284.

    Organism-specific databases

    Gramenei Q7XUK4.

    Phylogenomic databases

    eggNOGi NOG307789.
    HOGENOMi HOG000021033.
    OMAi QCASAST.

    Family and domain databases

    Gene3Di 1.50.10.10. 1 hit.
    InterProi IPR008928. 6-hairpin_glycosidase-like.
    IPR012341. 6hp_glycosidase.
    IPR001701. Glyco_hydro_9.
    IPR018221. Glyco_hydro_9_AS.
    [Graphical view ]
    Pfami PF00759. Glyco_hydro_9. 1 hit.
    [Graphical view ]
    SUPFAMi SSF48208. SSF48208. 1 hit.
    PROSITEi PS00592. GLYCOSYL_HYDROL_F9_1. 1 hit.
    PS00698. GLYCOSYL_HYDROL_F9_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    3. "The rice annotation project database (RAP-DB): 2008 update."
      The rice annotation project (RAP)
      Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENOME REANNOTATION.
      Strain: cv. Nipponbare.
    4. "Oryza sativa full length cDNA."
      The rice full-length cDNA consortium
      Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: cv. Nipponbare.
    5. "OsGLU1, a putative membrane-bound endo-1,4-beta-D-glucanase from rice, affects plant internode elongation."
      Zhou H.-L., He S.-J., Cao Y.-R., Chen T., Du B.-X., Chu C.-C., Zhang J.-S., Chen S.-Y.
      Plant Mol. Biol. 60:137-151(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: TISSUE SPECIFICITY.

    Entry informationi

    Entry nameiGUN12_ORYSJ
    AccessioniPrimary (citable) accession number: Q7XUK4
    Secondary accession number(s): Q0JC19
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: September 5, 2006
    Last sequence update: March 1, 2004
    Last modified: October 1, 2014
    This is version 70 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Glycosyl hydrolases
      Classification of glycosyl hydrolase families and list of entries
    2. Oryza sativa (rice)
      Index of Oryza sativa entries and their corresponding gene designations
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3