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Q7XUK4 (GUN12_ORYSJ) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 69. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Endoglucanase 12

EC=3.2.1.4
Alternative name(s):
Endo-1,4-beta glucanase 12
OsGLU3
Gene names
Name:GLU3
Ordered Locus Names:Os04g0497200, LOC_Os04g41970
ORF Names:OSJNBa0067K08.14
OrganismOryza sativa subsp. japonica (Rice) [Reference proteome]
Taxonomic identifier39947 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza

Protein attributes

Sequence length623 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Catalytic activity

Endohydrolysis of (1->4)-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.

Subcellular location

Membrane; Single-pass type II membrane protein Potential.

Tissue specificity

Ubiquitous. Ref.5

Sequence similarities

Belongs to the glycosyl hydrolase 9 (cellulase E) family.

Sequence caution

The sequence BAF15118.2 differs from that shown. Reason: Erroneous gene model prediction.

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 623623Endoglucanase 12
PRO_0000249289

Regions

Topological domain1 – 7373Cytoplasmic Potential
Transmembrane74 – 9421Helical; Signal-anchor for type II membrane protein; Potential
Topological domain95 – 623529Extracellular Potential

Sites

Active site5131 By similarity
Active site5611 By similarity
Active site5701 By similarity

Amino acid modifications

Glycosylation2171N-linked (GlcNAc...) Potential
Glycosylation2361N-linked (GlcNAc...) Potential
Glycosylation3241N-linked (GlcNAc...) Potential
Glycosylation3451N-linked (GlcNAc...) Potential
Glycosylation4081N-linked (GlcNAc...) Potential
Glycosylation4251N-linked (GlcNAc...) Potential

Sequences

Sequence LengthMass (Da)Tools
Q7XUK4 [UniParc].

Last modified March 1, 2004. Version 2.
Checksum: BAEF21481AEF18B2

FASTA62369,243
        10         20         30         40         50         60 
MYSANHWGGS FEIAADGAAE DDHSRNMDLD RGALSARQHQ LDETQQSWLL GPPEAKKKDK 

        70         80         90        100        110        120 
YVDLGCVVVK RKLLWWVLWT LLAAFILIGL PVIIAKSIPK KKPHAPPPDQ YTDALHKALL 

       130        140        150        160        170        180 
FFNAQKSGRL PKNNGIKWRG NSGLSDGSDL TDVKGGLVGG YYDAGDNIKF HFPLAFSMTM 

       190        200        210        220        230        240 
LSWSVIEYSA KYKAVGEYDH VRELIKWGTD YLLLTFNSSA STIDKVYSQV GIAKINGTQP 

       250        260        270        280        290        300 
DDHYCWNRPE DMAYPRPVQT AGSAPDLGGE MAAALAAASI VFRDNAAYSK KLVNGAAAVY 

       310        320        330        340        350        360 
KFARSSGRRT PYSRGNQYIE YYYNSTSYWD EYMWSAAWMY YATGNNTYIT FATDPRLPKN 

       370        380        390        400        410        420 
AKAFYSILDF SVFSWDNKLP GAELLLSRLR MFLNPGYPYE ESLIGYHNTT SMNMCTYFPR 

       430        440        450        460        470        480 
FGAFNFTKGG LAQFNHGKGQ PLQYTVANSF LAALYADYME SVNVPGWYCG PYFMTVDDLR 

       490        500        510        520        530        540 
SFARSQVNYI LGDNPKKMSY VVGYGKKYPR RLHHRGASTP HNGIKYSCTG GYKWRDTKGA 

       550        560        570        580        590        600 
DPNVLVGAMV GGPDKNDQFK DARLTYAQNE PTLVGNAGLV AALVALTNSG RGAGVTAVDK 

       610        620 
NTMFSAVPPM FPATPPPPSK WKP 

« Hide

References

« Hide 'large scale' references
[1]"Sequence and analysis of rice chromosome 4."
Feng Q., Zhang Y., Hao P., Wang S., Fu G., Huang Y., Li Y., Zhu J., Liu Y., Hu X., Jia P., Zhang Y., Zhao Q., Ying K., Yu S., Tang Y., Weng Q., Zhang L. expand/collapse author list , Lu Y., Mu J., Lu Y., Zhang L.S., Yu Z., Fan D., Liu X., Lu T., Li C., Wu Y., Sun T., Lei H., Li T., Hu H., Guan J., Wu M., Zhang R., Zhou B., Chen Z., Chen L., Jin Z., Wang R., Yin H., Cai Z., Ren S., Lv G., Gu W., Zhu G., Tu Y., Jia J., Zhang Y., Chen J., Kang H., Chen X., Shao C., Sun Y., Hu Q., Zhang X., Zhang W., Wang L., Ding C., Sheng H., Gu J., Chen S., Ni L., Zhu F., Chen W., Lan L., Lai Y., Cheng Z., Gu M., Jiang J., Li J., Hong G., Xue Y., Han B.
Nature 420:316-320(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[2]"The map-based sequence of the rice genome."
International rice genome sequencing project (IRGSP)
Nature 436:793-800(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[3]"The rice annotation project database (RAP-DB): 2008 update."
The rice annotation project (RAP)
Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: cv. Nipponbare.
[4]"Oryza sativa full length cDNA."
The rice full-length cDNA consortium
Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: cv. Nipponbare.
[5]"OsGLU1, a putative membrane-bound endo-1,4-beta-D-glucanase from rice, affects plant internode elongation."
Zhou H.-L., He S.-J., Cao Y.-R., Chen T., Du B.-X., Chu C.-C., Zhang J.-S., Chen S.-Y.
Plant Mol. Biol. 60:137-151(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: TISSUE SPECIFICITY.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AL606627 Genomic DNA. Translation: CAD41250.2.
AP008210 Genomic DNA. Translation: BAF15118.2. Sequence problems.
AK243593 mRNA. No translation available.
RefSeqNP_001053204.2. NM_001059739.2.
UniGeneOs.49714.
Os.58516.

3D structure databases

ProteinModelPortalQ7XUK4.
ModBaseSearch...
MobiDBSearch...

Protein family/group databases

CAZyGH9. Glycoside Hydrolase Family 9.

Proteomic databases

PRIDEQ7XUK4.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsOS04T0497200-01; OS04T0497200-01; OS04G0497200.
GeneID4336284.
KEGGosa:4336284.

Organism-specific databases

GrameneQ7XUK4.

Phylogenomic databases

eggNOGNOG307789.
HOGENOMHOG000021033.
OMAQCASAST.

Family and domain databases

Gene3D1.50.10.10. 1 hit.
InterProIPR008928. 6-hairpin_glycosidase-like.
IPR012341. 6hp_glycosidase.
IPR001701. Glyco_hydro_9.
IPR018221. Glyco_hydro_9_AS.
[Graphical view]
PfamPF00759. Glyco_hydro_9. 1 hit.
[Graphical view]
SUPFAMSSF48208. SSF48208. 1 hit.
PROSITEPS00592. GLYCOSYL_HYDROL_F9_1. 1 hit.
PS00698. GLYCOSYL_HYDROL_F9_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameGUN12_ORYSJ
AccessionPrimary (citable) accession number: Q7XUK4
Secondary accession number(s): Q0JC19
Entry history
Integrated into UniProtKB/Swiss-Prot: September 5, 2006
Last sequence update: March 1, 2004
Last modified: May 14, 2014
This is version 69 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Oryza sativa (rice)

Index of Oryza sativa entries and their corresponding gene designations

Glycosyl hydrolases

Classification of glycosyl hydrolase families and list of entries