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Q7XUK4

- GUN12_ORYSJ

UniProt

Q7XUK4 - GUN12_ORYSJ

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Protein
Endoglucanase 12
Gene
GLU3, Os04g0497200, LOC_Os04g41970, OSJNBa0067K08.14
Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 3 out of 5 - Experimental evidence at transcript leveli

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei513 – 5131 By similarity
Active sitei561 – 5611 By similarity
Active sitei570 – 5701 By similarity

GO - Molecular functioni

  1. cellulase activity Source: UniProtKB-EC
Complete GO annotation...

GO - Biological processi

  1. cellulose catabolic process Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Glycosidase, Hydrolase

Keywords - Biological processi

Carbohydrate metabolism, Cell wall biogenesis/degradation, Cellulose degradation, Polysaccharide degradation

Protein family/group databases

CAZyiGH9. Glycoside Hydrolase Family 9.

Names & Taxonomyi

Protein namesi
Recommended name:
Endoglucanase 12 (EC:3.2.1.4)
Alternative name(s):
Endo-1,4-beta glucanase 12
OsGLU3
Gene namesi
Name:GLU3
Ordered Locus Names:Os04g0497200, LOC_Os04g41970
ORF Names:OSJNBa0067K08.14
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 4

Organism-specific databases

GrameneiQ7XUK4.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini1 – 7373Cytoplasmic Reviewed prediction
Add
BLAST
Transmembranei74 – 9421Helical; Signal-anchor for type II membrane protein; Reviewed prediction
Add
BLAST
Topological domaini95 – 623529Extracellular Reviewed prediction
Add
BLAST

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 623623Endoglucanase 12
PRO_0000249289Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi217 – 2171N-linked (GlcNAc...) Reviewed prediction
Glycosylationi236 – 2361N-linked (GlcNAc...) Reviewed prediction
Glycosylationi324 – 3241N-linked (GlcNAc...) Reviewed prediction
Glycosylationi345 – 3451N-linked (GlcNAc...) Reviewed prediction
Glycosylationi408 – 4081N-linked (GlcNAc...) Reviewed prediction
Glycosylationi425 – 4251N-linked (GlcNAc...) Reviewed prediction

Keywords - PTMi

Glycoprotein

Proteomic databases

PRIDEiQ7XUK4.

Expressioni

Tissue specificityi

Ubiquitous.1 Publication

Structurei

3D structure databases

ProteinModelPortaliQ7XUK4.

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Signal-anchor, Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiNOG307789.
HOGENOMiHOG000021033.
OMAiQCASAST.

Family and domain databases

Gene3Di1.50.10.10. 1 hit.
InterProiIPR008928. 6-hairpin_glycosidase-like.
IPR012341. 6hp_glycosidase.
IPR001701. Glyco_hydro_9.
IPR018221. Glyco_hydro_9_AS.
[Graphical view]
PfamiPF00759. Glyco_hydro_9. 1 hit.
[Graphical view]
SUPFAMiSSF48208. SSF48208. 1 hit.
PROSITEiPS00592. GLYCOSYL_HYDROL_F9_1. 1 hit.
PS00698. GLYCOSYL_HYDROL_F9_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q7XUK4-1 [UniParc]FASTAAdd to Basket

« Hide

MYSANHWGGS FEIAADGAAE DDHSRNMDLD RGALSARQHQ LDETQQSWLL    50
GPPEAKKKDK YVDLGCVVVK RKLLWWVLWT LLAAFILIGL PVIIAKSIPK 100
KKPHAPPPDQ YTDALHKALL FFNAQKSGRL PKNNGIKWRG NSGLSDGSDL 150
TDVKGGLVGG YYDAGDNIKF HFPLAFSMTM LSWSVIEYSA KYKAVGEYDH 200
VRELIKWGTD YLLLTFNSSA STIDKVYSQV GIAKINGTQP DDHYCWNRPE 250
DMAYPRPVQT AGSAPDLGGE MAAALAAASI VFRDNAAYSK KLVNGAAAVY 300
KFARSSGRRT PYSRGNQYIE YYYNSTSYWD EYMWSAAWMY YATGNNTYIT 350
FATDPRLPKN AKAFYSILDF SVFSWDNKLP GAELLLSRLR MFLNPGYPYE 400
ESLIGYHNTT SMNMCTYFPR FGAFNFTKGG LAQFNHGKGQ PLQYTVANSF 450
LAALYADYME SVNVPGWYCG PYFMTVDDLR SFARSQVNYI LGDNPKKMSY 500
VVGYGKKYPR RLHHRGASTP HNGIKYSCTG GYKWRDTKGA DPNVLVGAMV 550
GGPDKNDQFK DARLTYAQNE PTLVGNAGLV AALVALTNSG RGAGVTAVDK 600
NTMFSAVPPM FPATPPPPSK WKP 623
Length:623
Mass (Da):69,243
Last modified:March 1, 2004 - v2
Checksum:iBAEF21481AEF18B2
GO

Sequence cautioni

The sequence BAF15118.2 differs from that shown. Reason: Erroneous gene model prediction.

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL606627 Genomic DNA. Translation: CAD41250.2.
AP008210 Genomic DNA. Translation: BAF15118.2. Sequence problems.
AK243593 mRNA. No translation available.
RefSeqiNP_001053204.2. NM_001059739.2.
UniGeneiOs.49714.
Os.58516.

Genome annotation databases

EnsemblPlantsiOS04T0497200-01; OS04T0497200-01; OS04G0497200.
GeneIDi4336284.
KEGGiosa:4336284.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL606627 Genomic DNA. Translation: CAD41250.2 .
AP008210 Genomic DNA. Translation: BAF15118.2 . Sequence problems.
AK243593 mRNA. No translation available.
RefSeqi NP_001053204.2. NM_001059739.2.
UniGenei Os.49714.
Os.58516.

3D structure databases

ProteinModelPortali Q7XUK4.
ModBasei Search...

Protein family/group databases

CAZyi GH9. Glycoside Hydrolase Family 9.

Proteomic databases

PRIDEi Q7XUK4.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi OS04T0497200-01 ; OS04T0497200-01 ; OS04G0497200 .
GeneIDi 4336284.
KEGGi osa:4336284.

Organism-specific databases

Gramenei Q7XUK4.

Phylogenomic databases

eggNOGi NOG307789.
HOGENOMi HOG000021033.
OMAi QCASAST.

Family and domain databases

Gene3Di 1.50.10.10. 1 hit.
InterProi IPR008928. 6-hairpin_glycosidase-like.
IPR012341. 6hp_glycosidase.
IPR001701. Glyco_hydro_9.
IPR018221. Glyco_hydro_9_AS.
[Graphical view ]
Pfami PF00759. Glyco_hydro_9. 1 hit.
[Graphical view ]
SUPFAMi SSF48208. SSF48208. 1 hit.
PROSITEi PS00592. GLYCOSYL_HYDROL_F9_1. 1 hit.
PS00698. GLYCOSYL_HYDROL_F9_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  3. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.
  4. "Oryza sativa full length cDNA."
    The rice full-length cDNA consortium
    Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Nipponbare.
  5. "OsGLU1, a putative membrane-bound endo-1,4-beta-D-glucanase from rice, affects plant internode elongation."
    Zhou H.-L., He S.-J., Cao Y.-R., Chen T., Du B.-X., Chu C.-C., Zhang J.-S., Chen S.-Y.
    Plant Mol. Biol. 60:137-151(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: TISSUE SPECIFICITY.

Entry informationi

Entry nameiGUN12_ORYSJ
AccessioniPrimary (citable) accession number: Q7XUK4
Secondary accession number(s): Q0JC19
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 5, 2006
Last sequence update: March 1, 2004
Last modified: May 14, 2014
This is version 69 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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