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Q7XU84

- P2C42_ORYSJ

UniProt

Q7XU84 - P2C42_ORYSJ

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Protein

Probable protein phosphatase 2C 42

Gene

Os04g0500900

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

[a protein]-serine/threonine phosphate + H2O = [a protein]-serine/threonine + phosphate.

Cofactori

Mg2+By similarity, Mn2+By similarityNote: Binds 2 magnesium or manganese ions per subunit.By similarity

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi62 – 621Manganese 1By similarity
Metal bindingi62 – 621Manganese 2By similarity
Metal bindingi63 – 631Manganese 1; via carbonyl oxygenBy similarity
Metal bindingi267 – 2671Manganese 2By similarity
Metal bindingi312 – 3121Manganese 2By similarity

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
  2. protein serine/threonine phosphatase activity Source: InterPro

GO - Biological processi

  1. protein dephosphorylation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Hydrolase, Protein phosphatase

Keywords - Ligandi

Magnesium, Manganese, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Probable protein phosphatase 2C 42 (EC:3.1.3.16)
Short name:
OsPP2C42
Gene namesi
Ordered Locus Names:Os04g0500900, LOC_Os04g42260
ORF Names:OSJNBa0029H02.20
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 4

Organism-specific databases

GrameneiQ7XU84.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 352352Probable protein phosphatase 2C 42PRO_0000363289Add
BLAST

Expressioni

Gene expression databases

ExpressionAtlasiQ7XU84. baseline.

Structurei

3D structure databases

ProteinModelPortaliQ7XU84.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini25 – 314290PP2C-likeAdd
BLAST

Sequence similaritiesi

Belongs to the PP2C family.Curated
Contains 1 PP2C-like domain.Curated

Phylogenomic databases

eggNOGiCOG0631.
InParanoidiQ7XU84.
KOiK17499.
OMAiVESAFFR.

Family and domain databases

Gene3Di3.60.40.10. 2 hits.
InterProiIPR001932. PP2C-like_dom.
IPR000222. PP2C_Mn2_Asp60_BS.
IPR015655. Protein_Pase_2C.
[Graphical view]
PANTHERiPTHR13832. PTHR13832. 1 hit.
PfamiPF00481. PP2C. 2 hits.
[Graphical view]
SMARTiSM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view]
SUPFAMiSSF81606. SSF81606. 2 hits.
PROSITEiPS01032. PP2C. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q7XU84-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAQPQRPLQV PDITKSTHSG GNTVLAYASS AMQGYRSTME DAHATIENLD
60 70 80 90 100
ALTNTSFFGV YDGHGGSAVA RYCANHLHNK VLEQEDFSSN LANALRQSFF
110 120 130 140 150
RMDEMLRNQA ASKELTEYGS GNEYWRTAGR SWLRCAPCVL GPVYCGPLAE
160 170 180 190 200
GCTACVVLIR NTQIVVGNAG DARCVISRNG QAIALSNDHK PNFPEETQRI
210 220 230 240 250
VAAGGSVSFS RGSHRVNNGI AVSRAIGDLS YKNNKKLRPE QQLLTCSPEI
260 270 280 290 300
RADQLTDDTE FLVIACDGVW DVLANQAVVD FVRLHLNNGV ELSVICESLL
310 320 330 340 350
QEAITRDPPS TDNMSVILVR FLHPEGNRGA RAATSSTSTG TVPSRHSKSI

SL
Length:352
Mass (Da):38,170
Last modified:February 10, 2009 - v4
Checksum:i1A64A936A9108123
GO

Sequence cautioni

The sequence BAH92731.1 differs from that shown. Reason: Erroneous gene model prediction. Curated
The sequence CAD41496.3 differs from that shown. Reason: Erroneous gene model prediction. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL606594 Genomic DNA. Translation: CAD41496.3. Sequence problems.
AP008210 Genomic DNA. Translation: BAH92731.1. Sequence problems.
CM000141 Genomic DNA. No translation available.
RefSeqiNP_001174003.1. NM_001187074.1.
UniGeneiOs.18716.
Os.60987.

Genome annotation databases

GeneIDi9269012.
KEGGiosa:9269012.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL606594 Genomic DNA. Translation: CAD41496.3 . Sequence problems.
AP008210 Genomic DNA. Translation: BAH92731.1 . Sequence problems.
CM000141 Genomic DNA. No translation available.
RefSeqi NP_001174003.1. NM_001187074.1.
UniGenei Os.18716.
Os.60987.

3D structure databases

ProteinModelPortali Q7XU84.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 9269012.
KEGGi osa:9269012.

Organism-specific databases

Gramenei Q7XU84.

Phylogenomic databases

eggNOGi COG0631.
InParanoidi Q7XU84.
KOi K17499.
OMAi VESAFFR.

Gene expression databases

ExpressionAtlasi Q7XU84. baseline.

Family and domain databases

Gene3Di 3.60.40.10. 2 hits.
InterProi IPR001932. PP2C-like_dom.
IPR000222. PP2C_Mn2_Asp60_BS.
IPR015655. Protein_Pase_2C.
[Graphical view ]
PANTHERi PTHR13832. PTHR13832. 1 hit.
Pfami PF00481. PP2C. 2 hits.
[Graphical view ]
SMARTi SM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view ]
SUPFAMi SSF81606. SSF81606. 2 hits.
PROSITEi PS01032. PP2C. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  3. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.
  4. "The genomes of Oryza sativa: a history of duplications."
    Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.
    , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.
    PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  5. "Genome-wide and expression analysis of protein phosphatase 2C in rice and Arabidopsis."
    Xue T., Wang D., Zhang S., Ehlting J., Ni F., Jacab S., Zheng C., Zhong Y.
    BMC Genomics 9:550-550(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENE FAMILY, NOMENCLATURE.

Entry informationi

Entry nameiP2C42_ORYSJ
AccessioniPrimary (citable) accession number: Q7XU84
Secondary accession number(s): A3AVA7, C7J1T0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 10, 2009
Last sequence update: February 10, 2009
Last modified: November 26, 2014
This is version 77 of the entry and version 4 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3