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Q7XTC7

- P2C40_ORYSJ

UniProt

Q7XTC7 - P2C40_ORYSJ

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Protein

Probable protein phosphatase 2C 40

Gene

Os04g0449400

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

[a protein]-serine/threonine phosphate + H2O = [a protein]-serine/threonine + phosphate.

Cofactori

Mg2+By similarity, Mn2+By similarityNote: Binds 2 magnesium or manganese ions per subunit.By similarity

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi98 – 981Manganese 1By similarity
Metal bindingi98 – 981Manganese 2By similarity
Metal bindingi99 – 991Manganese 1; via carbonyl oxygenBy similarity
Metal bindingi273 – 2731Manganese 2By similarity
Metal bindingi312 – 3121Manganese 2By similarity

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
  2. phosphoprotein phosphatase activity Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Hydrolase, Protein phosphatase

Keywords - Ligandi

Magnesium, Manganese, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Probable protein phosphatase 2C 40 (EC:3.1.3.16)
Short name:
OsPP2C40
Gene namesi
Ordered Locus Names:Os04g0449400, LOC_Os04g37660
ORF Names:OSJNBa0064H22.20
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 4

Organism-specific databases

GrameneiQ7XTC7.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 461461Probable protein phosphatase 2C 40PRO_0000363287Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliQ7XTC7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini56 – 314259PP2C-likeAdd
BLAST

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi2 – 87Poly-Ala

Sequence similaritiesi

Belongs to the PP2C family.Curated
Contains 1 PP2C-like domain.Curated

Phylogenomic databases

eggNOGiCOG0631.
HOGENOMiHOG000240114.
InParanoidiQ7XTC7.
OMAiDFQTRAH.

Family and domain databases

Gene3Di3.60.40.10. 1 hit.
InterProiIPR001932. PP2C-like_dom.
IPR015655. Protein_Pase_2C.
[Graphical view]
PANTHERiPTHR13832. PTHR13832. 1 hit.
PfamiPF00481. PP2C. 1 hit.
[Graphical view]
SMARTiSM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view]
SUPFAMiSSF81606. SSF81606. 1 hit.

Sequences (2)i

Sequence statusi: Complete.

This entry describes 2 isoformsi produced by alternative splicing. Align

Isoform 1 (identifier: Q7XTC7-1) [UniParc]FASTAAdd to Basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

        10         20         30         40         50
MAAAAAAATV EAVGVAGGRR RRSGSVALGD LLRREASAER ASASASAGAG
60 70 80 90 100
GRERERRPSV AAGQACRAKK GEDFALLKPA CERLPAGGAP FSAFALFDGH
110 120 130 140 150
NGSGAAVYAK ENILSNVMCC VPADLSGDEW LAALPRALVA GFVKTDKDFQ
160 170 180 190 200
TRAHSSGTTV TFVIIDGYVV TVASVGDSRC VLEAEGTIYH LSADHRFDAS
210 220 230 240 250
EEEVGRVTEC GGEVGRLNVV GGAEIGPLRC WPGGLCLSRS IGDQDVGEFI
260 270 280 290 300
IPVPYVKQIK LSSAGGRIII SSDGVWDALT VDTAFSCARG LPPEAAADQI
310 320 330 340 350
VKEAIASKGL RDDTTCIVID IIPPEKISPT VQPAKKAGKG LFKNIFYKKA
360 370 380 390 400
TSDSPCHADK DQCTQPDLVE EVFEDGCPSL SRRLDSEYPV RNMFKLFICA
410 420 430 440 450
ICQVELESGQ GISIHEGLSK SGKLRPWDGP FLCHSCQEKK EAMEGKRHSR
460
DSSSRNSGSS E
Length:461
Mass (Da):48,707
Last modified:February 10, 2009 - v3
Checksum:iFB7D3035F093C1BA
GO
Isoform 2 (identifier: Q7XTC7-2) [UniParc]FASTAAdd to Basket

The sequence of this isoform differs from the canonical sequence as follows:
     384-392: LDSEYPVRN → FVLCTLYPS
     393-461: Missing.

Note: Derived from EST data. No experimental confirmation available.

Show »
Length:392
Mass (Da):41,019
Checksum:iED423DB5E4E2C3A4
GO

Sequence cautioni

The sequence BAF14845.2 differs from that shown. Reason: Erroneous gene model prediction. Curated
The sequence CAE01570.2 differs from that shown. Reason: Erroneous gene model prediction. Curated

Alternative sequence

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Alternative sequencei384 – 3929LDSEYPVRN → FVLCTLYPS in isoform 2. CuratedVSP_036267
Alternative sequencei393 – 46169Missing in isoform 2. CuratedVSP_036268Add
BLAST

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL606448 Genomic DNA. Translation: CAE01570.2. Sequence problems.
AP008210 Genomic DNA. Translation: BAF14845.2. Sequence problems.
RefSeqiNP_001052931.2. NM_001059466.2.
UniGeneiOs.7326.

Genome annotation databases

GeneIDi4335989.
KEGGiosa:4335989.

Keywords - Coding sequence diversityi

Alternative splicing

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL606448 Genomic DNA. Translation: CAE01570.2 . Sequence problems.
AP008210 Genomic DNA. Translation: BAF14845.2 . Sequence problems.
RefSeqi NP_001052931.2. NM_001059466.2.
UniGenei Os.7326.

3D structure databases

ProteinModelPortali Q7XTC7.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 4335989.
KEGGi osa:4335989.

Organism-specific databases

Gramenei Q7XTC7.

Phylogenomic databases

eggNOGi COG0631.
HOGENOMi HOG000240114.
InParanoidi Q7XTC7.
OMAi DFQTRAH.

Family and domain databases

Gene3Di 3.60.40.10. 1 hit.
InterProi IPR001932. PP2C-like_dom.
IPR015655. Protein_Pase_2C.
[Graphical view ]
PANTHERi PTHR13832. PTHR13832. 1 hit.
Pfami PF00481. PP2C. 1 hit.
[Graphical view ]
SMARTi SM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view ]
SUPFAMi SSF81606. SSF81606. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  3. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.
  4. "Genome-wide and expression analysis of protein phosphatase 2C in rice and Arabidopsis."
    Xue T., Wang D., Zhang S., Ehlting J., Ni F., Jacab S., Zheng C., Zhong Y.
    BMC Genomics 9:550-550(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENE FAMILY, NOMENCLATURE.

Entry informationi

Entry nameiP2C40_ORYSJ
AccessioniPrimary (citable) accession number: Q7XTC7
Secondary accession number(s): Q0JCU2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 10, 2009
Last sequence update: February 10, 2009
Last modified: November 26, 2014
This is version 64 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3