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Q7XSK2

- BGL16_ORYSJ

UniProt

Q7XSK2 - BGL16_ORYSJ

Protein

Beta-glucosidase 16

Gene

BGLU16

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi
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    • History
      Entry version 63 (01 Oct 2014)
      Sequence version 2 (01 Mar 2004)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Hydrolysis of terminal, non-reducing beta-D-glucosyl residues with release of beta-D-glucose.

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei47 – 471SubstrateBy similarity
    Binding sitei150 – 1501SubstrateBy similarity
    Binding sitei195 – 1951SubstrateBy similarity
    Active sitei196 – 1961Proton donorBy similarity
    Binding sitei339 – 3391SubstrateBy similarity
    Active sitei410 – 4101NucleophileBy similarity
    Binding sitei457 – 4571SubstrateBy similarity

    GO - Molecular functioni

    1. beta-glucosidase activity Source: UniProtKB-EC

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Keywords - Molecular functioni

    Glycosidase, Hydrolase

    Protein family/group databases

    CAZyiGH1. Glycoside Hydrolase Family 1.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Beta-glucosidase 16 (EC:3.2.1.21)
    Short name:
    Os4bglu16
    Gene namesi
    Name:BGLU16
    Ordered Locus Names:Os04g0513400, LOC_Os04g43390
    ORF Names:OSJNBa0004N05.24, OSJNBb0070J16.1
    OrganismiOryza sativa subsp. japonica (Rice)
    Taxonomic identifieri39947 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
    ProteomesiUP000000763: Chromosome 4

    Organism-specific databases

    GrameneiQ7XSK2.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2727Sequence AnalysisAdd
    BLAST
    Chaini28 – 516489Beta-glucosidase 16PRO_0000390333Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Glycosylationi198 – 1981N-linked (GlcNAc...)Sequence Analysis
    Disulfide bondi215 ↔ 222By similarity
    Glycosylationi221 – 2211N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi275 – 2751N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi403 – 4031N-linked (GlcNAc...)Sequence Analysis

    Keywords - PTMi

    Disulfide bond, Glycoprotein

    Structurei

    3D structure databases

    ProteinModelPortaliQ7XSK2.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Region

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Regioni464 – 4652Substrate bindingBy similarity

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 1 family.Curated

    Keywords - Domaini

    Signal

    Phylogenomic databases

    eggNOGiCOG2723.
    HOGENOMiHOG000088630.
    OMAiDYPREMR.

    Family and domain databases

    Gene3Di3.20.20.80. 1 hit.
    InterProiIPR001360. Glyco_hydro_1.
    IPR018120. Glyco_hydro_1_AS.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10353. PTHR10353. 1 hit.
    PfamiPF00232. Glyco_hydro_1. 1 hit.
    [Graphical view]
    PRINTSiPR00131. GLHYDRLASE1.
    SUPFAMiSSF51445. SSF51445. 1 hit.
    PROSITEiPS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    Q7XSK2-1 [UniParc]FASTAAdd to Basket

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    MAVAAATRIA VVVVVLALAV LAPAARGLRR DDFPPGFLFG AATSAYQIEG    50
    AYLDDNKGLN NWDVFTHTQA GRISDGRNGD VADDHYHRYT EDVDILHNLG 100
    VNSYRFSISW ARILPRGRLG GVNSAGIAFY NRLINALLQK GIQPFVTLNH 150
    FDIPHELETR YGGWLGAAIR EEFEYYSDVC FNAFGDRVRF WTTFNEPNLS 200
    TRHQYILGEF PPNHCSPPFG NCSSGDSRRE PYAAAHNILL SHAAAVHNYK 250
    TNYQAKQGGS IGIVIAVKWY EPLTNSTEDV RAARRALAFE VDWFLDPIFF 300
    GDYPREMREI LSSNLPKFTP EEKKLLQNNK VDFIGINHYT AIYAKDCIYS 350
    PCTLDTYEGN ALVYAIGRRN GKIIGKPTAL HGYFVVPEAM EKVVMYVNDR 400
    YRNTTIYITE NGYSQHSDTS MEDLINDVER VNYMHDYLKY LSSAIRKGAN 450
    VGGYFAWSIV DNFEWVYGYT VKFGLYQVDF DTQERIPRMS AKWYRDFLTS 500
    SSLTDGLQVR SRRADS 516
    Length:516
    Mass (Da):58,556
    Last modified:March 1, 2004 - v2
    Checksum:i8F828ECAEDF55FC0
    GO

    Sequence cautioni

    The sequence BAF15217.1 differs from that shown. Reason: Erroneous gene model prediction.

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL606659 Genomic DNA. Translation: CAE01908.2.
    AL606622 Genomic DNA. Translation: CAE54544.1.
    AP008210 Genomic DNA. Translation: BAF15217.1. Sequence problems.
    RefSeqiNP_001053303.1. NM_001059838.1.
    UniGeneiOs.35154.

    Genome annotation databases

    GeneIDi4336389.
    KEGGiosa:4336389.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL606659 Genomic DNA. Translation: CAE01908.2 .
    AL606622 Genomic DNA. Translation: CAE54544.1 .
    AP008210 Genomic DNA. Translation: BAF15217.1 . Sequence problems.
    RefSeqi NP_001053303.1. NM_001059838.1.
    UniGenei Os.35154.

    3D structure databases

    ProteinModelPortali Q7XSK2.
    ModBasei Search...
    MobiDBi Search...

    Protein family/group databases

    CAZyi GH1. Glycoside Hydrolase Family 1.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 4336389.
    KEGGi osa:4336389.

    Organism-specific databases

    Gramenei Q7XSK2.

    Phylogenomic databases

    eggNOGi COG2723.
    HOGENOMi HOG000088630.
    OMAi DYPREMR.

    Family and domain databases

    Gene3Di 3.20.20.80. 1 hit.
    InterProi IPR001360. Glyco_hydro_1.
    IPR018120. Glyco_hydro_1_AS.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10353. PTHR10353. 1 hit.
    Pfami PF00232. Glyco_hydro_1. 1 hit.
    [Graphical view ]
    PRINTSi PR00131. GLHYDRLASE1.
    SUPFAMi SSF51445. SSF51445. 1 hit.
    PROSITEi PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    3. "The rice annotation project database (RAP-DB): 2008 update."
      The rice annotation project (RAP)
      Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENOME REANNOTATION.
      Strain: cv. Nipponbare.
    4. "Analysis of rice glycosyl hydrolase family 1 and expression of Os4bglu12 beta-glucosidase."
      Opassiri R., Pomthong B., Onkoksoong T., Akiyama T., Esen A., Ketudat Cairns J.R.
      BMC Plant Biol. 6:33-33(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENE FAMILY, NOMENCLATURE.

    Entry informationi

    Entry nameiBGL16_ORYSJ
    AccessioniPrimary (citable) accession number: Q7XSK2
    Secondary accession number(s): Q0JBS0
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: December 15, 2009
    Last sequence update: March 1, 2004
    Last modified: October 1, 2014
    This is version 63 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Glycosyl hydrolases
      Classification of glycosyl hydrolase families and list of entries
    2. Oryza sativa (rice)
      Index of Oryza sativa entries and their corresponding gene designations
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3