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Q7XR80

- ARP8_ORYSJ

UniProt

Q7XR80 - ARP8_ORYSJ

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Protein

Actin-related protein 8

Gene

ARP8

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli

Functioni

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi262 – 2654ATPBy similarity

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. structural constituent of cytoskeleton Source: EnsemblPlants/Gramene

GO - Biological processi

  1. actin filament-based process Source: EnsemblPlants/Gramene
Complete GO annotation...

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Actin-related protein 8
Alternative name(s):
F-box protein ARP8
Gene namesi
Name:ARP8
Ordered Locus Names:Os04g0667700, LOC_Os04g57210
ORF Names:B0811B10.7, H1005F08.28, OsJ_015820, OSJNBa0043A12.5
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 4

Organism-specific databases

GrameneiQ7XR80.

Subcellular locationi

Nucleusnucleolus By similarity. Cytoplasm By similarity
Note: Localized to the nucleolus in interphase cells and dispersed in the cytoplasm in mitotic cells.By similarity

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-KW
  2. nucleolus Source: EnsemblPlants/Gramene
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm, Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 484484Actin-related protein 8PRO_0000320545Add
BLAST

Proteomic databases

PRIDEiQ7XR80.

Structurei

3D structure databases

ProteinModelPortaliQ7XR80.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini44 – 9047F-boxPROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Belongs to the actin family. Plant ARP8 subfamily.Curated
Contains 1 F-box domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiCOG5277.
InParanoidiQ7XR80.
KOiK16616.

Family and domain databases

InterProiIPR004000. Actin-related.
IPR001810. F-box_dom.
[Graphical view]
PANTHERiPTHR11937. PTHR11937. 1 hit.
PfamiPF00022. Actin. 1 hit.
PF12937. F-box-like. 1 hit.
[Graphical view]
SMARTiSM00268. ACTIN. 1 hit.
SM00256. FBOX. 1 hit.
[Graphical view]
SUPFAMiSSF81383. SSF81383. 1 hit.
PROSITEiPS50181. FBOX. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q7XR80-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAVLLRKVWG SVLARAAAGA APPEAFAAAA SPRRPQAAGE YGSLGALDVL
60 70 80 90 100
PIDVLAQILR LLGPADAARS TAVCRAWRLL ASDNGLWAFF LRLGPDPWEL
110 120 130 140 150
VVFAETHLGA GPALHPGLYY DSSPQLSFKH VYTRRAVVPG SIIVDGGSGY
160 170 180 190 200
CKYGWSKYAA PSGRCATFLE FGNIESPMYA RLRHFLSTIY TRMQVKPSTQ
210 220 230 240 250
PIIVVLPLCH SDDTESARAS RKQYRDTLYS VLFDMNVPAV CSVDQAVLAL
260 270 280 290 300
YAAKRTSGIV VNIGFNATSI VPIFQGRVMH EIGVETVGQG ALKLTGFLKE
310 320 330 340 350
LMQQRNITFE SLYTVRTIKE KLCYVAADYE AEKRKDTQAS CEVDGEGWFT
360 370 380 390 400
LSEERFKTAE ILFQPQIGGV RAMGLHKAVS LCMDHCYNSE VFGDDNWYKT
410 420 430 440 450
VVLSGGSSCL PGLSERLEKE LRELLPAHIS EGIRVIPPPF GTDSAWFGAK
460 470 480
MISNVSTFTE AWCIKKKQFR QKTRRNGPSF VNVW
Length:484
Mass (Da):53,293
Last modified:October 1, 2003 - v1
Checksum:iB2D5677782F3F1E1
GO

Sequence cautioni

The sequence AK100366 differs from that shown. Reason: Frameshift at positions 193 and 212.
The sequence CM000141 differs from that shown. Reason: Frameshift at position 30.
The sequence BAF16104.1 differs from that shown. Reason: Erroneous gene model prediction.
The sequence CAJ86197.1 differs from that shown. Reason: Erroneous gene model prediction.

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
EU214983 Genomic DNA. Translation: ABW90794.1.
EU214984 Genomic DNA. Translation: ABW90795.1.
EU214985 Genomic DNA. Translation: ABW90796.1.
EU214986 Genomic DNA. Translation: ABW90797.1.
EU214987 Genomic DNA. Translation: ABW90798.1.
EU214988 Genomic DNA. Translation: ABW90799.1.
EU215015 Genomic DNA. Translation: ABW90826.1.
EU215016 Genomic DNA. Translation: ABW90827.1.
EU215017 Genomic DNA. Translation: ABW90828.1.
EU215018 Genomic DNA. Translation: ABW90829.1.
EU215019 Genomic DNA. Translation: ABW90830.1.
EU215020 Genomic DNA. Translation: ABW90831.1.
EU215021 Genomic DNA. Translation: ABW90832.1.
EU215022 Genomic DNA. Translation: ABW90833.1.
EU215023 Genomic DNA. Translation: ABW90834.1.
EU215024 Genomic DNA. Translation: ABW90835.1.
EU215025 Genomic DNA. Translation: ABW90836.1.
EU215026 Genomic DNA. Translation: ABW90837.1.
EU215027 Genomic DNA. Translation: ABW90838.1.
EU215028 Genomic DNA. Translation: ABW90839.1.
EU215029 Genomic DNA. Translation: ABW90840.1.
EU215030 Genomic DNA. Translation: ABW90841.1.
EU215031 Genomic DNA. Translation: ABW90842.1.
EU215032 Genomic DNA. Translation: ABW90843.1.
EU215033 Genomic DNA. Translation: ABW90844.1.
EU215034 Genomic DNA. Translation: ABW90845.1.
EU215035 Genomic DNA. Translation: ABW90846.1.
EU215036 Genomic DNA. Translation: ABW90847.1.
EU215037 Genomic DNA. Translation: ABW90848.1.
EU215038 Genomic DNA. Translation: ABW90849.1.
EU215039 Genomic DNA. Translation: ABW90850.1.
EU215041 Genomic DNA. Translation: ABW90852.1.
EU215042 Genomic DNA. Translation: ABW90853.1.
EU215043 Genomic DNA. Translation: ABW90854.1.
EU215044 Genomic DNA. Translation: ABW90855.1.
EU215045 Genomic DNA. Translation: ABW90856.1.
EU215046 Genomic DNA. Translation: ABW90857.1.
EU215047 Genomic DNA. Translation: ABW90858.1.
EU215048 Genomic DNA. Translation: ABW90859.1.
EU215049 Genomic DNA. Translation: ABW90860.1.
EU215050 Genomic DNA. Translation: ABW90861.1.
EU215051 Genomic DNA. Translation: ABW90862.1.
EU215052 Genomic DNA. Translation: ABW90863.1.
EU215053 Genomic DNA. Translation: ABW90864.1.
EU215054 Genomic DNA. Translation: ABW90865.1.
AL606619 Genomic DNA. Translation: CAE02800.1.
AL732340 Genomic DNA. Translation: CAJ86197.1. Sequence problems.
AP008210 Genomic DNA. Translation: BAF16104.1. Sequence problems.
CM000141 Genomic DNA. No translation available.
AK100366 mRNA. No translation available.
RefSeqiNP_001054190.1. NM_001060725.1.
UniGeneiOs.9650.

Genome annotation databases

GeneIDi4337330.
KEGGiosa:4337330.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
EU214983 Genomic DNA. Translation: ABW90794.1 .
EU214984 Genomic DNA. Translation: ABW90795.1 .
EU214985 Genomic DNA. Translation: ABW90796.1 .
EU214986 Genomic DNA. Translation: ABW90797.1 .
EU214987 Genomic DNA. Translation: ABW90798.1 .
EU214988 Genomic DNA. Translation: ABW90799.1 .
EU215015 Genomic DNA. Translation: ABW90826.1 .
EU215016 Genomic DNA. Translation: ABW90827.1 .
EU215017 Genomic DNA. Translation: ABW90828.1 .
EU215018 Genomic DNA. Translation: ABW90829.1 .
EU215019 Genomic DNA. Translation: ABW90830.1 .
EU215020 Genomic DNA. Translation: ABW90831.1 .
EU215021 Genomic DNA. Translation: ABW90832.1 .
EU215022 Genomic DNA. Translation: ABW90833.1 .
EU215023 Genomic DNA. Translation: ABW90834.1 .
EU215024 Genomic DNA. Translation: ABW90835.1 .
EU215025 Genomic DNA. Translation: ABW90836.1 .
EU215026 Genomic DNA. Translation: ABW90837.1 .
EU215027 Genomic DNA. Translation: ABW90838.1 .
EU215028 Genomic DNA. Translation: ABW90839.1 .
EU215029 Genomic DNA. Translation: ABW90840.1 .
EU215030 Genomic DNA. Translation: ABW90841.1 .
EU215031 Genomic DNA. Translation: ABW90842.1 .
EU215032 Genomic DNA. Translation: ABW90843.1 .
EU215033 Genomic DNA. Translation: ABW90844.1 .
EU215034 Genomic DNA. Translation: ABW90845.1 .
EU215035 Genomic DNA. Translation: ABW90846.1 .
EU215036 Genomic DNA. Translation: ABW90847.1 .
EU215037 Genomic DNA. Translation: ABW90848.1 .
EU215038 Genomic DNA. Translation: ABW90849.1 .
EU215039 Genomic DNA. Translation: ABW90850.1 .
EU215041 Genomic DNA. Translation: ABW90852.1 .
EU215042 Genomic DNA. Translation: ABW90853.1 .
EU215043 Genomic DNA. Translation: ABW90854.1 .
EU215044 Genomic DNA. Translation: ABW90855.1 .
EU215045 Genomic DNA. Translation: ABW90856.1 .
EU215046 Genomic DNA. Translation: ABW90857.1 .
EU215047 Genomic DNA. Translation: ABW90858.1 .
EU215048 Genomic DNA. Translation: ABW90859.1 .
EU215049 Genomic DNA. Translation: ABW90860.1 .
EU215050 Genomic DNA. Translation: ABW90861.1 .
EU215051 Genomic DNA. Translation: ABW90862.1 .
EU215052 Genomic DNA. Translation: ABW90863.1 .
EU215053 Genomic DNA. Translation: ABW90864.1 .
EU215054 Genomic DNA. Translation: ABW90865.1 .
AL606619 Genomic DNA. Translation: CAE02800.1 .
AL732340 Genomic DNA. Translation: CAJ86197.1 . Sequence problems.
AP008210 Genomic DNA. Translation: BAF16104.1 . Sequence problems.
CM000141 Genomic DNA. No translation available.
AK100366 mRNA. No translation available.
RefSeqi NP_001054190.1. NM_001060725.1.
UniGenei Os.9650.

3D structure databases

ProteinModelPortali Q7XR80.
ModBasei Search...
MobiDBi Search...

Proteomic databases

PRIDEi Q7XR80.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 4337330.
KEGGi osa:4337330.

Organism-specific databases

Gramenei Q7XR80.

Phylogenomic databases

eggNOGi COG5277.
InParanoidi Q7XR80.
KOi K16616.

Family and domain databases

InterProi IPR004000. Actin-related.
IPR001810. F-box_dom.
[Graphical view ]
PANTHERi PTHR11937. PTHR11937. 1 hit.
Pfami PF00022. Actin. 1 hit.
PF12937. F-box-like. 1 hit.
[Graphical view ]
SMARTi SM00268. ACTIN. 1 hit.
SM00256. FBOX. 1 hit.
[Graphical view ]
SUPFAMi SSF81383. SSF81383. 1 hit.
PROSITEi PS50181. FBOX. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The extent of linkage disequilibrium in rice (Oryza sativa L.)."
    Mather K.A., Caicedo A.L., Polato N.R., Olsen K.M., McCouch S., Purugganan M.D.
    Genetics 177:2223-2232(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  4. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.
  5. "The genomes of Oryza sativa: a history of duplications."
    Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.
    , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.
    PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  6. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
    The rice full-length cDNA consortium
    Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Nipponbare.
  7. Cited for: REVIEW, GENE FAMILY, NOMENCLATURE.

Entry informationi

Entry nameiARP8_ORYSJ
AccessioniPrimary (citable) accession number: Q7XR80
Secondary accession number(s): A3AYE8
, A8WAZ7, Q01ML6, Q0J983, Q259W4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 26, 2008
Last sequence update: October 1, 2003
Last modified: October 29, 2014
This is version 69 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3