Reviewed, UniProtKB/Swiss-Prot Q7XR80 (ARP8_ORYSJ)

Names and origin

Protein names

Recommended name:
    Actin-related protein 8
Alternative name(s):
    F-box protein ARP8

Gene names

Name:	ARP8
Ordered Locus Names:	Os04g0667700, LOC_Os04g57210
ORF Names:	B0811B10.7, H1005F08.28, OsJ_015820, OSJNBa0043A12.5

Organism

Oryza sativa subsp. japonica (Rice)

Taxonomic identifier

39947 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Poales › Poaceae › BEP clade › Ehrhartoideae › Oryzeae › Oryza

Protein attributes

Sequence length	484 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at transcript level.

General annotation (Comments)

Sequence similarities	Belongs to the actin family. Plant ARP8 subfamily. Contains 1 F-box domain.
Sequence caution	The sequence AK100366 differs from that shown. Reason: Frameshift at positions 193 and 212. The sequence BAF16104.1 differs from that shown. Reason: Erroneous gene model prediction. The sequence CAJ86197.1 differs from that shown. Reason: Erroneous gene model prediction. The sequence CM000141 differs from that shown. Reason: Frameshift at position 30.

Ontologies

Gene Ontology (GO)
Molecular function	protein binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 484	484	Actin-related protein 8		PRO_0000320545
Regions
	Domain	44 – 90	47	F-box

Sequences

	Sequence		Length	Mass (Da)
	Q7XR80-1 [UniParc]. Last modified October 1, 2003. Version 1. Checksum: B2D5677782F3F1E1	FASTA	484	53,293
	10 20 30 40 50 60 MAVLLRKVWG SVLARAAAGA APPEAFAAAA SPRRPQAAGE YGSLGALDVL PIDVLAQILR 70 80 90 100 110 120 LLGPADAARS TAVCRAWRLL ASDNGLWAFF LRLGPDPWEL VVFAETHLGA GPALHPGLYY 130 140 150 160 170 180 DSSPQLSFKH VYTRRAVVPG SIIVDGGSGY CKYGWSKYAA PSGRCATFLE FGNIESPMYA 190 200 210 220 230 240 RLRHFLSTIY TRMQVKPSTQ PIIVVLPLCH SDDTESARAS RKQYRDTLYS VLFDMNVPAV 250 260 270 280 290 300 CSVDQAVLAL YAAKRTSGIV VNIGFNATSI VPIFQGRVMH EIGVETVGQG ALKLTGFLKE 310 320 330 340 350 360 LMQQRNITFE SLYTVRTIKE KLCYVAADYE AEKRKDTQAS CEVDGEGWFT LSEERFKTAE 370 380 390 400 410 420 ILFQPQIGGV RAMGLHKAVS LCMDHCYNSE VFGDDNWYKT VVLSGGSSCL PGLSERLEKE 430 440 450 460 470 480 LRELLPAHIS EGIRVIPPPF GTDSAWFGAK MISNVSTFTE AWCIKKKQFR QKTRRNGPSF VNVW

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The extent of linkage disequilibrium in rice (Oryza sativa L.)." Mather K.A., Caicedo A.L., Polato N.R., Olsen K.M., McCouch S., Purugganan M.D. Genetics 177:2223-2232(2007) [PubMed: 17947413] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
[2]	"Sequence and analysis of rice chromosome 4." Feng Q., Zhang Y., Hao P., Wang S., Fu G., Huang Y., Li Y., Zhu J., Liu Y., Hu X., Jia P., Zhang Y., Zhao Q., Ying K., Yu S., Tang Y., Weng Q., Zhang L. , Lu Y., Mu J., Lu Y., Zhang L.S., Yu Z., Fan D., Liu X., Lu T., Li C., Wu Y., Sun T., Lei H., Li T., Hu H., Guan J., Wu M., Zhang R., Zhou B., Chen Z., Chen L., Jin Z., Wang R., Yin H., Cai Z., Ren S., Lv G., Gu W., Zhu G., Tu Y., Jia J., Zhang Y., Chen J., Kang H., Chen X., Shao C., Sun Y., Hu Q., Zhang X., Zhang W., Wang L., Ding C., Sheng H., Gu J., Chen S., Ni L., Zhu F., Chen W., Lan L., Lai Y., Cheng Z., Gu M., Jiang J., Li J., Hong G., Xue Y., Han B. Nature 420:316-320(2002) [PubMed: 12447439] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nipponbare.
[3]	"The map-based sequence of the rice genome." International rice genome sequencing project (IRGSP) Nature 436:793-800(2005) [PubMed: 16100779] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nipponbare.
[4]	"Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana." The rice annotation project (RAP) Genome Res. 17:175-183(2007) [PubMed: 17210932] [Abstract] Cited for: GENOME REANNOTATION. Strain: cv. Nipponbare.
[5]	"The genomes of Oryza sativa: a history of duplications." Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L. , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H. PLoS Biol. 3:266-281(2005) [PubMed: 15685292] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nipponbare.
[6]	"Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice." The rice full-length cDNA consortium Science 301:376-379(2003) [PubMed: 12869764] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Strain: cv. Nipponbare.
[7]	"Plant actin-related proteins." Kandasamy M.K., Deal R.B., McKinney E.C., Meagher R.B. Trends Plant Sci. 9:196-202(2004) [PubMed: 15063870] [Abstract] Cited for: REVIEW, GENE FAMILY, NOMENCLATURE.

Cross-references

Sequence databases
EMBLGenBankDDBJ	EU214983 Genomic DNA. Translation: ABW90794.1. EU214984 Genomic DNA. Translation: ABW90795.1. EU214985 Genomic DNA. Translation: ABW90796.1. EU214986 Genomic DNA. Translation: ABW90797.1. EU214987 Genomic DNA. Translation: ABW90798.1. EU214988 Genomic DNA. Translation: ABW90799.1. EU215015 Genomic DNA. Translation: ABW90826.1. EU215016 Genomic DNA. Translation: ABW90827.1. EU215017 Genomic DNA. Translation: ABW90828.1. EU215018 Genomic DNA. Translation: ABW90829.1. EU215019 Genomic DNA. Translation: ABW90830.1. EU215020 Genomic DNA. Translation: ABW90831.1. EU215021 Genomic DNA. Translation: ABW90832.1. EU215022 Genomic DNA. Translation: ABW90833.1. EU215023 Genomic DNA. Translation: ABW90834.1. EU215024 Genomic DNA. Translation: ABW90835.1. EU215025 Genomic DNA. Translation: ABW90836.1. EU215026 Genomic DNA. Translation: ABW90837.1. EU215027 Genomic DNA. Translation: ABW90838.1. EU215028 Genomic DNA. Translation: ABW90839.1. EU215029 Genomic DNA. Translation: ABW90840.1. EU215030 Genomic DNA. Translation: ABW90841.1. EU215031 Genomic DNA. Translation: ABW90842.1. EU215032 Genomic DNA. Translation: ABW90843.1. EU215033 Genomic DNA. Translation: ABW90844.1. EU215034 Genomic DNA. Translation: ABW90845.1. EU215035 Genomic DNA. Translation: ABW90846.1. EU215036 Genomic DNA. Translation: ABW90847.1. EU215037 Genomic DNA. Translation: ABW90848.1. EU215038 Genomic DNA. Translation: ABW90849.1. EU215039 Genomic DNA. Translation: ABW90850.1. EU215041 Genomic DNA. Translation: ABW90852.1. EU215042 Genomic DNA. Translation: ABW90853.1. EU215043 Genomic DNA. Translation: ABW90854.1. EU215044 Genomic DNA. Translation: ABW90855.1. EU215045 Genomic DNA. Translation: ABW90856.1. EU215046 Genomic DNA. Translation: ABW90857.1. EU215047 Genomic DNA. Translation: ABW90858.1. EU215048 Genomic DNA. Translation: ABW90859.1. EU215049 Genomic DNA. Translation: ABW90860.1. EU215050 Genomic DNA. Translation: ABW90861.1. EU215051 Genomic DNA. Translation: ABW90862.1. EU215052 Genomic DNA. Translation: ABW90863.1. EU215053 Genomic DNA. Translation: ABW90864.1. EU215054 Genomic DNA. Translation: ABW90865.1. AL606619 Genomic DNA. Translation: CAE02800.1. AL732340 Genomic DNA. Translation: CAJ86197.1. Sequence problems. CR855038 Genomic DNA. Translation: CAH65999.1. AP008210 Genomic DNA. Translation: BAF16104.1. Sequence problems. CM000141 Genomic DNA. No translation available. AK100366 mRNA. No translation available.
RefSeq	NP_001054190.1.
UniGene	Os.9650
3D structure databases
ModBase	Search...
Genome annotation databases
GeneID	4337330.
KEGG	osa:4337330.
Organism-specific databases
Gramene	Q7XR80.
Family and domain databases
InterPro	IPR004000. Actin-like. IPR004001. Actin_CS. IPR001810. F-box. [Graphical view]
PANTHER	PTHR11937. Actin_like. 1 hit.
Pfam	PF00022. Actin. 1 hit. PF00646. F-box. 1 hit. [Graphical view]
SMART	SM00268. ACTIN. 1 hit. SM00256. FBOX. 1 hit. [Graphical view]
PROSITE	PS00406. ACTINS_1. False negative. PS00432. ACTINS_2. False negative. PS50181. FBOX. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

ARP8_ORYSJ

Accession

Primary (citable) accession number: Q7XR80
Secondary accession number(s): A3AYE8 , A8WAZ7, Q01ML6, Q0J983, Q259W4

Entry history

Integrated into UniProtKB/Swiss-Prot:	February 26, 2008
Last sequence update:	October 1, 2003
Last modified:	June 16, 2009
This is version 38 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

PPAP (Plant Proteome Annotation Project)