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Q7XR80 (ARP8_ORYSJ) Reviewed, UniProtKB/Swiss-Prot

Last modified June 11, 2014. Version 67. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Actin-related protein 8
Alternative name(s):
F-box protein ARP8
Gene names
Name:ARP8
Ordered Locus Names:Os04g0667700, LOC_Os04g57210
ORF Names:B0811B10.7, H1005F08.28, OsJ_015820, OSJNBa0043A12.5
OrganismOryza sativa subsp. japonica (Rice) [Reference proteome]
Taxonomic identifier39947 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza

Protein attributes

Sequence length484 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Subcellular location

Nucleusnucleolus By similarity. Cytoplasm By similarity. Note: Localized to the nucleolus in interphase cells and dispersed in the cytoplasm in mitotic cells By similarity.

Sequence similarities

Belongs to the actin family. Plant ARP8 subfamily.

Contains 1 F-box domain.

Sequence caution

The sequence AK100366 differs from that shown. Reason: Frameshift at positions 193 and 212.

The sequence BAF16104.1 differs from that shown. Reason: Erroneous gene model prediction.

The sequence CAJ86197.1 differs from that shown. Reason: Erroneous gene model prediction.

The sequence CM000141 differs from that shown. Reason: Frameshift at position 30.

Ontologies

Keywords
   Cellular componentCytoplasm
Nucleus
   LigandATP-binding
Nucleotide-binding
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Cellular_componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

nucleolus

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular_functionATP binding

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 484484Actin-related protein 8
PRO_0000320545

Regions

Domain44 – 9047F-box
Nucleotide binding262 – 2654ATP By similarity

Sequences

Sequence LengthMass (Da)Tools
Q7XR80 [UniParc].

Last modified October 1, 2003. Version 1.
Checksum: B2D5677782F3F1E1

FASTA48453,293
        10         20         30         40         50         60 
MAVLLRKVWG SVLARAAAGA APPEAFAAAA SPRRPQAAGE YGSLGALDVL PIDVLAQILR 

        70         80         90        100        110        120 
LLGPADAARS TAVCRAWRLL ASDNGLWAFF LRLGPDPWEL VVFAETHLGA GPALHPGLYY 

       130        140        150        160        170        180 
DSSPQLSFKH VYTRRAVVPG SIIVDGGSGY CKYGWSKYAA PSGRCATFLE FGNIESPMYA 

       190        200        210        220        230        240 
RLRHFLSTIY TRMQVKPSTQ PIIVVLPLCH SDDTESARAS RKQYRDTLYS VLFDMNVPAV 

       250        260        270        280        290        300 
CSVDQAVLAL YAAKRTSGIV VNIGFNATSI VPIFQGRVMH EIGVETVGQG ALKLTGFLKE 

       310        320        330        340        350        360 
LMQQRNITFE SLYTVRTIKE KLCYVAADYE AEKRKDTQAS CEVDGEGWFT LSEERFKTAE 

       370        380        390        400        410        420 
ILFQPQIGGV RAMGLHKAVS LCMDHCYNSE VFGDDNWYKT VVLSGGSSCL PGLSERLEKE 

       430        440        450        460        470        480 
LRELLPAHIS EGIRVIPPPF GTDSAWFGAK MISNVSTFTE AWCIKKKQFR QKTRRNGPSF 


VNVW 

« Hide

References

« Hide 'large scale' references
[1]"The extent of linkage disequilibrium in rice (Oryza sativa L.)."
Mather K.A., Caicedo A.L., Polato N.R., Olsen K.M., McCouch S., Purugganan M.D.
Genetics 177:2223-2232(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
[2]"Sequence and analysis of rice chromosome 4."
Feng Q., Zhang Y., Hao P., Wang S., Fu G., Huang Y., Li Y., Zhu J., Liu Y., Hu X., Jia P., Zhang Y., Zhao Q., Ying K., Yu S., Tang Y., Weng Q., Zhang L. expand/collapse author list , Lu Y., Mu J., Lu Y., Zhang L.S., Yu Z., Fan D., Liu X., Lu T., Li C., Wu Y., Sun T., Lei H., Li T., Hu H., Guan J., Wu M., Zhang R., Zhou B., Chen Z., Chen L., Jin Z., Wang R., Yin H., Cai Z., Ren S., Lv G., Gu W., Zhu G., Tu Y., Jia J., Zhang Y., Chen J., Kang H., Chen X., Shao C., Sun Y., Hu Q., Zhang X., Zhang W., Wang L., Ding C., Sheng H., Gu J., Chen S., Ni L., Zhu F., Chen W., Lan L., Lai Y., Cheng Z., Gu M., Jiang J., Li J., Hong G., Xue Y., Han B.
Nature 420:316-320(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[3]"The map-based sequence of the rice genome."
International rice genome sequencing project (IRGSP)
Nature 436:793-800(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[4]"The rice annotation project database (RAP-DB): 2008 update."
The rice annotation project (RAP)
Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: cv. Nipponbare.
[5]"The genomes of Oryza sativa: a history of duplications."
Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L. expand/collapse author list , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.
PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[6]"Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
The rice full-length cDNA consortium
Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: cv. Nipponbare.
[7]"Plant actin-related proteins."
Kandasamy M.K., Deal R.B., McKinney E.C., Meagher R.B.
Trends Plant Sci. 9:196-202(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: REVIEW, GENE FAMILY, NOMENCLATURE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
EU214983 Genomic DNA. Translation: ABW90794.1.
EU214984 Genomic DNA. Translation: ABW90795.1.
EU214985 Genomic DNA. Translation: ABW90796.1.
EU214986 Genomic DNA. Translation: ABW90797.1.
EU214987 Genomic DNA. Translation: ABW90798.1.
EU214988 Genomic DNA. Translation: ABW90799.1.
EU215015 Genomic DNA. Translation: ABW90826.1.
EU215016 Genomic DNA. Translation: ABW90827.1.
EU215017 Genomic DNA. Translation: ABW90828.1.
EU215018 Genomic DNA. Translation: ABW90829.1.
EU215019 Genomic DNA. Translation: ABW90830.1.
EU215020 Genomic DNA. Translation: ABW90831.1.
EU215021 Genomic DNA. Translation: ABW90832.1.
EU215022 Genomic DNA. Translation: ABW90833.1.
EU215023 Genomic DNA. Translation: ABW90834.1.
EU215024 Genomic DNA. Translation: ABW90835.1.
EU215025 Genomic DNA. Translation: ABW90836.1.
EU215026 Genomic DNA. Translation: ABW90837.1.
EU215027 Genomic DNA. Translation: ABW90838.1.
EU215028 Genomic DNA. Translation: ABW90839.1.
EU215029 Genomic DNA. Translation: ABW90840.1.
EU215030 Genomic DNA. Translation: ABW90841.1.
EU215031 Genomic DNA. Translation: ABW90842.1.
EU215032 Genomic DNA. Translation: ABW90843.1.
EU215033 Genomic DNA. Translation: ABW90844.1.
EU215034 Genomic DNA. Translation: ABW90845.1.
EU215035 Genomic DNA. Translation: ABW90846.1.
EU215036 Genomic DNA. Translation: ABW90847.1.
EU215037 Genomic DNA. Translation: ABW90848.1.
EU215038 Genomic DNA. Translation: ABW90849.1.
EU215039 Genomic DNA. Translation: ABW90850.1.
EU215041 Genomic DNA. Translation: ABW90852.1.
EU215042 Genomic DNA. Translation: ABW90853.1.
EU215043 Genomic DNA. Translation: ABW90854.1.
EU215044 Genomic DNA. Translation: ABW90855.1.
EU215045 Genomic DNA. Translation: ABW90856.1.
EU215046 Genomic DNA. Translation: ABW90857.1.
EU215047 Genomic DNA. Translation: ABW90858.1.
EU215048 Genomic DNA. Translation: ABW90859.1.
EU215049 Genomic DNA. Translation: ABW90860.1.
EU215050 Genomic DNA. Translation: ABW90861.1.
EU215051 Genomic DNA. Translation: ABW90862.1.
EU215052 Genomic DNA. Translation: ABW90863.1.
EU215053 Genomic DNA. Translation: ABW90864.1.
EU215054 Genomic DNA. Translation: ABW90865.1.
AL606619 Genomic DNA. Translation: CAE02800.1.
AL732340 Genomic DNA. Translation: CAJ86197.1. Sequence problems.
AP008210 Genomic DNA. Translation: BAF16104.1. Sequence problems.
CM000141 Genomic DNA. No translation available.
AK100366 mRNA. No translation available.
RefSeqNP_001054190.1. NM_001060725.1.
UniGeneOs.9650.

3D structure databases

ProteinModelPortalQ7XR80.
ModBaseSearch...
MobiDBSearch...

Proteomic databases

PRIDEQ7XR80.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4337330.
KEGGosa:4337330.

Organism-specific databases

GrameneQ7XR80.

Phylogenomic databases

eggNOGCOG5277.
KOK16616.

Family and domain databases

InterProIPR004000. Actin-related.
IPR001810. F-box_dom.
[Graphical view]
PANTHERPTHR11937. PTHR11937. 1 hit.
PfamPF00022. Actin. 1 hit.
PF12937. F-box-like. 1 hit.
[Graphical view]
SMARTSM00268. ACTIN. 1 hit.
SM00256. FBOX. 1 hit.
[Graphical view]
SUPFAMSSF81383. SSF81383. 1 hit.
PROSITEPS50181. FBOX. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameARP8_ORYSJ
AccessionPrimary (citable) accession number: Q7XR80
Secondary accession number(s): A3AYE8 expand/collapse secondary AC list , A8WAZ7, Q01ML6, Q0J983, Q259W4
Entry history
Integrated into UniProtKB/Swiss-Prot: February 26, 2008
Last sequence update: October 1, 2003
Last modified: June 11, 2014
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Oryza sativa (rice)

Index of Oryza sativa entries and their corresponding gene designations