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Q7XR80

- ARP8_ORYSJ

UniProt

Q7XR80 - ARP8_ORYSJ

Protein

Actin-related protein 8

Gene

ARP8

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 68 (01 Oct 2014)
      Sequence version 1 (01 Oct 2003)
      Previous versions | rss
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    Functioni

    Regions

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Nucleotide bindingi262 – 2654ATPBy similarity

    GO - Molecular functioni

    1. ATP binding Source: UniProtKB-KW

    Keywords - Ligandi

    ATP-binding, Nucleotide-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Actin-related protein 8
    Alternative name(s):
    F-box protein ARP8
    Gene namesi
    Name:ARP8
    Ordered Locus Names:Os04g0667700, LOC_Os04g57210
    ORF Names:B0811B10.7, H1005F08.28, OsJ_015820, OSJNBa0043A12.5
    OrganismiOryza sativa subsp. japonica (Rice)
    Taxonomic identifieri39947 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
    ProteomesiUP000000763: Chromosome 4

    Organism-specific databases

    GrameneiQ7XR80.

    Subcellular locationi

    Nucleusnucleolus By similarity. Cytoplasm By similarity
    Note: Localized to the nucleolus in interphase cells and dispersed in the cytoplasm in mitotic cells.By similarity

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell
    2. nucleolus Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cytoplasm, Nucleus

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 484484Actin-related protein 8PRO_0000320545Add
    BLAST

    Proteomic databases

    PRIDEiQ7XR80.

    Structurei

    3D structure databases

    ProteinModelPortaliQ7XR80.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini44 – 9047F-boxPROSITE-ProRule annotationAdd
    BLAST

    Sequence similaritiesi

    Belongs to the actin family. Plant ARP8 subfamily.Curated
    Contains 1 F-box domain.PROSITE-ProRule annotation

    Phylogenomic databases

    eggNOGiCOG5277.
    KOiK16616.

    Family and domain databases

    InterProiIPR004000. Actin-related.
    IPR001810. F-box_dom.
    [Graphical view]
    PANTHERiPTHR11937. PTHR11937. 1 hit.
    PfamiPF00022. Actin. 1 hit.
    PF12937. F-box-like. 1 hit.
    [Graphical view]
    SMARTiSM00268. ACTIN. 1 hit.
    SM00256. FBOX. 1 hit.
    [Graphical view]
    SUPFAMiSSF81383. SSF81383. 1 hit.
    PROSITEiPS50181. FBOX. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q7XR80-1 [UniParc]FASTAAdd to Basket

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    MAVLLRKVWG SVLARAAAGA APPEAFAAAA SPRRPQAAGE YGSLGALDVL    50
    PIDVLAQILR LLGPADAARS TAVCRAWRLL ASDNGLWAFF LRLGPDPWEL 100
    VVFAETHLGA GPALHPGLYY DSSPQLSFKH VYTRRAVVPG SIIVDGGSGY 150
    CKYGWSKYAA PSGRCATFLE FGNIESPMYA RLRHFLSTIY TRMQVKPSTQ 200
    PIIVVLPLCH SDDTESARAS RKQYRDTLYS VLFDMNVPAV CSVDQAVLAL 250
    YAAKRTSGIV VNIGFNATSI VPIFQGRVMH EIGVETVGQG ALKLTGFLKE 300
    LMQQRNITFE SLYTVRTIKE KLCYVAADYE AEKRKDTQAS CEVDGEGWFT 350
    LSEERFKTAE ILFQPQIGGV RAMGLHKAVS LCMDHCYNSE VFGDDNWYKT 400
    VVLSGGSSCL PGLSERLEKE LRELLPAHIS EGIRVIPPPF GTDSAWFGAK 450
    MISNVSTFTE AWCIKKKQFR QKTRRNGPSF VNVW 484
    Length:484
    Mass (Da):53,293
    Last modified:October 1, 2003 - v1
    Checksum:iB2D5677782F3F1E1
    GO

    Sequence cautioni

    The sequence AK100366 differs from that shown. Reason: Frameshift at positions 193 and 212.
    The sequence CM000141 differs from that shown. Reason: Frameshift at position 30.
    The sequence BAF16104.1 differs from that shown. Reason: Erroneous gene model prediction.
    The sequence CAJ86197.1 differs from that shown. Reason: Erroneous gene model prediction.

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    EU214983 Genomic DNA. Translation: ABW90794.1.
    EU214984 Genomic DNA. Translation: ABW90795.1.
    EU214985 Genomic DNA. Translation: ABW90796.1.
    EU214986 Genomic DNA. Translation: ABW90797.1.
    EU214987 Genomic DNA. Translation: ABW90798.1.
    EU214988 Genomic DNA. Translation: ABW90799.1.
    EU215015 Genomic DNA. Translation: ABW90826.1.
    EU215016 Genomic DNA. Translation: ABW90827.1.
    EU215017 Genomic DNA. Translation: ABW90828.1.
    EU215018 Genomic DNA. Translation: ABW90829.1.
    EU215019 Genomic DNA. Translation: ABW90830.1.
    EU215020 Genomic DNA. Translation: ABW90831.1.
    EU215021 Genomic DNA. Translation: ABW90832.1.
    EU215022 Genomic DNA. Translation: ABW90833.1.
    EU215023 Genomic DNA. Translation: ABW90834.1.
    EU215024 Genomic DNA. Translation: ABW90835.1.
    EU215025 Genomic DNA. Translation: ABW90836.1.
    EU215026 Genomic DNA. Translation: ABW90837.1.
    EU215027 Genomic DNA. Translation: ABW90838.1.
    EU215028 Genomic DNA. Translation: ABW90839.1.
    EU215029 Genomic DNA. Translation: ABW90840.1.
    EU215030 Genomic DNA. Translation: ABW90841.1.
    EU215031 Genomic DNA. Translation: ABW90842.1.
    EU215032 Genomic DNA. Translation: ABW90843.1.
    EU215033 Genomic DNA. Translation: ABW90844.1.
    EU215034 Genomic DNA. Translation: ABW90845.1.
    EU215035 Genomic DNA. Translation: ABW90846.1.
    EU215036 Genomic DNA. Translation: ABW90847.1.
    EU215037 Genomic DNA. Translation: ABW90848.1.
    EU215038 Genomic DNA. Translation: ABW90849.1.
    EU215039 Genomic DNA. Translation: ABW90850.1.
    EU215041 Genomic DNA. Translation: ABW90852.1.
    EU215042 Genomic DNA. Translation: ABW90853.1.
    EU215043 Genomic DNA. Translation: ABW90854.1.
    EU215044 Genomic DNA. Translation: ABW90855.1.
    EU215045 Genomic DNA. Translation: ABW90856.1.
    EU215046 Genomic DNA. Translation: ABW90857.1.
    EU215047 Genomic DNA. Translation: ABW90858.1.
    EU215048 Genomic DNA. Translation: ABW90859.1.
    EU215049 Genomic DNA. Translation: ABW90860.1.
    EU215050 Genomic DNA. Translation: ABW90861.1.
    EU215051 Genomic DNA. Translation: ABW90862.1.
    EU215052 Genomic DNA. Translation: ABW90863.1.
    EU215053 Genomic DNA. Translation: ABW90864.1.
    EU215054 Genomic DNA. Translation: ABW90865.1.
    AL606619 Genomic DNA. Translation: CAE02800.1.
    AL732340 Genomic DNA. Translation: CAJ86197.1. Sequence problems.
    AP008210 Genomic DNA. Translation: BAF16104.1. Sequence problems.
    CM000141 Genomic DNA. No translation available.
    AK100366 mRNA. No translation available.
    RefSeqiNP_001054190.1. NM_001060725.1.
    UniGeneiOs.9650.

    Genome annotation databases

    GeneIDi4337330.
    KEGGiosa:4337330.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    EU214983 Genomic DNA. Translation: ABW90794.1 .
    EU214984 Genomic DNA. Translation: ABW90795.1 .
    EU214985 Genomic DNA. Translation: ABW90796.1 .
    EU214986 Genomic DNA. Translation: ABW90797.1 .
    EU214987 Genomic DNA. Translation: ABW90798.1 .
    EU214988 Genomic DNA. Translation: ABW90799.1 .
    EU215015 Genomic DNA. Translation: ABW90826.1 .
    EU215016 Genomic DNA. Translation: ABW90827.1 .
    EU215017 Genomic DNA. Translation: ABW90828.1 .
    EU215018 Genomic DNA. Translation: ABW90829.1 .
    EU215019 Genomic DNA. Translation: ABW90830.1 .
    EU215020 Genomic DNA. Translation: ABW90831.1 .
    EU215021 Genomic DNA. Translation: ABW90832.1 .
    EU215022 Genomic DNA. Translation: ABW90833.1 .
    EU215023 Genomic DNA. Translation: ABW90834.1 .
    EU215024 Genomic DNA. Translation: ABW90835.1 .
    EU215025 Genomic DNA. Translation: ABW90836.1 .
    EU215026 Genomic DNA. Translation: ABW90837.1 .
    EU215027 Genomic DNA. Translation: ABW90838.1 .
    EU215028 Genomic DNA. Translation: ABW90839.1 .
    EU215029 Genomic DNA. Translation: ABW90840.1 .
    EU215030 Genomic DNA. Translation: ABW90841.1 .
    EU215031 Genomic DNA. Translation: ABW90842.1 .
    EU215032 Genomic DNA. Translation: ABW90843.1 .
    EU215033 Genomic DNA. Translation: ABW90844.1 .
    EU215034 Genomic DNA. Translation: ABW90845.1 .
    EU215035 Genomic DNA. Translation: ABW90846.1 .
    EU215036 Genomic DNA. Translation: ABW90847.1 .
    EU215037 Genomic DNA. Translation: ABW90848.1 .
    EU215038 Genomic DNA. Translation: ABW90849.1 .
    EU215039 Genomic DNA. Translation: ABW90850.1 .
    EU215041 Genomic DNA. Translation: ABW90852.1 .
    EU215042 Genomic DNA. Translation: ABW90853.1 .
    EU215043 Genomic DNA. Translation: ABW90854.1 .
    EU215044 Genomic DNA. Translation: ABW90855.1 .
    EU215045 Genomic DNA. Translation: ABW90856.1 .
    EU215046 Genomic DNA. Translation: ABW90857.1 .
    EU215047 Genomic DNA. Translation: ABW90858.1 .
    EU215048 Genomic DNA. Translation: ABW90859.1 .
    EU215049 Genomic DNA. Translation: ABW90860.1 .
    EU215050 Genomic DNA. Translation: ABW90861.1 .
    EU215051 Genomic DNA. Translation: ABW90862.1 .
    EU215052 Genomic DNA. Translation: ABW90863.1 .
    EU215053 Genomic DNA. Translation: ABW90864.1 .
    EU215054 Genomic DNA. Translation: ABW90865.1 .
    AL606619 Genomic DNA. Translation: CAE02800.1 .
    AL732340 Genomic DNA. Translation: CAJ86197.1 . Sequence problems.
    AP008210 Genomic DNA. Translation: BAF16104.1 . Sequence problems.
    CM000141 Genomic DNA. No translation available.
    AK100366 mRNA. No translation available.
    RefSeqi NP_001054190.1. NM_001060725.1.
    UniGenei Os.9650.

    3D structure databases

    ProteinModelPortali Q7XR80.
    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PRIDEi Q7XR80.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 4337330.
    KEGGi osa:4337330.

    Organism-specific databases

    Gramenei Q7XR80.

    Phylogenomic databases

    eggNOGi COG5277.
    KOi K16616.

    Family and domain databases

    InterProi IPR004000. Actin-related.
    IPR001810. F-box_dom.
    [Graphical view ]
    PANTHERi PTHR11937. PTHR11937. 1 hit.
    Pfami PF00022. Actin. 1 hit.
    PF12937. F-box-like. 1 hit.
    [Graphical view ]
    SMARTi SM00268. ACTIN. 1 hit.
    SM00256. FBOX. 1 hit.
    [Graphical view ]
    SUPFAMi SSF81383. SSF81383. 1 hit.
    PROSITEi PS50181. FBOX. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The extent of linkage disequilibrium in rice (Oryza sativa L.)."
      Mather K.A., Caicedo A.L., Polato N.R., Olsen K.M., McCouch S., Purugganan M.D.
      Genetics 177:2223-2232(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    4. "The rice annotation project database (RAP-DB): 2008 update."
      The rice annotation project (RAP)
      Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENOME REANNOTATION.
      Strain: cv. Nipponbare.
    5. "The genomes of Oryza sativa: a history of duplications."
      Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.
      , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.
      PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    6. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
      The rice full-length cDNA consortium
      Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: cv. Nipponbare.
    7. Cited for: REVIEW, GENE FAMILY, NOMENCLATURE.

    Entry informationi

    Entry nameiARP8_ORYSJ
    AccessioniPrimary (citable) accession number: Q7XR80
    Secondary accession number(s): A3AYE8
    , A8WAZ7, Q01ML6, Q0J983, Q259W4
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: February 26, 2008
    Last sequence update: October 1, 2003
    Last modified: October 1, 2014
    This is version 68 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Oryza sativa (rice)
      Index of Oryza sativa entries and their corresponding gene designations
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3