Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

Q7XKV2

- BGL13_ORYSJ

UniProt

Q7XKV2 - BGL13_ORYSJ

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

Beta-glucosidase 13

Gene

BGLU13

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli

Functioni

Catalytic activityi

Hydrolysis of terminal, non-reducing beta-D-glucosyl residues with release of beta-D-glucose.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei49 – 491SubstrateBy similarity
Binding sitei153 – 1531SubstrateBy similarity
Binding sitei198 – 1981SubstrateBy similarity
Active sitei199 – 1991Proton donorBy similarity
Binding sitei342 – 3421SubstrateBy similarity
Active sitei413 – 4131NucleophileBy similarity
Binding sitei462 – 4621SubstrateBy similarity

GO - Molecular functioni

  1. beta-glucosidase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Glycosidase, Hydrolase

Protein family/group databases

CAZyiGH1. Glycoside Hydrolase Family 1.

Names & Taxonomyi

Protein namesi
Recommended name:
Beta-glucosidase 13 (EC:3.2.1.21)
Short name:
Os4bglu13
Gene namesi
Name:BGLU13
Ordered Locus Names:Os04g0474900, LOC_Os04g39900
ORF Names:OsJ_15167, OSJNBa0022H21.5
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 4

Organism-specific databases

GrameneiQ7XKV2.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2525Sequence AnalysisAdd
BLAST
Chaini26 – 506481Beta-glucosidase 13PRO_0000390330Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi118 – 1181N-linked (GlcNAc...)Sequence Analysis
Disulfide bondi219 ↔ 226By similarity
Glycosylationi225 – 2251N-linked (GlcNAc...)Sequence Analysis
Glycosylationi357 – 3571N-linked (GlcNAc...)Sequence Analysis
Glycosylationi367 – 3671N-linked (GlcNAc...)Sequence Analysis
Glycosylationi421 – 4211N-linked (GlcNAc...)Sequence Analysis

Keywords - PTMi

Disulfide bond, Glycoprotein

Structurei

3D structure databases

ProteinModelPortaliQ7XKV2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni469 – 4702Substrate bindingBy similarity

Sequence similaritiesi

Belongs to the glycosyl hydrolase 1 family.Curated

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiCOG2723.
InParanoidiQ7XKV2.
KOiK01188.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10353. PTHR10353. 1 hit.
PfamiPF00232. Glyco_hydro_1. 1 hit.
[Graphical view]
PRINTSiPR00131. GLHYDRLASE1.
SUPFAMiSSF51445. SSF51445. 1 hit.
PROSITEiPS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q7XKV2-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAAAGEVVML GGILLPLLLV VAVSGEPPPI SRRSFPEGFI FGTASSSYQY
60 70 80 90 100
EGGAREGGRG PSIWDTFTHQ HPDKIADKSN GDVAADSYHL YKEDVRIMKD
110 120 130 140 150
MGVDAYRFSI SWTRILPNGS LSGGINREGI SYYNNLINEL LLKGVQPFVT
160 170 180 190 200
LFHWDSPQAL EDKYNGFLSP NIINDYKEYA ETCFKEFGDR VKHWITFNEP
210 220 230 240 250
LSFCVAGYAS GGMFAPGRCS PWEGNCSAGD SGREPYTACH HQLLAHAETV
260 270 280 290 300
RLYKEKYQVL QKGKIGITLV SNWFVPFSRS KSNIDAARRA LDFMLGWFMD
310 320 330 340 350
PLIRGEYPLS MRELVRNRLP QFTKEQSELI KGSFDFIGLN YYTSNYAGSL
360 370 380 390 400
PPSNGLNNSY STDARANLTA VRNGIPIGPQ AASPWLYIYP QGFRELVLYV
410 420 430 440 450
KENYGNPTIY ITENGVDEFN NKTLPLQEAL KDDTRIDYYH KHLLSLLSAI
460 470 480 490 500
RDGANVKGYF AWSLLDNFEW SNGYTVRFGI NFVDYNDGAK RYPKMSAHWF

KEFLQK
Length:506
Mass (Da):57,137
Last modified:March 1, 2004 - v2
Checksum:i34FC02FA30B125D6
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL731582 Genomic DNA. Translation: CAE05485.2.
AP008210 Genomic DNA. Translation: BAF14985.1.
CM000141 Genomic DNA. Translation: EEE61180.1.
AK070962 mRNA. No translation available.
RefSeqiNP_001053071.1. NM_001059606.1.
UniGeneiOs.8442.

Genome annotation databases

EnsemblPlantsiOS04T0474900-01; OS04T0474900-01; OS04G0474900.
GeneIDi4336146.
KEGGiosa:4336146.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL731582 Genomic DNA. Translation: CAE05485.2 .
AP008210 Genomic DNA. Translation: BAF14985.1 .
CM000141 Genomic DNA. Translation: EEE61180.1 .
AK070962 mRNA. No translation available.
RefSeqi NP_001053071.1. NM_001059606.1.
UniGenei Os.8442.

3D structure databases

ProteinModelPortali Q7XKV2.
ModBasei Search...
MobiDBi Search...

Protein family/group databases

CAZyi GH1. Glycoside Hydrolase Family 1.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi OS04T0474900-01 ; OS04T0474900-01 ; OS04G0474900 .
GeneIDi 4336146.
KEGGi osa:4336146.

Organism-specific databases

Gramenei Q7XKV2.

Phylogenomic databases

eggNOGi COG2723.
InParanoidi Q7XKV2.
KOi K01188.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10353. PTHR10353. 1 hit.
Pfami PF00232. Glyco_hydro_1. 1 hit.
[Graphical view ]
PRINTSi PR00131. GLHYDRLASE1.
SUPFAMi SSF51445. SSF51445. 1 hit.
PROSITEi PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  3. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.
  4. "The genomes of Oryza sativa: a history of duplications."
    Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.
    , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.
    PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  5. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
    The rice full-length cDNA consortium
    Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Nipponbare.
  6. "Analysis of rice glycosyl hydrolase family 1 and expression of Os4bglu12 beta-glucosidase."
    Opassiri R., Pomthong B., Onkoksoong T., Akiyama T., Esen A., Ketudat Cairns J.R.
    BMC Plant Biol. 6:33-33(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENE FAMILY, NOMENCLATURE.

Entry informationi

Entry nameiBGL13_ORYSJ
AccessioniPrimary (citable) accession number: Q7XKV2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 15, 2009
Last sequence update: March 1, 2004
Last modified: October 29, 2014
This is version 78 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3