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Q7XKF3 (PORA_ORYSJ) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 82. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Protochlorophyllide reductase A, chloroplastic

Short name=PCR A
EC=1.3.1.33
Alternative name(s):
NADPH-protochlorophyllide oxidoreductase A
Short name=POR A
Gene names
Name:PORA
Ordered Locus Names:Os04g0678700, LOC_Os04g58200
ORF Names:OsJ_16634, OSJNBb0017I01.1
OrganismOryza sativa subsp. japonica (Rice) [Reference proteome]
Taxonomic identifier39947 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza

Protein attributes

Sequence length387 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at transcript level

General annotation (Comments)

Function

Phototransformation of protochlorophyllide (Pchlide) to chlorophyllide (Chlide).

Catalytic activity

Chlorophyllide a + NADP+ = protochlorophyllide + NADPH.

Pathway

Porphyrin-containing compound metabolism; chlorophyll biosynthesis.

Subcellular location

Plastidchloroplast By similarity.

Sequence similarities

Belongs to the short-chain dehydrogenases/reductases (SDR) family. POR subfamily.

Ontologies

Keywords
   Biological processChlorophyll biosynthesis
Photosynthesis
   Cellular componentChloroplast
Plastid
   DomainTransit peptide
   LigandNADP
   Molecular functionOxidoreductase
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processchlorophyll biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-UniPathway

photosynthesis

Inferred from electronic annotation. Source: UniProtKB-KW

response to ethylene

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

   Cellular_componentchloroplast envelope

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

chloroplast thylakoid membrane

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

   Molecular_functionNADPH dehydrogenase activity

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

protochlorophyllide reductase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Transit peptide1 – 3535Chloroplast Potential
Chain36 – 387352Protochlorophyllide reductase A, chloroplastic
PRO_0000376076

Sequences

Sequence LengthMass (Da)Tools
Q7XKF3 [UniParc].

Last modified October 1, 2003. Version 1.
Checksum: 1C3BA7DD699EF234

FASTA38741,183
        10         20         30         40         50         60 
MALQVQAALL PSALSVPKKG NLSAVVKEPG FLSVSQKAKK PSLVVRAVAT PAAPVASPGA 

        70         80         90        100        110        120 
GTSKADGKKT LRQGVVVITG ASSGLGLAAA KALAETGKWH VVMACRDFLK AATAAKAAGM 

       130        140        150        160        170        180 
AAGSYTVMHL DLASLDSVRQ FVDNFRRSGM PLDALVCNAA IYRPTARQPT FTADGYEMSV 

       190        200        210        220        230        240 
GVNHLGHFLL ARLMLDDLKK SDYPSRRLII LGSITGNTNT LAGNVPPKAG LGDLRGLAGG 

       250        260        270        280        290        300 
LRGQNGSAMI DGAESFDGAK AYKDSKICNM LTMQEFHRRF HEETGITFAS LYPGCIATTG 

       310        320        330        340        350        360 
LFREHIPLFR LLFPPFQRFV TKGFVSEAES GKRLAQVVGD PSLTKSGVYW SWNKDSASFE 

       370        380 
NQLSQEASDP EKARKLWDLS EKLVGLV 

« Hide

References

« Hide 'large scale' references
[1]"Sequence and analysis of rice chromosome 4."
Feng Q., Zhang Y., Hao P., Wang S., Fu G., Huang Y., Li Y., Zhu J., Liu Y., Hu X., Jia P., Zhang Y., Zhao Q., Ying K., Yu S., Tang Y., Weng Q., Zhang L. expand/collapse author list , Lu Y., Mu J., Lu Y., Zhang L.S., Yu Z., Fan D., Liu X., Lu T., Li C., Wu Y., Sun T., Lei H., Li T., Hu H., Guan J., Wu M., Zhang R., Zhou B., Chen Z., Chen L., Jin Z., Wang R., Yin H., Cai Z., Ren S., Lv G., Gu W., Zhu G., Tu Y., Jia J., Zhang Y., Chen J., Kang H., Chen X., Shao C., Sun Y., Hu Q., Zhang X., Zhang W., Wang L., Ding C., Sheng H., Gu J., Chen S., Ni L., Zhu F., Chen W., Lan L., Lai Y., Cheng Z., Gu M., Jiang J., Li J., Hong G., Xue Y., Han B.
Nature 420:316-320(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[2]"The map-based sequence of the rice genome."
International rice genome sequencing project (IRGSP)
Nature 436:793-800(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[3]"The rice annotation project database (RAP-DB): 2008 update."
The rice annotation project (RAP)
Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: cv. Nipponbare.
[4]"The genomes of Oryza sativa: a history of duplications."
Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L. expand/collapse author list , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.
PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[5]"Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
The rice full-length cDNA consortium
Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: cv. Nipponbare.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AL606456 Genomic DNA. Translation: CAE05721.1.
AP008210 Genomic DNA. Translation: BAF16188.1.
CM000141 Genomic DNA. Translation: EAZ32424.1.
AK065236 mRNA. Translation: BAG89429.1.
AK103940 mRNA. Translation: BAG96333.1.
AK104855 mRNA. Translation: BAG96996.1.
RefSeqNP_001054274.1. NM_001060809.1.
UniGeneOs.12363.

3D structure databases

ProteinModelPortalQ7XKF3.
ModBaseSearch...
MobiDBSearch...

Proteomic databases

PaxDbQ7XKF3.
PRIDEQ7XKF3.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsOS04T0678700-01; OS04T0678700-01; OS04G0678700.
GeneID4337415.
KEGGosa:4337415.

Organism-specific databases

GrameneQ7XKF3.

Phylogenomic databases

eggNOGCOG1028.
KOK00218.
OMAFLLCNLM.

Enzyme and pathway databases

UniPathwayUPA00668.

Family and domain databases

Gene3D3.40.50.720. 2 hits.
InterProIPR002198. DH_sc/Rdtase_SDR.
IPR002347. Glc/ribitol_DH.
IPR016040. NAD(P)-bd_dom.
IPR005979. Prochl_reduct.
[Graphical view]
PfamPF00106. adh_short. 1 hit.
[Graphical view]
PRINTSPR00081. GDHRDH.
TIGRFAMsTIGR01289. LPOR. 1 hit.
ProtoNetSearch...

Entry information

Entry namePORA_ORYSJ
AccessionPrimary (citable) accession number: Q7XKF3
Entry history
Integrated into UniProtKB/Swiss-Prot: May 26, 2009
Last sequence update: October 1, 2003
Last modified: May 14, 2014
This is version 82 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Oryza sativa (rice)

Index of Oryza sativa entries and their corresponding gene designations

PATHWAY comments

Index of metabolic and biosynthesis pathways