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Q7XKF3

- PORA_ORYSJ

UniProt

Q7XKF3 - PORA_ORYSJ

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Protein
Protochlorophyllide reductase A, chloroplastic
Gene
PORA, Os04g0678700, LOC_Os04g58200, OsJ_16634, OSJNBb0017I01.1
Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 3 out of 5 - Experimental evidence at transcript leveli

Functioni

Phototransformation of protochlorophyllide (Pchlide) to chlorophyllide (Chlide).

Catalytic activityi

Chlorophyllide a + NADP+ = protochlorophyllide + NADPH.

Pathwayi

GO - Molecular functioni

  1. NADPH dehydrogenase activity Source: EnsemblPlants/Gramene
  2. protochlorophyllide reductase activity Source: UniProtKB-EC

GO - Biological processi

  1. chlorophyll biosynthetic process Source: UniProtKB-UniPathway
  2. photosynthesis Source: UniProtKB-KW
  3. response to ethylene Source: EnsemblPlants/Gramene
Complete GO annotation...

Keywords - Molecular functioni

Oxidoreductase

Keywords - Biological processi

Chlorophyll biosynthesis, Photosynthesis

Keywords - Ligandi

NADP

Enzyme and pathway databases

UniPathwayiUPA00668.

Names & Taxonomyi

Protein namesi
Recommended name:
Protochlorophyllide reductase A, chloroplastic (EC:1.3.1.33)
Short name:
PCR A
Alternative name(s):
NADPH-protochlorophyllide oxidoreductase A
Short name:
POR A
Gene namesi
Name:PORA
Ordered Locus Names:Os04g0678700, LOC_Os04g58200
ORF Names:OsJ_16634, OSJNBb0017I01.1
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 4

Organism-specific databases

GrameneiQ7XKF3.

Subcellular locationi

Plastidchloroplast By similarity

GO - Cellular componenti

  1. chloroplast envelope Source: EnsemblPlants/Gramene
  2. chloroplast thylakoid membrane Source: EnsemblPlants/Gramene
Complete GO annotation...

Keywords - Cellular componenti

Chloroplast, Plastid

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transit peptidei1 – 3535Chloroplast Reviewed prediction
Add
BLAST
Chaini36 – 387352Protochlorophyllide reductase A, chloroplastic
PRO_0000376076Add
BLAST

Proteomic databases

PaxDbiQ7XKF3.
PRIDEiQ7XKF3.

Structurei

3D structure databases

ProteinModelPortaliQ7XKF3.

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transit peptide

Phylogenomic databases

eggNOGiCOG1028.
KOiK00218.
OMAiFLLCNLM.

Family and domain databases

Gene3Di3.40.50.720. 2 hits.
InterProiIPR002198. DH_sc/Rdtase_SDR.
IPR002347. Glc/ribitol_DH.
IPR016040. NAD(P)-bd_dom.
IPR005979. Prochl_reduct.
[Graphical view]
PfamiPF00106. adh_short. 1 hit.
[Graphical view]
PRINTSiPR00081. GDHRDH.
TIGRFAMsiTIGR01289. LPOR. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q7XKF3-1 [UniParc]FASTAAdd to Basket

« Hide

MALQVQAALL PSALSVPKKG NLSAVVKEPG FLSVSQKAKK PSLVVRAVAT    50
PAAPVASPGA GTSKADGKKT LRQGVVVITG ASSGLGLAAA KALAETGKWH 100
VVMACRDFLK AATAAKAAGM AAGSYTVMHL DLASLDSVRQ FVDNFRRSGM 150
PLDALVCNAA IYRPTARQPT FTADGYEMSV GVNHLGHFLL ARLMLDDLKK 200
SDYPSRRLII LGSITGNTNT LAGNVPPKAG LGDLRGLAGG LRGQNGSAMI 250
DGAESFDGAK AYKDSKICNM LTMQEFHRRF HEETGITFAS LYPGCIATTG 300
LFREHIPLFR LLFPPFQRFV TKGFVSEAES GKRLAQVVGD PSLTKSGVYW 350
SWNKDSASFE NQLSQEASDP EKARKLWDLS EKLVGLV 387
Length:387
Mass (Da):41,183
Last modified:October 1, 2003 - v1
Checksum:i1C3BA7DD699EF234
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL606456 Genomic DNA. Translation: CAE05721.1.
AP008210 Genomic DNA. Translation: BAF16188.1.
CM000141 Genomic DNA. Translation: EAZ32424.1.
AK065236 mRNA. Translation: BAG89429.1.
AK103940 mRNA. Translation: BAG96333.1.
AK104855 mRNA. Translation: BAG96996.1.
RefSeqiNP_001054274.1. NM_001060809.1.
UniGeneiOs.12363.

Genome annotation databases

EnsemblPlantsiOS04T0678700-01; OS04T0678700-01; OS04G0678700.
GeneIDi4337415.
KEGGiosa:4337415.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL606456 Genomic DNA. Translation: CAE05721.1 .
AP008210 Genomic DNA. Translation: BAF16188.1 .
CM000141 Genomic DNA. Translation: EAZ32424.1 .
AK065236 mRNA. Translation: BAG89429.1 .
AK103940 mRNA. Translation: BAG96333.1 .
AK104855 mRNA. Translation: BAG96996.1 .
RefSeqi NP_001054274.1. NM_001060809.1.
UniGenei Os.12363.

3D structure databases

ProteinModelPortali Q7XKF3.
ModBasei Search...
MobiDBi Search...

Proteomic databases

PaxDbi Q7XKF3.
PRIDEi Q7XKF3.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi OS04T0678700-01 ; OS04T0678700-01 ; OS04G0678700 .
GeneIDi 4337415.
KEGGi osa:4337415.

Organism-specific databases

Gramenei Q7XKF3.

Phylogenomic databases

eggNOGi COG1028.
KOi K00218.
OMAi FLLCNLM.

Enzyme and pathway databases

UniPathwayi UPA00668 .

Family and domain databases

Gene3Di 3.40.50.720. 2 hits.
InterProi IPR002198. DH_sc/Rdtase_SDR.
IPR002347. Glc/ribitol_DH.
IPR016040. NAD(P)-bd_dom.
IPR005979. Prochl_reduct.
[Graphical view ]
Pfami PF00106. adh_short. 1 hit.
[Graphical view ]
PRINTSi PR00081. GDHRDH.
TIGRFAMsi TIGR01289. LPOR. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  3. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.
  4. "The genomes of Oryza sativa: a history of duplications."
    Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.
    , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.
    PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  5. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
    The rice full-length cDNA consortium
    Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Nipponbare.

Entry informationi

Entry nameiPORA_ORYSJ
AccessioniPrimary (citable) accession number: Q7XKF3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 26, 2009
Last sequence update: October 1, 2003
Last modified: May 14, 2014
This is version 82 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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