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Q7XKF3

- PORA_ORYSJ

UniProt

Q7XKF3 - PORA_ORYSJ

Protein

Protochlorophyllide reductase A, chloroplastic

Gene

PORA

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 83 (01 Oct 2014)
      Sequence version 1 (01 Oct 2003)
      Previous versions | rss
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    Functioni

    Phototransformation of protochlorophyllide (Pchlide) to chlorophyllide (Chlide).

    Catalytic activityi

    Chlorophyllide a + NADP+ = protochlorophyllide + NADPH.

    Pathwayi

    GO - Molecular functioni

    1. NADPH dehydrogenase activity Source: EnsemblPlants/Gramene
    2. protochlorophyllide reductase activity Source: UniProtKB-EC

    GO - Biological processi

    1. chlorophyll biosynthetic process Source: UniProtKB-UniPathway
    2. photosynthesis Source: UniProtKB-KW
    3. response to ethylene Source: EnsemblPlants/Gramene

    Keywords - Molecular functioni

    Oxidoreductase

    Keywords - Biological processi

    Chlorophyll biosynthesis, Photosynthesis

    Keywords - Ligandi

    NADP

    Enzyme and pathway databases

    UniPathwayiUPA00668.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Protochlorophyllide reductase A, chloroplastic (EC:1.3.1.33)
    Short name:
    PCR A
    Alternative name(s):
    NADPH-protochlorophyllide oxidoreductase A
    Short name:
    POR A
    Gene namesi
    Name:PORA
    Ordered Locus Names:Os04g0678700, LOC_Os04g58200
    ORF Names:OsJ_16634, OSJNBb0017I01.1
    OrganismiOryza sativa subsp. japonica (Rice)
    Taxonomic identifieri39947 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
    ProteomesiUP000000763: Chromosome 4

    Organism-specific databases

    GrameneiQ7XKF3.

    Subcellular locationi

    Plastidchloroplast By similarity

    GO - Cellular componenti

    1. chloroplast envelope Source: EnsemblPlants/Gramene
    2. chloroplast thylakoid membrane Source: EnsemblPlants/Gramene

    Keywords - Cellular componenti

    Chloroplast, Plastid

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Transit peptidei1 – 3535ChloroplastSequence AnalysisAdd
    BLAST
    Chaini36 – 387352Protochlorophyllide reductase A, chloroplasticPRO_0000376076Add
    BLAST

    Proteomic databases

    PaxDbiQ7XKF3.
    PRIDEiQ7XKF3.

    Structurei

    3D structure databases

    ProteinModelPortaliQ7XKF3.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Keywords - Domaini

    Transit peptide

    Phylogenomic databases

    eggNOGiCOG1028.
    KOiK00218.
    OMAiFLLCNLM.

    Family and domain databases

    Gene3Di3.40.50.720. 2 hits.
    InterProiIPR002198. DH_sc/Rdtase_SDR.
    IPR002347. Glc/ribitol_DH.
    IPR016040. NAD(P)-bd_dom.
    IPR005979. Prochl_reduct.
    [Graphical view]
    PfamiPF00106. adh_short. 1 hit.
    [Graphical view]
    PRINTSiPR00081. GDHRDH.
    TIGRFAMsiTIGR01289. LPOR. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    Q7XKF3-1 [UniParc]FASTAAdd to Basket

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    MALQVQAALL PSALSVPKKG NLSAVVKEPG FLSVSQKAKK PSLVVRAVAT    50
    PAAPVASPGA GTSKADGKKT LRQGVVVITG ASSGLGLAAA KALAETGKWH 100
    VVMACRDFLK AATAAKAAGM AAGSYTVMHL DLASLDSVRQ FVDNFRRSGM 150
    PLDALVCNAA IYRPTARQPT FTADGYEMSV GVNHLGHFLL ARLMLDDLKK 200
    SDYPSRRLII LGSITGNTNT LAGNVPPKAG LGDLRGLAGG LRGQNGSAMI 250
    DGAESFDGAK AYKDSKICNM LTMQEFHRRF HEETGITFAS LYPGCIATTG 300
    LFREHIPLFR LLFPPFQRFV TKGFVSEAES GKRLAQVVGD PSLTKSGVYW 350
    SWNKDSASFE NQLSQEASDP EKARKLWDLS EKLVGLV 387
    Length:387
    Mass (Da):41,183
    Last modified:October 1, 2003 - v1
    Checksum:i1C3BA7DD699EF234
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL606456 Genomic DNA. Translation: CAE05721.1.
    AP008210 Genomic DNA. Translation: BAF16188.1.
    CM000141 Genomic DNA. Translation: EAZ32424.1.
    AK065236 mRNA. Translation: BAG89429.1.
    AK103940 mRNA. Translation: BAG96333.1.
    AK104855 mRNA. Translation: BAG96996.1.
    RefSeqiNP_001054274.1. NM_001060809.1.
    UniGeneiOs.12363.

    Genome annotation databases

    EnsemblPlantsiOS04T0678700-01; OS04T0678700-01; OS04G0678700.
    GeneIDi4337415.
    KEGGiosa:4337415.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL606456 Genomic DNA. Translation: CAE05721.1 .
    AP008210 Genomic DNA. Translation: BAF16188.1 .
    CM000141 Genomic DNA. Translation: EAZ32424.1 .
    AK065236 mRNA. Translation: BAG89429.1 .
    AK103940 mRNA. Translation: BAG96333.1 .
    AK104855 mRNA. Translation: BAG96996.1 .
    RefSeqi NP_001054274.1. NM_001060809.1.
    UniGenei Os.12363.

    3D structure databases

    ProteinModelPortali Q7XKF3.
    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PaxDbi Q7XKF3.
    PRIDEi Q7XKF3.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi OS04T0678700-01 ; OS04T0678700-01 ; OS04G0678700 .
    GeneIDi 4337415.
    KEGGi osa:4337415.

    Organism-specific databases

    Gramenei Q7XKF3.

    Phylogenomic databases

    eggNOGi COG1028.
    KOi K00218.
    OMAi FLLCNLM.

    Enzyme and pathway databases

    UniPathwayi UPA00668 .

    Family and domain databases

    Gene3Di 3.40.50.720. 2 hits.
    InterProi IPR002198. DH_sc/Rdtase_SDR.
    IPR002347. Glc/ribitol_DH.
    IPR016040. NAD(P)-bd_dom.
    IPR005979. Prochl_reduct.
    [Graphical view ]
    Pfami PF00106. adh_short. 1 hit.
    [Graphical view ]
    PRINTSi PR00081. GDHRDH.
    TIGRFAMsi TIGR01289. LPOR. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    3. "The rice annotation project database (RAP-DB): 2008 update."
      The rice annotation project (RAP)
      Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENOME REANNOTATION.
      Strain: cv. Nipponbare.
    4. "The genomes of Oryza sativa: a history of duplications."
      Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.
      , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.
      PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    5. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
      The rice full-length cDNA consortium
      Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: cv. Nipponbare.

    Entry informationi

    Entry nameiPORA_ORYSJ
    AccessioniPrimary (citable) accession number: Q7XKF3
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: May 26, 2009
    Last sequence update: October 1, 2003
    Last modified: October 1, 2014
    This is version 83 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    2. Oryza sativa (rice)
      Index of Oryza sativa entries and their corresponding gene designations
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3