Q7XJ98 (KATAM_ARATH) Reviewed, UniProtKB/Swiss-Prot
Last modified
December 14, 2011.
Version 53.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Xyloglucan galactosyltransferase KATAMARI1 EC=2.4.1.- Alternative name(s): Protein MURUS 3 | ||||||||
| Gene names |
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| Organism | Arabidopsis thaliana (Mouse-ear cress) | ||||||||
| Taxonomic identifier | 3702 [NCBI] | ||||||||
| Taxonomic lineage | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis |
Protein attributes
| Sequence length | 619 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Involved in the attachment of the Gal residue on the third xylosyl unit within the XXXG core structure of xyloglucan, the principal glycan that interlaces the cellulose microfibrils in plant cell wall. Interacts with actin and is required for the proper endomembrane organization and for the cell elongation. Not involved in the trafficking from the endoplasmic reticulum to the vacuoles. Ref.1 Ref.2 |
| Pathway | |
| Subcellular location | Golgi apparatus › Golgi stack membrane; Single-pass type II membrane protein Ref.2. |
| Tissue specificity | Ubiquitous. Ref.1 |
| Domain | The cytoplasmic N-terminal domain interacts with actin, while the lumenal C-terminal domain contributes to the activity of xyloglucan galactosyltransferase. |
| Sequence similarities | Belongs to the glycosyltransferase 47 family. |
| Sequence caution | The sequence AAD21751.1 differs from that shown. Reason: Erroneous gene model prediction. |
Ontologies
| Keywords | |
|---|---|
| Cellular component | Golgi apparatus Membrane |
| Domain | Signal-anchor Transmembrane Transmembrane helix |
| Molecular function | Glycosyltransferase Transferase |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological process | endomembrane system organization Inferred from mutant phenotype Ref.2. Source: TAIR fucose biosynthetic processInferred from mutant phenotype. Source: TAIR salicylic acid mediated signaling pathwayInferred from mutant phenotype. Source: TAIR unidimensional cell growthInferred from mutant phenotype Ref.2. Source: TAIR xyloglucan biosynthetic processInferred from mutant phenotype. Source: TAIR |
| Cellular component | Golgi cisterna membrane Inferred from electronic annotation. Source: UniProtKB-SubCell integral to Golgi membraneInferred from direct assay Ref.2. Source: TAIR |
| Molecular function | transferase activity, transferring glycosyl groups Inferred from direct assay Ref.1. Source: TAIR |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 619 | 619 | Xyloglucan galactosyltransferase KATAMARI1 | PRO_0000149667 | |||||
Regions | |||||||||
| Topological domain | 1 – 33 | 33 | Cytoplasmic | ||||||
| Transmembrane | 34 – 54 | 21 | Helical; Signal-anchor for type II membrane protein | ||||||
| Topological domain | 55 – 619 | 565 | Lumenal | ||||||
| Compositional bias | 85 – 124 | 40 | Pro-rich | ||||||
Experimental info | |||||||||
| Mutagenesis | 290 | 1 | A → V in mur3-2; altered xyloglucan, but normal endomembrane organization. Ref.1 | ||||||
| Mutagenesis | 470 | 1 | S → L in mur3-1; altered xyloglucan, but normal endomembrane organization. Ref.1 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "The MUR3 gene of Arabidopsis encodes a xyloglucan galactosyltransferase that is evolutionarily related to animal exostosins." Madson M., Dunand C., Li X., Verma R., Vanzin G.F., Caplan J., Shoue D.A., Carpita N.C., Reiter W.-D. Plant Cell 15:1662-1670(2003) [PubMed: 12837954] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA], FUNCTION, MUTAGENESIS OF ALA-290 AND SER-470, TISSUE SPECIFICITY. |
| [2] | "KATAMARI1/MURUS3 is a novel Golgi membrane protein that is required for endomembrane organization in Arabidopsis." Tamura K., Shimada T., Kondo M., Nishimura M., Hara-Nishimura I. Plant Cell 17:1764-1776(2005) [PubMed: 15863516] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA], FUNCTION, SUBCELLULAR LOCATION. |
| [3] | "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana." Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D., Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V., Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S., Cronin L.A. Venter J.C.Nature 402:761-768(1999) [PubMed: 10617197] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Columbia. |
| [4] | The Arabidopsis Information Resource (TAIR) Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases Cited for: GENOME REANNOTATION. Strain: cv. Columbia. |
| [5] | "Arabidopsis ORF clones." Cheuk R.F., Chen H., Kim C.J., Shinn P., Ecker J.R. Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Strain: cv. Columbia. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AY195743 Genomic DNA. Translation: AAO39815.1. AC006569 Genomic DNA. Translation: AAD21751.1. Sequence problems. CP002685 Genomic DNA. Translation: AEC06999.1. BT023734 mRNA. Translation: AAZ23926.1. |
| IPI | IPI00544087. |
| PIR | D84588. |
| RefSeq | NP_179627.2. NM_127596.2. |
| UniGene | At.39706. |
3D structure databases | |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | Q7XJ98. |
Protein family/group databases | |
| CAZy | GT47. Glycosyltransferase Family 47. |
Proteomic databases | |
| PRIDE | Q7XJ98. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| EnsemblPlants | AT2G20370.1; AT2G20370.1; AT2G20370. |
| GeneID | 816556. |
| GenomeReviews | Gene locus AT2G20370 in contig CT485783_GR. |
| KEGG | ath:AT2G20370. |
| NMPDR | fig|3702.1.peg.9032. |
Organism-specific databases | |
| TAIR | At2g20370. |
Phylogenomic databases | |
| GeneTree | EPGT00070000028089. |
| HOGENOM | HBG595076. |
| InParanoid | Q7XJ98. |
| OMA | RLIYADP. |
| PhylomeDB | Q7XJ98. |
| ProtClustDB | CLSN2690815. |
Enzyme and pathway databases | |
| BioCyc | MetaCyc:MONOMER-13996. |
Gene expression databases | |
| Genevestigator | Q7XJ98. |
| GermOnline | AT2G20370. Arabidopsis thaliana. |
Family and domain databases | |
| InterPro | IPR004263. Exostosin. [Graphical view] |
| Pfam | PF03016. Exostosin. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | KATAM_ARATH | ||||||||
| Accession | Primary (citable) accession number: Q7XJ98 Secondary accession number(s): Q494P2, Q9SK65 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Plant Protein Annotation Program | ||||||||
Relevant documents
| Arabidopsis thaliana Arabidopsis thaliana: entries and gene names |
| PATHWAY comments Index of metabolic and biosynthesis pathways |
| SIMILARITY comments Index of protein domains and families |

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