Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Q7XE50

- LAC16_ORYSJ

UniProt

Q7XE50 - LAC16_ORYSJ

Protein

Putative laccase-16

Gene

LAC16

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 3 out of 5- Protein uncertaini
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 68 (01 Oct 2014)
      Sequence version 1 (01 Oct 2003)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    Lignin degradation and detoxification of lignin-derived products.By similarity

    Catalytic activityi

    4 benzenediol + O2 = 4 benzosemiquinone + 2 H2O.

    Cofactori

    Binds 4 copper ions per monomer.By similarity

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Metal bindingi22 – 221Copper 1By similarity
    Metal bindingi24 – 241Copper 2By similarity
    Metal bindingi67 – 671Copper 2By similarity
    Metal bindingi69 – 691Copper 3By similarity
    Metal bindingi368 – 3681Copper 4By similarity
    Metal bindingi371 – 3711Copper 1By similarity
    Metal bindingi373 – 3731Copper 3By similarity
    Metal bindingi430 – 4301Copper 3By similarity
    Metal bindingi431 – 4311Copper 4By similarity
    Metal bindingi432 – 4321Copper 2By similarity
    Metal bindingi436 – 4361Copper 4By similarity
    Metal bindingi441 – 4411Copper 4By similarity

    GO - Molecular functioni

    1. copper ion binding Source: InterPro
    2. hydroquinone:oxygen oxidoreductase activity Source: UniProtKB-EC

    GO - Biological processi

    1. lignin catabolic process Source: UniProtKB-KW

    Keywords - Molecular functioni

    Oxidoreductase

    Keywords - Biological processi

    Lignin degradation

    Keywords - Ligandi

    Copper, Metal-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Putative laccase-16 (EC:1.10.3.2)
    Alternative name(s):
    Benzenediol:oxygen oxidoreductase 16
    Diphenol oxidase 16
    Urishiol oxidase 16
    Gene namesi
    Name:LAC16
    Ordered Locus Names:Os10g0437400, LOC_Os10g30140
    OrganismiOryza sativa subsp. japonica (Rice)
    Taxonomic identifieri39947 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
    ProteomesiUP000000763: Chromosome 10

    Organism-specific databases

    GrameneiQ7XE50.

    Subcellular locationi

    GO - Cellular componenti

    1. apoplast Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Apoplast, Secreted

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 467467Putative laccase-16PRO_0000291900Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi39947.LOC_Os10g30140.1.

    Structurei

    3D structure databases

    ProteinModelPortaliQ7XE50.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini7 – 8882Plastocyanin-like 1Add
    BLAST
    Domaini98 – 225128Plastocyanin-like 2Add
    BLAST
    Domaini318 – 451134Plastocyanin-like 3Add
    BLAST

    Sequence similaritiesi

    Belongs to the multicopper oxidase family.Curated
    Contains 3 plastocyanin-like domains.Curated

    Keywords - Domaini

    Repeat

    Phylogenomic databases

    eggNOGiCOG2132.
    HOGENOMiHOG000241916.

    Family and domain databases

    Gene3Di2.60.40.420. 3 hits.
    InterProiIPR001117. Cu-oxidase.
    IPR011706. Cu-oxidase_2.
    IPR011707. Cu-oxidase_3.
    IPR002355. Cu_oxidase_Cu_BS.
    IPR008972. Cupredoxin.
    [Graphical view]
    PfamiPF00394. Cu-oxidase. 1 hit.
    PF07731. Cu-oxidase_2. 1 hit.
    PF07732. Cu-oxidase_3. 1 hit.
    [Graphical view]
    SUPFAMiSSF49503. SSF49503. 4 hits.
    PROSITEiPS00079. MULTICOPPER_OXIDASE1. 1 hit.
    PS00080. MULTICOPPER_OXIDASE2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q7XE50-1 [UniParc]FASTAAdd to Basket

    « Hide

    MDRKGIVLGS KLAVFSMILL WHRHGVDQPR NPWSDGPEFI TQCPIRPCGN    50
    FTYQVILFEE EGTLWWHAHS DFDRATVHGA IVIHPKHGTT FPFNKPDKEI 100
    PIILSEWWND DVENVLDEAK RTGGDQGNTY LLRVINTGLT NDMFFAVAGH 150
    CLTVVSIDAR YTKPLTVDYI MIAPGQTMDV LLEANRTLGS NSRYYMAARA 200
    FITLPVDTIP FNNSTATAIV EYTDSPTARP PGPPEFPLLL PAIKDEDAAM 250
    AFVDERMLID IDVNFLPCDT TNATNKLCKG PQGNQFAASL NNVSFESPAI 300
    DVLDAYYYGS GRGVYEEDFP NKPVNAFVNP TGDNGGRPLL TKRGTKVKVV 350
    EYGTVVEVVF QDLSSENHPM HLHGFAFYVV GRGSGTFDER RDPATYNLVD 400
    PPFQNTVSVP KSSWAAIRFR ADNPGVWFMH CHFDRHVVWG MDTVFIVKDG 450
    KTPQAQMLPR PPNMPEC 467
    Length:467
    Mass (Da):52,187
    Last modified:October 1, 2003 - v1
    Checksum:i93F9411A5D6E1C21
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    DP000086 Genomic DNA. Translation: AAP53940.1.
    AP008216 Genomic DNA. No translation available.

    Genome annotation databases

    EnsemblPlantsiOS10T0437400-00; OS10T0437400-00; OS10G0437400.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    DP000086 Genomic DNA. Translation: AAP53940.1 .
    AP008216 Genomic DNA. No translation available.

    3D structure databases

    ProteinModelPortali Q7XE50.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 39947.LOC_Os10g30140.1.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi OS10T0437400-00 ; OS10T0437400-00 ; OS10G0437400 .

    Organism-specific databases

    Gramenei Q7XE50.

    Phylogenomic databases

    eggNOGi COG2132.
    HOGENOMi HOG000241916.

    Family and domain databases

    Gene3Di 2.60.40.420. 3 hits.
    InterProi IPR001117. Cu-oxidase.
    IPR011706. Cu-oxidase_2.
    IPR011707. Cu-oxidase_3.
    IPR002355. Cu_oxidase_Cu_BS.
    IPR008972. Cupredoxin.
    [Graphical view ]
    Pfami PF00394. Cu-oxidase. 1 hit.
    PF07731. Cu-oxidase_2. 1 hit.
    PF07732. Cu-oxidase_3. 1 hit.
    [Graphical view ]
    SUPFAMi SSF49503. SSF49503. 4 hits.
    PROSITEi PS00079. MULTICOPPER_OXIDASE1. 1 hit.
    PS00080. MULTICOPPER_OXIDASE2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "In-depth view of structure, activity, and evolution of rice chromosome 10."
      Yu Y., Rambo T., Currie J., Saski C., Kim H.-R., Collura K., Thompson S., Simmons J., Yang T.-J., Nah G., Patel A.J., Thurmond S., Henry D., Oates R., Palmer M., Pries G., Gibson J., Anderson H.
      , Paradkar M., Crane L., Dale J., Carver M.B., Wood T., Frisch D., Engler F., Soderlund C., Palmer L.E., Teytelman L., Nascimento L., De la Bastide M., Spiegel L., Ware D., O'Shaughnessy A., Dike S., Dedhia N., Preston R., Huang E., Ferraro K., Kuit K., Miller B., Zutavern T., Katzenberger F., Muller S., Balija V., Martienssen R.A., Stein L., Minx P., Johnson D., Cordum H., Mardis E., Cheng Z., Jiang J., Wilson R., McCombie W.R., Wing R.A., Yuan Q., Ouyang S., Liu J., Jones K.M., Gansberger K., Moffat K., Hill J., Tsitrin T., Overton L., Bera J., Kim M., Jin S., Tallon L., Ciecko A., Pai G., Van Aken S., Utterback T., Reidmuller S., Bormann J., Feldblyum T., Hsiao J., Zismann V., Blunt S., de Vazeille A.R., Shaffer T., Koo H., Suh B., Yang Q., Haas B., Peterson J., Pertea M., Volfovsky N., Wortman J., White O., Salzberg S.L., Fraser C.M., Buell C.R., Messing J., Song R., Fuks G., Llaca V., Kovchak S., Young S., Bowers J.E., Paterson A.H., Johns M.A., Mao L., Pan H., Dean R.A.
      Science 300:1566-1569(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    3. "The rice annotation project database (RAP-DB): 2008 update."
      The rice annotation project (RAP)
      Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENOME REANNOTATION.
      Strain: cv. Nipponbare.

    Entry informationi

    Entry nameiLAC16_ORYSJ
    AccessioniPrimary (citable) accession number: Q7XE50
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: June 26, 2007
    Last sequence update: October 1, 2003
    Last modified: October 1, 2014
    This is version 68 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Caution

    Lacks the signal peptide, which is one of the conserved features of the laccases.Curated
    Could be the product of a pseudogene.Curated

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Oryza sativa (rice)
      Index of Oryza sativa entries and their corresponding gene designations
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3