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Q7XE50

- LAC16_ORYSJ

UniProt

Q7XE50 - LAC16_ORYSJ

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Protein

Putative laccase-16

Gene

LAC16

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 3 out of 5- Protein uncertaini

Functioni

Lignin degradation and detoxification of lignin-derived products.By similarity

Catalytic activityi

4 benzenediol + O2 = 4 benzosemiquinone + 2 H2O.

Cofactori

Binds 4 copper ions per monomer.By similarity

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi22 – 221Copper 1By similarity
Metal bindingi24 – 241Copper 2By similarity
Metal bindingi67 – 671Copper 2By similarity
Metal bindingi69 – 691Copper 3By similarity
Metal bindingi368 – 3681Copper 4By similarity
Metal bindingi371 – 3711Copper 1By similarity
Metal bindingi373 – 3731Copper 3By similarity
Metal bindingi430 – 4301Copper 3By similarity
Metal bindingi431 – 4311Copper 4By similarity
Metal bindingi432 – 4321Copper 2By similarity
Metal bindingi436 – 4361Copper 4By similarity
Metal bindingi441 – 4411Copper 4By similarity

GO - Molecular functioni

  1. copper ion binding Source: InterPro
  2. hydroquinone:oxygen oxidoreductase activity Source: UniProtKB-EC

GO - Biological processi

  1. lignin catabolic process Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Oxidoreductase

Keywords - Biological processi

Lignin degradation

Keywords - Ligandi

Copper, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Putative laccase-16 (EC:1.10.3.2)
Alternative name(s):
Benzenediol:oxygen oxidoreductase 16
Diphenol oxidase 16
Urishiol oxidase 16
Gene namesi
Name:LAC16
Ordered Locus Names:Os10g0437400, LOC_Os10g30140
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 10

Organism-specific databases

GrameneiQ7XE50.

Subcellular locationi

GO - Cellular componenti

  1. apoplast Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Apoplast, Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 467467Putative laccase-16PRO_0000291900Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os10g30140.1.

Structurei

3D structure databases

ProteinModelPortaliQ7XE50.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini7 – 8882Plastocyanin-like 1Add
BLAST
Domaini98 – 225128Plastocyanin-like 2Add
BLAST
Domaini318 – 451134Plastocyanin-like 3Add
BLAST

Sequence similaritiesi

Belongs to the multicopper oxidase family.Curated
Contains 3 plastocyanin-like domains.Curated

Keywords - Domaini

Repeat

Phylogenomic databases

eggNOGiCOG2132.
HOGENOMiHOG000241916.
InParanoidiQ7XE50.

Family and domain databases

Gene3Di2.60.40.420. 3 hits.
InterProiIPR001117. Cu-oxidase.
IPR011706. Cu-oxidase_2.
IPR011707. Cu-oxidase_3.
IPR002355. Cu_oxidase_Cu_BS.
IPR008972. Cupredoxin.
[Graphical view]
PfamiPF00394. Cu-oxidase. 1 hit.
PF07731. Cu-oxidase_2. 1 hit.
PF07732. Cu-oxidase_3. 1 hit.
[Graphical view]
SUPFAMiSSF49503. SSF49503. 4 hits.
PROSITEiPS00079. MULTICOPPER_OXIDASE1. 1 hit.
PS00080. MULTICOPPER_OXIDASE2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q7XE50-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MDRKGIVLGS KLAVFSMILL WHRHGVDQPR NPWSDGPEFI TQCPIRPCGN
60 70 80 90 100
FTYQVILFEE EGTLWWHAHS DFDRATVHGA IVIHPKHGTT FPFNKPDKEI
110 120 130 140 150
PIILSEWWND DVENVLDEAK RTGGDQGNTY LLRVINTGLT NDMFFAVAGH
160 170 180 190 200
CLTVVSIDAR YTKPLTVDYI MIAPGQTMDV LLEANRTLGS NSRYYMAARA
210 220 230 240 250
FITLPVDTIP FNNSTATAIV EYTDSPTARP PGPPEFPLLL PAIKDEDAAM
260 270 280 290 300
AFVDERMLID IDVNFLPCDT TNATNKLCKG PQGNQFAASL NNVSFESPAI
310 320 330 340 350
DVLDAYYYGS GRGVYEEDFP NKPVNAFVNP TGDNGGRPLL TKRGTKVKVV
360 370 380 390 400
EYGTVVEVVF QDLSSENHPM HLHGFAFYVV GRGSGTFDER RDPATYNLVD
410 420 430 440 450
PPFQNTVSVP KSSWAAIRFR ADNPGVWFMH CHFDRHVVWG MDTVFIVKDG
460
KTPQAQMLPR PPNMPEC
Length:467
Mass (Da):52,187
Last modified:October 1, 2003 - v1
Checksum:i93F9411A5D6E1C21
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
DP000086 Genomic DNA. Translation: AAP53940.1.
AP008216 Genomic DNA. No translation available.

Genome annotation databases

EnsemblPlantsiOS10T0437400-00; OS10T0437400-00; OS10G0437400.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
DP000086 Genomic DNA. Translation: AAP53940.1 .
AP008216 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortali Q7XE50.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 39947.LOC_Os10g30140.1.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi OS10T0437400-00 ; OS10T0437400-00 ; OS10G0437400 .

Organism-specific databases

Gramenei Q7XE50.

Phylogenomic databases

eggNOGi COG2132.
HOGENOMi HOG000241916.
InParanoidi Q7XE50.

Family and domain databases

Gene3Di 2.60.40.420. 3 hits.
InterProi IPR001117. Cu-oxidase.
IPR011706. Cu-oxidase_2.
IPR011707. Cu-oxidase_3.
IPR002355. Cu_oxidase_Cu_BS.
IPR008972. Cupredoxin.
[Graphical view ]
Pfami PF00394. Cu-oxidase. 1 hit.
PF07731. Cu-oxidase_2. 1 hit.
PF07732. Cu-oxidase_3. 1 hit.
[Graphical view ]
SUPFAMi SSF49503. SSF49503. 4 hits.
PROSITEi PS00079. MULTICOPPER_OXIDASE1. 1 hit.
PS00080. MULTICOPPER_OXIDASE2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "In-depth view of structure, activity, and evolution of rice chromosome 10."
    Yu Y., Rambo T., Currie J., Saski C., Kim H.-R., Collura K., Thompson S., Simmons J., Yang T.-J., Nah G., Patel A.J., Thurmond S., Henry D., Oates R., Palmer M., Pries G., Gibson J., Anderson H.
    , Paradkar M., Crane L., Dale J., Carver M.B., Wood T., Frisch D., Engler F., Soderlund C., Palmer L.E., Teytelman L., Nascimento L., De la Bastide M., Spiegel L., Ware D., O'Shaughnessy A., Dike S., Dedhia N., Preston R., Huang E., Ferraro K., Kuit K., Miller B., Zutavern T., Katzenberger F., Muller S., Balija V., Martienssen R.A., Stein L., Minx P., Johnson D., Cordum H., Mardis E., Cheng Z., Jiang J., Wilson R., McCombie W.R., Wing R.A., Yuan Q., Ouyang S., Liu J., Jones K.M., Gansberger K., Moffat K., Hill J., Tsitrin T., Overton L., Bera J., Kim M., Jin S., Tallon L., Ciecko A., Pai G., Van Aken S., Utterback T., Reidmuller S., Bormann J., Feldblyum T., Hsiao J., Zismann V., Blunt S., de Vazeille A.R., Shaffer T., Koo H., Suh B., Yang Q., Haas B., Peterson J., Pertea M., Volfovsky N., Wortman J., White O., Salzberg S.L., Fraser C.M., Buell C.R., Messing J., Song R., Fuks G., Llaca V., Kovchak S., Young S., Bowers J.E., Paterson A.H., Johns M.A., Mao L., Pan H., Dean R.A.
    Science 300:1566-1569(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  3. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.

Entry informationi

Entry nameiLAC16_ORYSJ
AccessioniPrimary (citable) accession number: Q7XE50
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 26, 2007
Last sequence update: October 1, 2003
Last modified: October 29, 2014
This is version 69 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Caution

Lacks the signal peptide, which is one of the conserved features of the laccases.Curated
Could be the product of a pseudogene.Curated

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3