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Protein

60S ribosomal protein L27

Gene

LOC_Os10g41470

Organism
Oryza sativa subsp. japonica (Rice)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal proteinUniRule annotationImported

Enzyme and pathway databases

ReactomeiR-OSA-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-OSA-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-OSA-72689. Formation of a pool of free 40S subunits.
R-OSA-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-OSA-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-OSA-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L27UniRule annotation
Gene namesi
Ordered Locus Names:LOC_Os10g41470Imported, Os10g0564300Imported
ORF Names:OsJ_32486Imported, OSJNBa0027P10.10Imported, OSNPB_100564300Imported
OrganismiOryza sativa subsp. japonica (Rice)Imported
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryza
Proteomesi
  • UP000059680 Componenti: Chromosome 10

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os10g41470.1.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini4 – 3128KOWInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the ribosomal protein L27e family.UniRule annotation

Phylogenomic databases

eggNOGiKOG3418. Eukaryota.
COG2163. LUCA.
OMAiVKFEERQ.
OrthoDBiEOG09360SMO.

Family and domain databases

Gene3Di2.30.30.30. 1 hit.
InterProiIPR005824. KOW.
IPR014722. Rib_L2_dom2.
IPR001141. Ribosomal_L27e.
IPR018262. Ribosomal_L27e_CS.
IPR008991. Translation_prot_SH3-like.
[Graphical view]
PANTHERiPTHR10497. PTHR10497. 1 hit.
PfamiPF00467. KOW. 1 hit.
PF01777. Ribosomal_L27e. 1 hit.
[Graphical view]
ProDomiPD009396. Ribosomal_L27e. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SMARTiSM00739. KOW. 1 hit.
[Graphical view]
SUPFAMiSSF50104. SSF50104. 1 hit.
PROSITEiPS01107. RIBOSOMAL_L27E. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q7XC31-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVKFLKPGKA VILLQGRFAG RKAVIVRVFE EGTRDRPYGH CLVAGLAKYP
60 70 80 90 100
KKVIRKDSAK KTAKKSRVKC FLKLVNFTHL MPTRYTLDVD LKEVAAGPDA
110 120 130
LATRDKKVAA CKSAKARLED RFKTGKNRWF FTKLRF
Length:136
Mass (Da):15,472
Last modified:October 1, 2003 - v1
Checksum:iA6B90FC13AE7E1DC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC084763 Genomic DNA. Translation: AAG60203.1.
DP000086 Genomic DNA. Translation: AAP55044.1.
AP008216 Genomic DNA. Translation: BAF27247.1.
AK066340 mRNA. Translation: BAG89924.1.
AP014966 Genomic DNA. Translation: BAT12093.1.
CM000147 Genomic DNA. Translation: EAZ17001.1.
RefSeqiXP_015612809.1. XM_015757323.1.
UniGeneiOs.12785.

Genome annotation databases

EnsemblPlantsiOS10T0564300-01; OS10T0564300-01; OS10G0564300.
GeneIDi4349409.
GrameneiOS10T0564300-01; OS10T0564300-01; OS10G0564300.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC084763 Genomic DNA. Translation: AAG60203.1.
DP000086 Genomic DNA. Translation: AAP55044.1.
AP008216 Genomic DNA. Translation: BAF27247.1.
AK066340 mRNA. Translation: BAG89924.1.
AP014966 Genomic DNA. Translation: BAT12093.1.
CM000147 Genomic DNA. Translation: EAZ17001.1.
RefSeqiXP_015612809.1. XM_015757323.1.
UniGeneiOs.12785.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi39947.LOC_Os10g41470.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiOS10T0564300-01; OS10T0564300-01; OS10G0564300.
GeneIDi4349409.
GrameneiOS10T0564300-01; OS10T0564300-01; OS10G0564300.

Phylogenomic databases

eggNOGiKOG3418. Eukaryota.
COG2163. LUCA.
OMAiVKFEERQ.
OrthoDBiEOG09360SMO.

Enzyme and pathway databases

ReactomeiR-OSA-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-OSA-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-OSA-72689. Formation of a pool of free 40S subunits.
R-OSA-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-OSA-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-OSA-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Family and domain databases

Gene3Di2.30.30.30. 1 hit.
InterProiIPR005824. KOW.
IPR014722. Rib_L2_dom2.
IPR001141. Ribosomal_L27e.
IPR018262. Ribosomal_L27e_CS.
IPR008991. Translation_prot_SH3-like.
[Graphical view]
PANTHERiPTHR10497. PTHR10497. 1 hit.
PfamiPF00467. KOW. 1 hit.
PF01777. Ribosomal_L27e. 1 hit.
[Graphical view]
ProDomiPD009396. Ribosomal_L27e. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SMARTiSM00739. KOW. 1 hit.
[Graphical view]
SUPFAMiSSF50104. SSF50104. 1 hit.
PROSITEiPS01107. RIBOSOMAL_L27E. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ7XC31_ORYSJ
AccessioniPrimary (citable) accession number: Q7XC31
Secondary accession number(s): Q9AY43
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2003
Last sequence update: October 1, 2003
Last modified: September 7, 2016
This is version 112 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.