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Protein

60S ribosomal protein L27

Gene

LOC_Os10g41470

Organism
Oryza sativa subsp. japonica (Rice)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal proteinUniRule annotationImported

Enzyme and pathway databases

ReactomeiR-OSA-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-OSA-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-OSA-72689. Formation of a pool of free 40S subunits.
R-OSA-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-OSA-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-OSA-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L27UniRule annotation
Gene namesi
Ordered Locus Names:LOC_Os10g41470Imported, Os10g0564300Imported
ORF Names:OsJ_32486Imported, OSJNBa0027P10.10Imported, OSNPB_100564300Imported
OrganismiOryza sativa subsp. japonica (Rice)Imported
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryzaOryza sativa
Proteomesi
  • UP000059680 Componenti: Chromosome 10

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os10g41470.1.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini4 – 31KOWInterPro annotationAdd BLAST28

Sequence similaritiesi

Belongs to the eukaryotic ribosomal protein eL27 family.UniRule annotation

Phylogenomic databases

eggNOGiKOG3418. Eukaryota.
COG2163. LUCA.
KOiK02901.
OMAiFVKYINV.
OrthoDBiEOG09360SMO.

Family and domain databases

Gene3Di2.30.30.30. 1 hit.
InterProiView protein in InterPro
IPR005824. KOW.
IPR014722. Rib_L2_dom2.
IPR001141. Ribosomal_L27e.
IPR018262. Ribosomal_L27e_CS.
IPR008991. Translation_prot_SH3-like_sf.
PANTHERiPTHR10497. PTHR10497. 1 hit.
PfamiView protein in Pfam
PF00467. KOW. 1 hit.
PF01777. Ribosomal_L27e. 1 hit.
ProDomiView protein in ProDom or Entries sharing at least one domain
PD009396. Ribosomal_L27e. 1 hit.
SMARTiView protein in SMART
SM00739. KOW. 1 hit.
SUPFAMiSSF50104. SSF50104. 1 hit.
PROSITEiView protein in PROSITE
PS01107. RIBOSOMAL_L27E. 1 hit.

Sequencei

Sequence statusi: Complete.

Q7XC31-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVKFLKPGKA VILLQGRFAG RKAVIVRVFE EGTRDRPYGH CLVAGLAKYP
60 70 80 90 100
KKVIRKDSAK KTAKKSRVKC FLKLVNFTHL MPTRYTLDVD LKEVAAGPDA
110 120 130
LATRDKKVAA CKSAKARLED RFKTGKNRWF FTKLRF
Length:136
Mass (Da):15,472
Last modified:October 1, 2003 - v1
Checksum:iA6B90FC13AE7E1DC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC084763 Genomic DNA. Translation: AAG60203.1.
DP000086 Genomic DNA. Translation: AAP55044.1.
AP008216 Genomic DNA. Translation: BAF27247.1.
AK066340 mRNA. Translation: BAG89924.1.
AP014966 Genomic DNA. Translation: BAT12093.1.
CM000147 Genomic DNA. Translation: EAZ17001.1.
RefSeqiXP_015612809.1. XM_015757323.1.
UniGeneiOs.12785.

Genome annotation databases

EnsemblPlantsiOS10T0564300-01; OS10T0564300-01; OS10G0564300.
GeneIDi4349409.
GrameneiOS10T0564300-01; OS10T0564300-01; OS10G0564300.
KEGGiosa:4349409.

Similar proteinsi

Entry informationi

Entry nameiQ7XC31_ORYSJ
AccessioniPrimary (citable) accession number: Q7XC31
Secondary accession number(s): Q9AY43
Entry historyiIntegrated into UniProtKB/TrEMBL: October 1, 2003
Last sequence update: October 1, 2003
Last modified: November 22, 2017
This is version 120 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported