Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

60S ribosomal protein L27

Gene

Os10g0564300

Organism
Oryza sativa subsp. japonica (Rice)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal proteinUniRule annotationImported

Enzyme and pathway databases

ReactomeiR-OSA-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-OSA-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-OSA-72689. Formation of a pool of free 40S subunits.
R-OSA-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-OSA-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-OSA-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L27UniRule annotation
Gene namesi
Name:Os10g0564300Imported
Ordered Locus Names:LOC_Os10g41470Imported, Os10g0564300Imported
ORF Names:OsJ_32486Imported, OSJNBa0027P10.10Imported, OSNPB_100564300Imported
OrganismiOryza sativa subsp. japonica (Rice)Imported
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryza
Proteomesi
  • UP000059680 Componenti: Chromosome 10

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os10g41470.1.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini4 – 31KOWInterPro annotationAdd BLAST28

Sequence similaritiesi

Belongs to the ribosomal protein L27e family.UniRule annotation

Phylogenomic databases

eggNOGiKOG3418. Eukaryota.
COG2163. LUCA.
KOiK02901.
OMAiVKFEERQ.
OrthoDBiEOG09360SMO.

Family and domain databases

Gene3Di2.30.30.30. 1 hit.
InterProiIPR005824. KOW.
IPR014722. Rib_L2_dom2.
IPR001141. Ribosomal_L27e.
IPR018262. Ribosomal_L27e_CS.
IPR008991. Translation_prot_SH3-like.
[Graphical view]
PANTHERiPTHR10497. PTHR10497. 1 hit.
PfamiPF00467. KOW. 1 hit.
PF01777. Ribosomal_L27e. 1 hit.
[Graphical view]
ProDomiPD009396. Ribosomal_L27e. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SMARTiSM00739. KOW. 1 hit.
[Graphical view]
SUPFAMiSSF50104. SSF50104. 1 hit.
PROSITEiPS01107. RIBOSOMAL_L27E. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q7XC31-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVKFLKPGKA VILLQGRFAG RKAVIVRVFE EGTRDRPYGH CLVAGLAKYP
60 70 80 90 100
KKVIRKDSAK KTAKKSRVKC FLKLVNFTHL MPTRYTLDVD LKEVAAGPDA
110 120 130
LATRDKKVAA CKSAKARLED RFKTGKNRWF FTKLRF
Length:136
Mass (Da):15,472
Last modified:October 1, 2003 - v1
Checksum:iA6B90FC13AE7E1DC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC084763 Genomic DNA. Translation: AAG60203.1.
DP000086 Genomic DNA. Translation: AAP55044.1.
AP008216 Genomic DNA. Translation: BAF27247.1.
AK066340 mRNA. Translation: BAG89924.1.
AP014966 Genomic DNA. Translation: BAT12093.1.
CM000147 Genomic DNA. Translation: EAZ17001.1.
RefSeqiXP_015612809.1. XM_015757323.1.
UniGeneiOs.12785.

Genome annotation databases

EnsemblPlantsiOS10T0564300-01; OS10T0564300-01; OS10G0564300.
GeneIDi4349409.
GrameneiOS10T0564300-01; OS10T0564300-01; OS10G0564300.
KEGGiosa:4349409.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC084763 Genomic DNA. Translation: AAG60203.1.
DP000086 Genomic DNA. Translation: AAP55044.1.
AP008216 Genomic DNA. Translation: BAF27247.1.
AK066340 mRNA. Translation: BAG89924.1.
AP014966 Genomic DNA. Translation: BAT12093.1.
CM000147 Genomic DNA. Translation: EAZ17001.1.
RefSeqiXP_015612809.1. XM_015757323.1.
UniGeneiOs.12785.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi39947.LOC_Os10g41470.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiOS10T0564300-01; OS10T0564300-01; OS10G0564300.
GeneIDi4349409.
GrameneiOS10T0564300-01; OS10T0564300-01; OS10G0564300.
KEGGiosa:4349409.

Phylogenomic databases

eggNOGiKOG3418. Eukaryota.
COG2163. LUCA.
KOiK02901.
OMAiVKFEERQ.
OrthoDBiEOG09360SMO.

Enzyme and pathway databases

ReactomeiR-OSA-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-OSA-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-OSA-72689. Formation of a pool of free 40S subunits.
R-OSA-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-OSA-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-OSA-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Family and domain databases

Gene3Di2.30.30.30. 1 hit.
InterProiIPR005824. KOW.
IPR014722. Rib_L2_dom2.
IPR001141. Ribosomal_L27e.
IPR018262. Ribosomal_L27e_CS.
IPR008991. Translation_prot_SH3-like.
[Graphical view]
PANTHERiPTHR10497. PTHR10497. 1 hit.
PfamiPF00467. KOW. 1 hit.
PF01777. Ribosomal_L27e. 1 hit.
[Graphical view]
ProDomiPD009396. Ribosomal_L27e. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SMARTiSM00739. KOW. 1 hit.
[Graphical view]
SUPFAMiSSF50104. SSF50104. 1 hit.
PROSITEiPS01107. RIBOSOMAL_L27E. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ7XC31_ORYSJ
AccessioniPrimary (citable) accession number: Q7XC31
Secondary accession number(s): Q9AY43
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2003
Last sequence update: October 1, 2003
Last modified: November 2, 2016
This is version 114 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.