Q7X9N2 (Q7X9N2_ARATH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
MADS-box protein AGL53 EMBL AAN52781.1

Submitted name:
Protein agamous-like 53 EMBL AED93646.1

Gene names

Name:	AGL53 EMBL AED93646.1
Ordered Locus Names:	At5g27070 TAIR At5g27070
ORF Names:	AT5G27070 EMBL AED93646.1

Organism

Arabidopsis thaliana (Mouse-ear cress) EMBL AAN52781.1

Taxonomic identifier

3702 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length	287 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Subcellular location	Nucleus By similarity RuleBase RU000476.
Sequence similarities	Contains 1 MADS-box domain. SAAS SAAS002100 RuleBase RU000476

Ontologies

Keywords
Biological process	Transcription Transcription regulation SAAS SAAS002100 RuleBase RU000476
Cellular component	Nucleus SAAS SAAS002100 RuleBase RU000476
Ligand	DNA-binding SAAS SAAS002100 RuleBase RU000476
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	nucleus Inferred from electronic annotation. Source: UniProtKB-SubCell plasma membrane Inferred from direct assay. Source: TAIR
Molecular function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW protein dimerization activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q7X9N2 [UniParc]. Last modified October 1, 2003. Version 1. Checksum: 2494E62537A884E2	FASTA	287	32,684
	10 20 30 40 50 60 MDSSMSTKKK TKLSVRNQTC FKKSSLSSSS TAKKTTNLSM REQTMFKKAL ELSTLCNIDV 70 80 90 100 110 120 CVIYYGRDGK LIKTWPEDQS KVRDMAERFS RLHERERCKK RTNLSLFLRK KILDDTKLSE 130 140 150 160 170 180 KVLEMEDSLE SGLRVLQDKL LLLQPEKNQT EFGQTRAVSS TTNPLSPPPS LIEDHRHQQW 190 200 210 220 230 240 TEPLMSGVSN TEQDLSTSSL SQNQSRISVF LYNHDNRSFY QVPDSVSSFD QSALLGEQGS 250 260 270 280 GLGSNFDLPP MVFPPQMQTQ TPLVPFDQFA AWNQAPSFAD PMMFPYN

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Molecular and phylogenetic analyses of the complete MADS-box transcription factor family in Arabidopsis: new openings to the MADS world." Parenicova L., de Folter S., Kieffer M., Horner D.S., Favalli C., Busscher J., Cook H.E., Ingram R.M., Kater M.M., Davies B., Angenent G.C., Colombo L. Plant Cell 15:1538-1551(2003) [PubMed: 12837945] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Tissue: Inflorescence EMBL AAN52781.1.
[2]	"Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana." Kazusa DNA Research Institute, Cold Spring Harbor and Washington University in St Louis Sequencing Consortium, European Union Arabidopsis Genome Sequencing Consortium Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E., Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K. , Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L., O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D., Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M., Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L., Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B., Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P., Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M., Dedhia N., Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D., Baker J., Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A., Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I., Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T., Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.-A., McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U., Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W., Mooijman P., Klein Lankhorst R., Weitzenegger T., Bothe G., Rose M., Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S., Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G., Mayer K.F.X., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.-W., Bevan M., Fransz P.F. Nature 408:823-826(2000) [PubMed: 11130714] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Columbia.
[3]	Folter S.de., Busscher-Lange J., Angenent G. Submitted (AUG-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Tissue: Inflorescence EMBL AAN52781.1.
[4]	The Arabidopsis Information Resource (TAIR) Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Columbia.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AY141217 mRNA. Translation: AAN52781.1. CP002688 Genomic DNA. Translation: AED93646.1.
IPI	IPI00829355.
RefSeq	NP_198059.1. NM_122589.1.
UniGene	At.30836.
3D structure databases
ProteinModelPortal	Q7X9N2.
ModBase	Search...
Protein-protein interaction databases
IntAct	Q7X9N2. 14 interactions.
STRING	Q7X9N2.
Proteomic databases
PRIDE	Q7X9N2.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	AT5G27070.1; AT5G27070.1; AT5G27070.
GeneID	832765.
GenomeReviews	Gene locus AT5G27070 in contig BA000015_GR.
KEGG	ath:AT5G27070.
NMPDR	fig|3702.1.peg.24910.
Organism-specific databases
TAIR	At5g27070.
Phylogenomic databases
eggNOG	KOG0014.
HOGENOM	HBG316663.
PhylomeDB	Q7X9N2.
ProtClustDB	CLSN2686952.
Gene expression databases
Genevestigator	Q7X9N2.
Family and domain databases
InterPro	IPR002100. TF_MADSbox. [Graphical view]
Pfam	PF00319. SRF-TF. 1 hit. [Graphical view]
SMART	SM00432. MADS. 1 hit. [Graphical view]
SUPFAM	SSF55455. TF_MADSbox. 1 hit.
PROSITE	PS50066. MADS_BOX_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q7X9N2_ARATH

Accession

Primary (citable) accession number: Q7X9N2

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2003
Last sequence update:	October 1, 2003
Last modified:	January 25, 2012
This is version 61 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)