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Protein
Submitted name:

Ribosomal protein L3

Gene

RPL3

Organism
Triticum aestivum (Wheat)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal proteinUniRule annotationImported

Names & Taxonomyi

Protein namesi
Submitted name:
Ribosomal protein L3Imported
Submitted name:
Ribosomal protein L3-A1Imported
Submitted name:
Ribosomal protein L3A-1Imported
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:RPL3Imported
Synonyms:RPL3-A1Imported, RPL3A-1Imported
OrganismiTriticum aestivum (Wheat)Imported
Taxonomic identifieri4565 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladePooideaeTriticeaeTriticum
ProteomesiUP000019116 Componenti: Unassembled WGS sequence

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4V3Pelectron microscopy34.00LC1-389[»]
4V7Eelectron microscopy5.50CB1-389[»]
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L3P family.UniRule annotation

Phylogenomic databases

OMAiMAYYPRK.

Family and domain databases

InterProiIPR000597. Ribosomal_L3.
IPR019926. Ribosomal_L3_CS.
IPR009000. Transl_B-barrel.
[Graphical view]
PfamiPF00297. Ribosomal_L3. 1 hit.
[Graphical view]
SUPFAMiSSF50447. SSF50447. 1 hit.
PROSITEiPS00474. RIBOSOMAL_L3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q7X744-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSHRKFEHPR HGSLGFLPRK RCSRHRGKVK SFPKDDQQKP CHLTAFLGYK
60 70 80 90 100
AGMTHIVREV EKPGSKLHKK ETCEAVTIIE TPPLVIVGLV AYVKTPRGLR
110 120 130 140 150
TLNSVWAQHL SEDVRRRFYK NWCKSKKKAF TKYALKYDSD AGKKEIQLQL
160 170 180 190 200
EKMKKYATIV RVIAHTQIRK MKGLKQKKAH LMEIQVNGGT IADKVDYGYK
210 220 230 240 250
FFEKEVPVEA VFQKDEMVDI IGVTKGKGYE GVVTRWGVTR LPRKTHRGLR
260 270 280 290 300
KVACIGAWHP ARVSYTVARA GQNGYHHRTE MNKKIYKMGK SGQESHEACT
310 320 330 340 350
EFDRTEKDIT PMGGFPHYGV VKGDYLMIKG CCVGPKKRVV TLRQSLLKQT
360 370 380
SRLALEEIKL KFIDTSSKFG HGRFQTTDEK QKFYGRLKA
Length:389
Mass (Da):44,622
Last modified:October 1, 2003 - v1
Checksum:i9DF7E489688BDA3A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY343327 mRNA. Translation: AAQ21396.1.
AY343330 mRNA. Translation: AAQ21399.1.
AY347536 Genomic DNA. Translation: AAQ62079.1.
DQ915518 Genomic DNA. Translation: ABK63947.1.
BK001238 mRNA. Translation: DAA01149.1.

Genome annotation databases

EnsemblPlantsiTraes_5DL_191C18950.2; Traes_5DL_191C18950.2; Traes_5DL_191C18950.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY343327 mRNA. Translation: AAQ21396.1.
AY343330 mRNA. Translation: AAQ21399.1.
AY347536 Genomic DNA. Translation: AAQ62079.1.
DQ915518 Genomic DNA. Translation: ABK63947.1.
BK001238 mRNA. Translation: DAA01149.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4V3Pelectron microscopy34.00LC1-389[»]
4V7Eelectron microscopy5.50CB1-389[»]
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiTraes_5DL_191C18950.2; Traes_5DL_191C18950.2; Traes_5DL_191C18950.

Phylogenomic databases

OMAiMAYYPRK.

Family and domain databases

InterProiIPR000597. Ribosomal_L3.
IPR019926. Ribosomal_L3_CS.
IPR009000. Transl_B-barrel.
[Graphical view]
PfamiPF00297. Ribosomal_L3. 1 hit.
[Graphical view]
SUPFAMiSSF50447. SSF50447. 1 hit.
PROSITEiPS00474. RIBOSOMAL_L3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Characterization of the ribosomal protein L3 (RPL3) gene family of wheat and rice."
    Busch B.L., Abolmaali S., Lucyshyn D., Mitterbauer R., Mousavi A., Adam G.
    Submitted (MAR-2003) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  2. "Genomic DNA sequence of Triticum aestivum ribosomal protein L3 A1 homolog."
    Sanjarian F., Mousavi A., Busch B., Lucyshyn D., Adam G.
    Submitted (JUL-2003) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  3. "Sequence of Wheat Ribosomal Protein L3 A1 Homolog."
    Sanjarian F., Mousavi A., Busch B., Lucyshyn D., Abolmaali S., Adam G.
    Submitted (JUL-2003) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  4. "Cloning and characterization of the ribosomal protein L3 (RPL3) gene family from Triticum aestivum."
    Lucyshyn D., Busch B.L., Abolmaali S., Steiner B., Chandler E., Sanjarian F., Mousavi A., Nicholson P., Buerstmayr H., Adam G.
    Mol. Genet. Genomics 277:507-517(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
  5. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: cv. Chinese SpringImported.
  6. "The molecular structure of the left-handed supra-molecular helix of eukaryotic polyribosomes."
    Myasnikov A.G., Afonina Z.A., Menetret J.F., Shirokov V.A., Spirin A.S., Klaholz B.P.
    Nat. Commun. 5:5294-5294(2014) [PubMed] [Europe PMC] [Abstract]
    Cited for: STRUCTURE BY ELECTRON MICROSCOPY (34.00 ANGSTROMS).
  7. "Structures of the Sec61 complex engaged in nascent peptide translocation or membrane insertion."
    Gogala M., Becker T., Beatrix B., Armache J.P., Barrio-Garcia C., Berninghausen O., Beckmann R.
    Nature 506:107-110(2014) [PubMed] [Europe PMC] [Abstract]
    Cited for: STRUCTURE BY ELECTRON MICROSCOPY (5.50 ANGSTROMS).
  8. EnsemblPlants
    Submitted (FEB-2015) to UniProtKB
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiQ7X744_WHEAT
AccessioniPrimary (citable) accession number: Q7X744
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2003
Last sequence update: October 1, 2003
Last modified: June 24, 2015
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.