Q7WYN3 (Q7WYN3_9FIRM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Cellulosomal scaffoldin adaptor protein B EMBL AAP48995.1

Gene names

Name:

scaB EMBL AAP48995.1

Organism

Acetivibrio cellulolyticus EMBL AAP48995.1

Taxonomic identifier

35830 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Ruminococcaceae › Acetivibrio

Protein attributes

Sequence length	942 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Technical term	3D-structure PDB 3FNK PDB 3GHP PDB 3BWZ PDB 1ZV9 PDB 3F2L PDB 3L8Q PDB 1QZN
Gene Ontology (GO)
Biological process	polysaccharide catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	carbohydrate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q7WYN3 [UniParc]. Last modified October 1, 2003. Version 1. Checksum: CABB5A638B352CA9	FASTA	942	100,359
	10 20 30 40 50 60 MKVNRILSFL LTLMLVIYSL CGNLINAAPT SSIEIVLDKT TASVGEIVTA SINIKNITNF 70 80 90 100 110 120 SGCQLNMKYD PAVLQPVTSS GVAYTKSTMP GAGTILNSDF NLRQVADNDL EKGILNFSKA 130 140 150 160 170 180 YVSLDDYRTA AAPEQTGTVA VVKFKVLKEE TSSISFEDTT SVPNAIDGTV LFDWNGDRIQ 190 200 210 220 230 240 SGYSVIQPAV INLDMIKASY ITMGYDKNAA EVGEIIKATV KINKITNFSG YQVNIKYDPT 250 260 270 280 290 300 VLQAVNPKTG VAYTNSSLPT SGELLVSEDY GPIVQGVHKI SEGILNLSRS YTALEVYRAS 310 320 330 340 350 360 ESPEETGTLA VVGFKVLQKK ATTVVFEDSE TMPNGITGTT LFNWYGNRIQ SGYFVIQPGE 370 380 390 400 410 420 INSAPIATAT PTTKPTAFAS TMPTVTLTPT PTATTTTTIP TAVPTTESYI TMNFDKNTAE 430 440 450 460 470 480 VGQIIKATVK INKITNFSGY QVNIKYDPTV LQAVNPKTGV AYTNSSLPTS GELLVNEDYG 490 500 510 520 530 540 PIVQGVHKIS EGILNLSRSY TALDVYRASE SPEETGTVAV VGFKALQKKA TTVVFEHSVT 550 560 570 580 590 600 MPNGIIGTTL FNWYGNRITS GYSVIQPGEI NSETITTPTP TATPTIIVTP TPTATATPTI 610 620 630 640 650 660 VVTPTVKPTP TSTGDSYITI DLDKTDVSVG DIIKASVRIN DISNFSGYQV NIKYDTTVLQ 670 680 690 700 710 720 AVNPKTGAEY KNDSLPLEGE ILANQDYSPF PTCDNIISEG LLNFGKLYTA LDVYKESNLA 730 740 750 760 770 780 EKSGVVAVVG FKVIKAKNTA ITFEDCDSMP SGITGTMLFN WDGEIIKSGY SIMQPAAITV 790 800 810 820 830 840 RSVTPTATAT PTATPTKTAT PTPTQTATPT PTQTATPTAT QTATATATAT ATATPTATAT 850 860 870 880 890 900 ATPTATATPT ATATTTPTTT PTTTPTPKFI YGDVDGNGSV RINDAVLIRD YVLGKINEFP 910 920 930 940 YEYGMLAADV DGNGSIKIND AVLVRDYVLG KIFLFPVEEK EE

References

[1]	"The cellulosome system of Acetivibrio cellulolyticus includes a novel type of adaptor protein and a cell surface anchoring protein." Xu Q., Gao W., Ding S.Y., Kenig R., Shoham Y., Bayer E.A., Lamed R. J. Bacteriol. 185:4548-4557(2003) [PubMed: 12867464] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[2]	"Two genes of an Acetivibrio cellulolyticus cellulosome-integrating gene cluster encode for unique types of anchoring proteins." Xu Q., Bayer E.A., Kenig R., Shoham Y., Lamed R. Submitted (JAN-2003) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[3]	"Intermodular linker flexibility revealed from crystal structures of adjacent cellulosomal cohesins of Acetivibrio cellulolyticus." Noach I., Frolow F., Alber O., Lamed R., Shimon L.J., Bayer E.A. J. Mol. Biol. 391:86-97(2009) [PubMed: 19501595] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (1.20 ANGSTROMS) OF 28-199.
[4]	"Crystal structure analysis of the K171A mutation of N-terminal type II cohesin 1 from the cellulosomal ScaB subunit of Acetivibrio cellulolyticus." Frolow F., Freeman A., Wine Y., Eppel A., Shanzer M., Stempler S. Submitted (OCT-2008) to the PDB data bank Cited for: X-RAY CRYSTALLOGRAPHY (1.85 ANGSTROMS) OF 28-199.
[5]	"Modular arrangement of a cellulosomal scaffoldin subunit revealed from the crystal structure of a cohesin dyad." Noach I., Levy-Assaraf M., Lamed R., Shimon L.J., Frolow F., Bayer E.A. J. Mol. Biol. 399:294-305(2010) [PubMed: 20394754] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (1.57 ANGSTROMS) OF 28-368.
[6]	"Crystal structure of a type-II cohesin module from the Bacteroides cellulosolvens cellulosome reveals novel and distinctive secondary structural elements." Noach I., Frolow F., Jakoby H., Rosenheck S., Shimon L.W., Lamed R., Bayer E.A. J. Mol. Biol. 348:1-12(2005) [PubMed: 15808849] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (1.90 ANGSTROMS) OF 27-199.
+	Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

AY221112 Genomic DNA. Translation: AAP48995.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
1QZN	X-ray	1.90	A	27-199	[»]
1ZV9	X-ray	1.28	A	28-199	[»]
3BWZ	X-ray	1.20	A	28-199	[»]
3F2L	X-ray	1.85	A	28-199	[»]
3FNK	X-ray	1.99	A/B/C	190-368	[»]
3GHP	X-ray	2.49	A/B	190-408	[»]
3L8Q	X-ray	1.57	A/B/C/D	28-368	[»]

ProteinModelPortal

Q7WYN3.

SMR

Q7WYN3. Positions 28-199.

ModBase

Search...

Protocols and materials databases

StructuralBiologyKnowledgebase

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Family and domain databases

InterPro

IPR008965. Carb-bd_dom.
IPR016134. Cellulos_enz_dockerin_1.
IPR002102. Cohesin_dom.
IPR018452. Cohesin_dom_subgr.
[Graphical view]

Gene3D

G3DSA:1.10.1330.10. Cellulos_enz_dockerin_1. 1 hit.
G3DSA:2.60.40.680. Cohesin. 4 hits.

Pfam

PF00963. Cohesin. 4 hits.
[Graphical view]

SUPFAM

SSF49384. Cellul_bind. 4 hits.
SSF63446. Cellulos_enz_dockerin_1. 1 hit.

ProtoNet

Search...

Entry information

Entry name

Q7WYN3_9FIRM

Accession

Primary (citable) accession number: Q7WYN3

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2003
Last sequence update:	October 1, 2003
Last modified:	January 25, 2012
This is version 39 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)