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Protein

Superoxide dismutase

Gene

sodB

Organism
Aeromonas salmonicida subsp. salmonicida
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

GO - Molecular functioni

  1. metal ion binding Source: InterPro
  2. superoxide dismutase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotationImported

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Name:sodBImported
OrganismiAeromonas salmonicida subsp. salmonicidaImported
Taxonomic identifieri29491 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAeromonadalesAeromonadaceaeAeromonas

Structurei

3D structure databases

ProteinModelPortaliQ7WYN0.
SMRiQ7WYN0. Positions 2-192.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Phylogenomic databases

KOiK04564.
OrthoDBiEOG63NMNT.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q7WYN0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAFELPALPY AINALEPHIS QETLEYHHGK HHNTYVVNLN NLVPGTEFEG
60 70 80 90 100
KSLEEIIKTS TGGIFNNAAQ IWNHTFYWHC LSPNGGNEPT GALADAINKA
110 120 130 140 150
FGSFAEFKDA FTKSAIGNFG SSWTWLVKKA DGSLAIVNTS NAGCPLTEAG
160 170 180 190
TTPLLTVDLW EHAYYIDFRN LRPKYMETFW TLVNWEFVAK NLAA
Length:194
Mass (Da):21,584
Last modified:October 1, 2003 - v1
Checksum:i1D59B7F4AF063B3B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY321353 Genomic DNA. Translation: AAP85514.1.
RefSeqiYP_001141225.1. NC_009348.1.

Genome annotation databases

KEGGiasa:ASA_1375.
PATRICi20789132. VBIAerSal2987_1371.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY321353 Genomic DNA. Translation: AAP85514.1.
RefSeqiYP_001141225.1. NC_009348.1.

3D structure databases

ProteinModelPortaliQ7WYN0.
SMRiQ7WYN0. Positions 2-192.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

KEGGiasa:ASA_1375.
PATRICi20789132. VBIAerSal2987_1371.

Phylogenomic databases

KOiK04564.
OrthoDBiEOG63NMNT.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Molecular characterization and quantitative analysis of superoxide dismutases in virulent and avirulent strains of Aeromonas salmonicida subsp. salmonicida."
    Dacanay A., Johnson S.C., Bjornsdottir R., Ebanks R.O., Ross N.W., Reith M., Singh R.K., Hiu J., Brown L.L.
    J. Bacteriol. 185:4336-4344(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: A449Imported.
  2. "The Genome Sequence of Aeromonas salmonicida subsp. salmonicida strain A449."
    Singh R.K., Curtis B., Kozera C., Reith M., Han Y., Boyd J.M., Stone C., Welsh J., Munholland J., Murphy C., Dacanay A., Douglas S., Ebanks R.O., Ewart V.K., Johnson S.C., Ross N.W., Sensen C., Tsoi S., Brown L.L.
    Submitted (JUN-2003) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: A449Imported.

Entry informationi

Entry nameiQ7WYN0_AERSA
AccessioniPrimary (citable) accession number: Q7WYN0
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2003
Last sequence update: October 1, 2003
Last modified: April 29, 2015
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.