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Q7WTN6 (Q7WTN6_RHOMR) Unreviewed, UniProtKB/TrEMBL

Last modified December 11, 2013. Version 60. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length997 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Metal binding2191Calcium 1; via carbonyl oxygen PDB 3JXS PDB 2Y64 PDB 2Y6G PDB 2Y6H PDB 2Y6J PDB 2Y6K PDB 2Y6L
Metal binding2211Calcium 1 PDB 3JXS PDB 2Y64 PDB 2Y6G PDB 2Y6H PDB 2Y6K PDB 2Y6L
Metal binding2321Calcium 2; via carbonyl oxygen PDB 3JXS PDB 2Y64 PDB 2Y6H PDB 2Y6K PDB 2Y6L
Metal binding2381Calcium 2; via carbonyl oxygen PDB 3JXS PDB 2Y64 PDB 2Y6H PDB 2Y6K PDB 2Y6L
Metal binding2391Calcium 2 PDB 3JXS PDB 2Y64 PDB 2Y6H PDB 2Y6K PDB 2Y6L
Metal binding2621Calcium 1 PDB 3JXS PDB 2Y64 PDB 2Y6G PDB 2Y6H PDB 2Y6J PDB 2Y6K PDB 2Y6L
Metal binding2651Calcium 1; via carbonyl oxygen PDB 3JXS PDB 2Y64 PDB 2Y6G PDB 2Y6H PDB 2Y6J PDB 2Y6K PDB 2Y6L
Metal binding3701Calcium 1 PDB 3JXS PDB 2Y64 PDB 2Y6G PDB 2Y6H PDB 2Y6J PDB 2Y6K PDB 2Y6L
Binding site3591Citrate PDB 2Y6K

Sequences

Sequence LengthMass (Da)Tools
Q7WTN6 [UniParc].

Last modified October 1, 2003. Version 1.
Checksum: CE6ABF99CC4AC1A9

FASTA997110,343
        10         20         30         40         50         60 
MRTATDLRFL RNAVGNASRS AIFLFLVFSL VGQAWGQTPA NVNGSFESTP AGVVTDLAGG 

        70         80         90        100        110        120 
VEGWVLNVGS LVTNPPVFEV VEATDAPHGS KVLAVTVNGA GNNPWDIEAT AFPVNVEPGV 

       130        140        150        160        170        180 
TYTYTIWARA EQDGAVVSFT VGNQSYQEYG RLHEQQITTE WQPYTFEFTV SDQETVIRAP 

       190        200        210        220        230        240 
IHFGYAANAG NTIYIDALVI MGPEPEPAGP ELVANINGGF ESTPAGVVTD LAEGVEGWDL 

       250        260        270        280        290        300 
NVGSSVTNPP VFEVLETSDA PEGNKVLAVT VNGVGNNPWD IEATAFPVNV RPGVTYTYTI 

       310        320        330        340        350        360 
WARAEQDGAV VSFTVGNQSF QEYGRLHEQQ ITTEWQPFTF EFTVSDQETV IRAPIHFGYA 

       370        380        390        400        410        420 
ANVGNTIYID GLAIVDSVGA WRPVIVEAED GELGSEWAVE TEGNVTYITI TTDYNETTGD 

       430        440        450        460        470        480 
ADHPGENRTA TYQVTFPAPG WYDLYARVYV GPETFNDDSF FYADSFGVKD PESPDDWIIA 

       490        500        510        520        530        540 
NQLRAAGYTE PDEYVTGLGA AGSEVWKWIN LSENSFNDVP SDSFYVSPES LTVTFMIGAR 

       550        560        570        580        590        600 
ENGLRIDKLA FGRSDLLYTV ADLDTGGPGS PEPEEPPVVL PERPLAADVD KFLGNIYSPS 

       610        620        630        640        650        660 
QVENFEYYWN CVTPENAGKW GSVEGTRDQM NWSSLDAAYA LARDNGFCFN FHVLLWGAQQ 

       670        680        690        700        710        720 
PAWISELSPE EQLEEIQEWF QAVAERYSFT ASPFDVVQVV NEPLHQPPDG QEGRANYIEA 

       730        740        750        760        770        780 
LGGAGETGWD WVITAFELAR QIFPEGTRLM INDYGILSSL ETAQQYLELI QLLKERNLID 

       790        800        810        820        830        840 
VIGVQGHAFS TRSGAPIQEV LDLLATTGLP IQVTEMDIDG NPNQSPFVTR EQSEQNQLRD 

       850        860        870        880        890        900 
MQRIFPTVWY HPAVEGVTFW GWRPGLWRND YEAYLVYSNG AERPAMVWLR EFMEAYRESY 

       910        920        930        940        950        960 
LSANEPEGTL PEELSVVSWP NPSRGQVRFR YALPFEAEVR LQVFDVLGRE VMTLASGRHR 

       970        980        990 
AGVYEVAFDG RHLPSGLYLY RLEANGRVRS GRLVLMR 

« Hide

References

[1]"Cloning and sequence of a thermostable multidomain xylanase from the bacterium Rhodothermus marinus."
Nordberg Karlsson E., Bartonek-Roxa E., Holst O.
Biochim. Biophys. Acta 1353:118-124(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[2]Nordberg Karlsson E.M.
Submitted (MAR-2003) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[3]"The crystal structure of XG-34, an evolved xyloglucan-specific carbohydrate-binding module."
Gullfot F., Tan T.C., von Schantz L., Karlsson E.N., Ohlin M., Brumer H., Divne C.
Proteins 78:785-789(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (1.60 ANGSTROMS) OF 212-376 IN COMPLEX WITH CALCIUM.
[4]"Structural basis for carbohydrate-binding specificity--a comparative assessment of two engineered carbohydrate-binding modules."
von Schantz L., Hakansson M., Logan D.T., Walse B., Osterlin J., Nordberg-Karlsson E., Ohlin M.
Glycobiology 22:948-961(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (1.08 ANGSTROMS) OF 212-376 IN COMPLEX WITH CALCIUM AND CITRATE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
Y11564 Genomic DNA. Translation: CAA72323.2.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
2Y64X-ray1.40A212-376[»]
2Y6GX-ray1.30A212-376[»]
2Y6HX-ray1.08A212-376[»]
2Y6JX-ray1.70A212-376[»]
2Y6KX-ray1.36A212-376[»]
2Y6LX-ray1.28A212-376[»]
3JXSX-ray1.60A/B/C212-376[»]
ProteinModelPortalQ7WTN6.
SMRQ7WTN6. Positions 40-200, 212-374.
ModBaseSearch...
MobiDBSearch...

Protein family/group databases

CAZyCBM4. Carbohydrate-Binding Module Family 4.
GH10. Glycoside Hydrolase Family 10.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

Gene3D2.60.120.260. 2 hits.
3.20.20.80. 1 hit.
InterProIPR003305. CenC_carb-bd.
IPR008979. Galactose-bd-like.
IPR001000. Glyco_hydro_10.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR026444. Secre_tail.
[Graphical view]
PfamPF02018. CBM_4_9. 2 hits.
PF00331. Glyco_hydro_10. 1 hit.
[Graphical view]
SMARTSM00633. Glyco_10. 1 hit.
[Graphical view]
SUPFAMSSF49785. SSF49785. 2 hits.
SSF51445. SSF51445. 1 hit.
TIGRFAMsTIGR04183. Por_Secre_tail. 1 hit.
ProtoNetSearch...

Other

EvolutionaryTraceQ7WTN6.

Entry information

Entry nameQ7WTN6_RHOMR
AccessionPrimary (citable) accession number: Q7WTN6
Entry history
Integrated into UniProtKB/TrEMBL: October 1, 2003
Last sequence update: October 1, 2003
Last modified: December 11, 2013
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)