Reviewed,
UniProtKB/Swiss-Prot Q7WNY2 (PTH_BORBR)
Last modified
November 3, 2009.
Version 34.
History...
Clusters with 100%,
90%,
50% identity |
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Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents
Names and origin
| Protein names | Recommended name: Peptidyl-tRNA hydrolase Short name=PTH EC=3.1.1.29 | ||||
| Gene names |
| ||||
| Organism | Bordetella bronchiseptica (Alcaligenes bronchisepticus) [Complete proteome] [HAMAP] | ||||
| Taxonomic identifier | 518 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Alcaligenaceae › Bordetella |
Protein attributes
| Sequence length | 215 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Inferred from homology. |
General annotation (Comments)
| Function | The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis By similarity. |
| Catalytic activity | N-substituted aminoacyl-tRNA + H2O = N-substituted amino acid + tRNA. HAMAP MF_00083 |
| Subunit structure | Monomer By similarity. |
| Subcellular location | Cytoplasm By similarity. |
| Sequence similarities | Belongs to the PTH family. |
Ontologies
| Keywords | |
|---|---|
| Cellular component | Cytoplasm |
| Molecular function | Hydrolase |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | translation Inferred from electronic annotation. Source: HAMAP |
| Cellular component | cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular function | aminoacyl-tRNA hydrolase activity Inferred from electronic annotation. Source: HAMAP |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||
Molecule processing | |||||||
|---|---|---|---|---|---|---|---|
| Chain | 1 – 215 | 215 | Peptidyl-tRNA hydrolase HAMAP MF_00083 | PRO_0000187698 | |||
Sequences
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References
| [1] | "Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica." Parkhill J., Sebaihia M., Preston A., Murphy L.D., Thomson N.R., Harris D.E., Holden M.T.G., Churcher C.M., Bentley S.D., Mungall K.L., Cerdeno-Tarraga A.-M., Temple L., James K.D., Harris B., Quail M.A., Achtman M., Atkin R., Baker S. Maskell D.J.Nat. Genet. 35:32-40(2003) [PubMed: 12910271] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: RB50 / ATCC BAA-588 / NCTC 13252. |
Cross-references
Sequence databases | |
|---|---|
| BX640439 Genomic DNA. Translation: CAE31402.1. | |
| RefSeq | NP_887452.1. |
3D structure databases | |
| ModBase | Search... |
Genome annotation databases | |
| GeneID | 2662730. |
| GenomeReviews | Gene locus BB0903 in contig BX470250_GR. |
| KEGG | bbr:BB0903. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| HOGENOM | Q7WNY2. |
| OMA | IKFKTGG. |
Enzyme and pathway databases | |
| BioCyc | BBRO257310:BB0903-MON. |
| BRENDA | 3.1.1.29. 413. |
Family and domain databases | |
| HAMAP | MF_00083. [Tree] |
| InterPro | IPR001328. Pept_tRNA_hydro. IPR018171. Pept_tRNA_hydro_CS. [Graphical view] |
| Gene3D | G3DSA:3.40.50.1470. Pept_tRNA_hydro. 1 hit. |
| PANTHER | PTHR17224. Pept_tRNA_hydro. 1 hit. |
| Pfam | PF01195. Pept_tRNA_hydro. 1 hit. [Graphical view] |
| ProDom | PD005324. PeptRNAhydrolase. 1 hit. [Graphical view] [Entries sharing at least one domain] |
| TIGRFAMs | TIGR00447. pth. 1 hit. |
| PROSITE | PS01195. PEPT_TRNA_HYDROL_1. 1 hit. PS01196. PEPT_TRNA_HYDROL_2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | PTH_BORBR | ||||||||
| Accession | Primary (citable) accession number: Q7WNY2 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes) | ||||||||

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