Q7WL69 (Q7WL69_BORBR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Aminobutyrate aminotransferase EMBL CAE32377.1

Gene names

Ordered Locus Names:

BB1880

Organism

Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50) (Alcaligenes bronchisepticus) [Complete proteome] [HAMAP]

Taxonomic identifier

257310 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Alcaligenaceae › Bordetella

Protein attributes

Sequence length	424 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. RuleBase RU003560

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU003560
Molecular function	Aminotransferase EMBL CAE32377.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	gamma-aminobutyric acid metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	4-aminobutyrate transaminase activity Inferred from electronic annotation. Source: InterPro pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q7WL69 [UniParc]. Last modified October 1, 2003. Version 1. Checksum: 0489C685CDA74AA9	FASTA	424	45,314
	10 20 30 40 50 60 MDNAELTRRK EAATPRGVGV MCNFYADRAE NAELWDTEGR RYIDFAGGIA VLNTGHRHPQ 70 80 90 100 110 120 LMQALQAQMS RFTHTAYQIV PYASYIQLAE RINQLAPGDF AKKTALFTTG AEAVENAVKI 130 140 150 160 170 180 ARAATGRPAV VAFGAAFHGR TLLGMALTGK VVPYKVGFGP FPADIYHVPY PNALHGVSTD 190 200 210 220 230 240 DALAALGTLF KTDVDPRRVA AIIIEPVQGE GGFNICPPAF MQALRALCDD HGILLIADEV 250 260 270 280 290 300 QTGFGRTGKL FAMEHYGVAA DLTAMAKSLA GGMPLSAVCG RAEVMDAPPP GGLGGTYAGN 310 320 330 340 350 360 PLAVAAALEV IRIIEAEDLL ARGTRLGHQL RDHLEAQRHD VPEIAEVRAL GAMVAVEFRQ 370 380 390 400 410 420 PGSDAPSPEF ARQVQARALE QGLLLLTCGS DGNVIRFLFP LTIPEAVMRE ALDILARTLR GQNA

References

[1]

"Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica." Parkhill J., Sebaihia M., Preston A., Murphy L.D., Thomson N.R., Harris D.E., Holden M.T.G., Churcher C.M., Bentley S.D., Mungall K.L., Cerdeno-Tarraga A.-M., Temple L., James K.D., Harris B., Quail M.A., Achtman M., Atkin R., Baker S. , Basham D., Bason N., Cherevach I., Chillingworth T., Collins M., Cronin A., Davis P., Doggett J., Feltwell T., Goble A., Hamlin N., Hauser H., Holroyd S., Jagels K., Leather S., Moule S., Norberczak H., O'Neil S., Ormond D., Price C., Rabbinowitsch E., Rutter S., Sanders M., Saunders D., Seeger K., Sharp S., Simmonds M., Skelton J., Squares R., Squares S., Stevens K., Unwin L., Whitehead S., Barrell B.G., Maskell D.J. Nat. Genet. 35:32-40(2003) [PubMed: 12910271] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-588 / NCTC 13252 / RB50.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BX640442 Genomic DNA. Translation: CAE32377.1.
RefSeq	NP_888425.1. NC_002927.3.
3D structure databases
HSSP	HSSP built from PDB template 1GBN based on UniProtKB P04181.
ProteinModelPortal	Q7WL69.
SMR	Q7WL69. Positions 2-420.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	2661498.
GenomeReviews	Gene locus BB1880 in contig BX470250_GR.
KEGG	bbr:BB1880.
PATRIC	21137054. VBIBorBro124907_1904.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG725944.
OMA	WDKEGRR.
PhylomeDB	Q7WL69.
ProtClustDB	CLSK920651.
Family and domain databases
InterPro	IPR004632. 4NH2But_aminotransferase_bac. IPR005814. Aminotrans_3. IPR015424. PyrdxlP-dep_Trfase_major_dom. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
Gene3D	G3DSA:3.40.640.10. PyrdxlP-dep_Trfase_major_sub1. 1 hit. G3DSA:3.90.1150.10. PyrdxlP-dep_Trfase_major_sub2. 2 hits.
KO	K07250.
PANTHER	PTHR11986. Aminotrans_3. 1 hit.
Pfam	PF00202. Aminotran_3. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR00700. GABAtrnsam. 1 hit.
PROSITE	PS00600. AA_TRANSFER_CLASS_3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q7WL69_BORBR

Accession

Primary (citable) accession number: Q7WL69

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2003
Last sequence update:	October 1, 2003
Last modified:	January 25, 2012
This is version 50 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)