Q7WJ42 (Q7WJ42_BORBR) Unreviewed, UniProtKB/TrEMBL
Last modified
May 1, 2013.
Version 65.
History...
Names·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
Names·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize orderNames and origin
| Protein names | Submitted name: Glutamate decarboxylase EMBL CAE33151.1 EC=4.1.1.15 EMBL CAE33151.1 | ||
| Gene names |
| ||
| Organism | Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50) (Alcaligenes bronchisepticus) [Complete proteome] [HAMAP] | ||
| Taxonomic identifier | 257310 [NCBI] | ||
| Taxonomic lineage | Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Alcaligenaceae › Bordetella › ![]() |
Protein attributes
| Sequence length | 457 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Cofactor | Pyridoxal phosphate By similarity. RuleBase RU000382 |
| Sequence similarities | Belongs to the group II decarboxylase family. RuleBase RU000382 |
Ontologies
| Keywords | |
|---|---|
| Ligand | Pyridoxal phosphate RuleBase RU000382 |
| Molecular function | Lyase RuleBase RU000382 EMBL CAE33151.1 |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological_process | glutamate metabolic process Inferred from electronic annotation. Source: InterPro |
| Molecular_function | glutamate decarboxylase activity Inferred from electronic annotation. Source: EC pyridoxal phosphate bindingInferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequences
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References
| [1] | "Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica." Parkhill J., Sebaihia M., Preston A., Murphy L.D., Thomson N.R., Harris D.E., Holden M.T.G., Churcher C.M., Bentley S.D., Mungall K.L., Cerdeno-Tarraga A.-M., Temple L., James K.D., Harris B., Quail M.A., Achtman M., Atkin R., Baker S. Maskell D.J.Nat. Genet. 35:32-40(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-588 / NCTC 13252 / RB50. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | BX640445 Genomic DNA. Translation: CAE33151.1. |
| RefSeq | NP_889195.1. NC_002927.3. |
3D structure databases | |
| HSSP | HSSP built from PDB template 1PMM based on UniProtKB P28302. |
| ProteinModelPortal | Q7WJ42. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | 257310.BB2658. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| EnsemblBacteria | CAE33151; CAE33151; BB2658. |
| GeneID | 2660173. |
| KEGG | bbr:BB2658. |
| PATRIC | 21138651. VBIBorBro124907_2694. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| HOGENOM | HOG000070228. |
| KO | K01580. |
| OMA | PMDKEHM. |
| ProtClustDB | CLSK921668. |
Enzyme and pathway databases | |
| BioCyc | BBRO257310:BB2658-MONOMER. |
Family and domain databases | |
| Gene3D | 3.40.640.10. 1 hit. |
| InterPro | IPR010107. Glutamate_decarboxylase. IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. [Graphical view] |
| PANTHER | PTHR11999:SF1. PTHR11999:SF1. 1 hit. |
| Pfam | PF00282. Pyridoxal_deC. 1 hit. [Graphical view] |
| SUPFAM | SSF53383. PyrdxlP-dep_Trfase_major. 1 hit. |
| TIGRFAMs | TIGR01788. Glu-decarb-GAD. 1 hit. |
| ProtoNet | Search... |
Entry information
| Entry name | Q7WJ42_BORBR | ||||||||
| Accession | Primary (citable) accession number: Q7WJ42 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

Clusters with
