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Q7WIK6 (Q7WIK6_BORBR) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 66. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:BB2845 EMBL CAE33337.1
OrganismBordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50) (Alcaligenes bronchisepticus) [Complete proteome] [HAMAP]
Taxonomic identifier257310 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesAlcaligenaceaeBordetella

Protein attributes

Sequence length820 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL CAE33337.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q7WIK6 [UniParc].

Last modified October 1, 2003. Version 1.
Checksum: 0C8F9F24C950D91F

FASTA82090,008
        10         20         30         40         50         60 
MTQPLRQYRE KRDFRATAEP AGAARRPRAA ARASEGLSFV IQRHQARRLH YDFRLEIDGV 

        70         80         90        100        110        120 
LVSWAVPKGP SRDPSVKRLA VHVEDHPLEY GGFSGDIPKG QYGAGHVDIW DSGVWIPRGD 

       130        140        150        160        170        180 
PRQGLRRGKL HFALRGRRLA GDWVLVRMSG EQDQWLLRKE DDEAAVPGDD AERAPATPPP 

       190        200        210        220        230        240 
APEHAPAATP RGRRAAMPHT LAPQLATLVD SPPHGPGWSY EVKYDGYRIL AACSAGGVRL 

       250        260        270        280        290        300 
VSRGNEDWQA RMAPLARALG ALKLGRGWLD GEVVVLDERG VADFQLLQNA LDGQAEGLVF 

       310        320        330        340        350        360 
VAFDLPFWNG EDLRALPLQA RQERLEDLLR EVPEDAPLML TQRLPVADDT EGKAAWNEAC 

       370        380        390        400        410        420 
RLSLEGLICK RLDAPYRSGR SQGWLKLKCR PRQEFVIGGY TEPAGARRHL GALLVGLRQG 

       430        440        450        460        470        480 
RQLRYAGRVG TGFGAATLRT LGQRLAALRQ DAKPFSGDVP RGRGDAAIHW VSPELVAEVN 

       490        500        510        520        530        540 
YAGITRDGLL RQASFAGLRA DKPASEVRGE VAARPPAAKA ATPSRRAGDG RAEVAGVRIS 

       550        560        570        580        590        600 
HPDRLAYREP DYTKLQLAEY YAAIGPHILP HLRQRRVALL RCPDGAGTTC FFQKHLSQSL 

       610        620        630        640        650        660 
PAGVRRDGGH LVIESLPGLI ALVQYGAIEF HTWGADTRHP DTPDRITLDL DPGPGVAWPA 

       670        680        690        700        710        720 
IVEGAQMARL LMQEVGLEPF LKTTGGKGLH LVAPLRPTQP WDTVKDFARA LARQLAVALP 

       730        740        750        760        770        780 
DRFTANMAKA RRERRIFVDY LRNGNGATAV AAFSARARDG APVSMPLSWD ALDAGDDLRG 

       790        800        810        820 
ARWNIANALE QARRKPDPWA DYAASRRTLG SRMQARLPRD 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BX640445 Genomic DNA. Translation: CAE33337.1.
RefSeqNP_889381.1. NC_002927.3.

3D structure databases

ProteinModelPortalQ7WIK6.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING257310.BB2845.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAE33337; CAE33337; BB2845.
GeneID2662930.
KEGGbbr:BB2845.
PATRIC21139031. VBIBorBro124907_2884.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000222509.
KOK01971.
OMAHPLDYAD.
OrthoDBEOG661H49.
ProtClustDBPRK05972.

Enzyme and pathway databases

BioCycBBRO257310:BB2845-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ7WIK6_BORBR
AccessionPrimary (citable) accession number: Q7WIK6
Entry history
Integrated into UniProtKB/TrEMBL: October 1, 2003
Last sequence update: October 1, 2003
Last modified: April 16, 2014
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)