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Q7WIK6

- Q7WIK6_BORBR

UniProt

Q7WIK6 - Q7WIK6_BORBR

Protein
Submitted name:

Putative ATP-dependent DNA-ligase

Gene

BB2845

Organism
Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50) (Alcaligenes bronchisepticus)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 69 (01 Oct 2014)
      Sequence version 1 (01 Oct 2003)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciBBRO257310:BB2845-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative ATP-dependent DNA-ligaseImported
    Gene namesi
    Ordered Locus Names:BB2845Imported
    OrganismiBordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50) (Alcaligenes bronchisepticus)Imported
    Taxonomic identifieri257310 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesAlcaligenaceaeBordetella
    ProteomesiUP000001027: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi257310.BB2845.

    Structurei

    3D structure databases

    ProteinModelPortaliQ7WIK6.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000222509.
    KOiK01971.
    OMAiNGLPDFQ.
    OrthoDBiEOG661H49.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q7WIK6-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTQPLRQYRE KRDFRATAEP AGAARRPRAA ARASEGLSFV IQRHQARRLH    50
    YDFRLEIDGV LVSWAVPKGP SRDPSVKRLA VHVEDHPLEY GGFSGDIPKG 100
    QYGAGHVDIW DSGVWIPRGD PRQGLRRGKL HFALRGRRLA GDWVLVRMSG 150
    EQDQWLLRKE DDEAAVPGDD AERAPATPPP APEHAPAATP RGRRAAMPHT 200
    LAPQLATLVD SPPHGPGWSY EVKYDGYRIL AACSAGGVRL VSRGNEDWQA 250
    RMAPLARALG ALKLGRGWLD GEVVVLDERG VADFQLLQNA LDGQAEGLVF 300
    VAFDLPFWNG EDLRALPLQA RQERLEDLLR EVPEDAPLML TQRLPVADDT 350
    EGKAAWNEAC RLSLEGLICK RLDAPYRSGR SQGWLKLKCR PRQEFVIGGY 400
    TEPAGARRHL GALLVGLRQG RQLRYAGRVG TGFGAATLRT LGQRLAALRQ 450
    DAKPFSGDVP RGRGDAAIHW VSPELVAEVN YAGITRDGLL RQASFAGLRA 500
    DKPASEVRGE VAARPPAAKA ATPSRRAGDG RAEVAGVRIS HPDRLAYREP 550
    DYTKLQLAEY YAAIGPHILP HLRQRRVALL RCPDGAGTTC FFQKHLSQSL 600
    PAGVRRDGGH LVIESLPGLI ALVQYGAIEF HTWGADTRHP DTPDRITLDL 650
    DPGPGVAWPA IVEGAQMARL LMQEVGLEPF LKTTGGKGLH LVAPLRPTQP 700
    WDTVKDFARA LARQLAVALP DRFTANMAKA RRERRIFVDY LRNGNGATAV 750
    AAFSARARDG APVSMPLSWD ALDAGDDLRG ARWNIANALE QARRKPDPWA 800
    DYAASRRTLG SRMQARLPRD 820
    Length:820
    Mass (Da):90,008
    Last modified:October 1, 2003 - v1
    Checksum:i0C8F9F24C950D91F
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BX640445 Genomic DNA. Translation: CAE33337.1.
    RefSeqiNP_889381.1. NC_002927.3.
    WP_010926656.1. NC_002927.3.

    Genome annotation databases

    EnsemblBacteriaiCAE33337; CAE33337; BB2845.
    GeneIDi2662930.
    KEGGibbr:BB2845.
    PATRICi21139031. VBIBorBro124907_2884.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BX640445 Genomic DNA. Translation: CAE33337.1 .
    RefSeqi NP_889381.1. NC_002927.3.
    WP_010926656.1. NC_002927.3.

    3D structure databases

    ProteinModelPortali Q7WIK6.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 257310.BB2845.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAE33337 ; CAE33337 ; BB2845 .
    GeneIDi 2662930.
    KEGGi bbr:BB2845.
    PATRICi 21139031. VBIBorBro124907_2884.

    Phylogenomic databases

    HOGENOMi HOG000222509.
    KOi K01971.
    OMAi NGLPDFQ.
    OrthoDBi EOG661H49.

    Enzyme and pathway databases

    BioCyci BBRO257310:BB2845-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica."
      Parkhill J., Sebaihia M., Preston A., Murphy L.D., Thomson N.R., Harris D.E., Holden M.T.G., Churcher C.M., Bentley S.D., Mungall K.L., Cerdeno-Tarraga A.-M., Temple L., James K.D., Harris B., Quail M.A., Achtman M., Atkin R., Baker S.
      , Basham D., Bason N., Cherevach I., Chillingworth T., Collins M., Cronin A., Davis P., Doggett J., Feltwell T., Goble A., Hamlin N., Hauser H., Holroyd S., Jagels K., Leather S., Moule S., Norberczak H., O'Neil S., Ormond D., Price C., Rabbinowitsch E., Rutter S., Sanders M., Saunders D., Seeger K., Sharp S., Simmonds M., Skelton J., Squares R., Squares S., Stevens K., Unwin L., Whitehead S., Barrell B.G., Maskell D.J.
      Nat. Genet. 35:32-40(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC BAA-588 / NCTC 13252 / RB50Imported.

    Entry informationi

    Entry nameiQ7WIK6_BORBR
    AccessioniPrimary (citable) accession number: Q7WIK6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 1, 2003
    Last sequence update: October 1, 2003
    Last modified: October 1, 2014
    This is version 69 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3