Reviewed, UniProtKB/Swiss-Prot Q7WE97 (SELD_BORBR)

Names and origin

Protein names

Recommended name:
    Selenide, water dikinase
    EC=2.7.9.3
Alternative name(s):
    Selenophosphate synthetase
    Selenium donor protein

Gene names

Name:	selD
Synonyms:	fdhB
Ordered Locus Names:	BB4738

Organism

Bordetella bronchiseptica (Alcaligenes bronchisepticus) [Complete proteome] [HAMAP]

Taxonomic identifier

518 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Alcaligenaceae › Bordetella

Protein attributes

Sequence length	344 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Function	Synthesizes selenophosphate from selenide and ATP By similarity.
Catalytic activity	ATP + selenide + H2O = AMP + selenophosphate + phosphate. HAMAP MF_00625
Cofactor	Magnesium By similarity.
Sequence similarities	Belongs to the selenophosphate synthetase 1 family. Class I subfamily.

Ontologies

Keywords
Ligand	ATP-binding Magnesium Nucleotide-binding Selenium
Molecular function	Kinase Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	ATP binding Inferred from electronic annotation. Source: HAMAP magnesium ion binding Inferred from electronic annotation. Source: HAMAP selenide, water dikinase activity Inferred from electronic annotation. Source: HAMAP selenium binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 344	344	Selenide, water dikinase HAMAP MF_00625		PRO_0000127616
Regions
	Nucleotide binding	229 – 235	7	ATP Potential
Sites
	Active site	16	1	Potential
	Site	19	1	Important for catalytic activity By similarity

Sequences

	Sequence		Length	Mass (Da)
	Q7WE97-1 [UniParc]. Last modified October 1, 2003. Version 1. Checksum: 08721468EFE34710	FASTA	344	36,113
	10 20 30 40 50 60 MNTPVRLTQY SHGAGCGCKI SPKVLEIILA GSGAQNLDPR LWVGNASRDD AAVYALDDQR 70 80 90 100 110 120 GVVSTTDFFM PIVDDPFDFG RIAATNAISD IYAMGGDPLL AIAILGWPVN VLPPEVAREV 130 140 150 160 170 180 VRGGRAACDE AGIALAGGHS IDAPEPIFGL AVTGVVDKAR LKRNDTATAG CRLYLTKPLG 190 200 210 220 230 240 IGILTTAEKK SRLRPEDVNL ARDWMCTLNK PGSRFGALAG VKAMTDVTGF GLLGHLVEMA 250 260 270 280 290 300 DGSGVSARIE YAKVPRLPGV EHYLAEGCVP GGTGRNFDSY GARIAPLPQD RVDLLCDPQT 310 320 330 340 SGGLLVAVEP AGEAEFLAAA GELGLRLEPI GELVAQRPYA VEVL

References

[1]

"Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica." Parkhill J., Sebaihia M., Preston A., Murphy L.D., Thomson N.R., Harris D.E., Holden M.T.G., Churcher C.M., Bentley S.D., Mungall K.L., Cerdeno-Tarraga A.-M., Temple L., James K.D., Harris B., Quail M.A., Achtman M., Atkin R., Baker S. , Basham D., Bason N., Cherevach I., Chillingworth T., Collins M., Cronin A., Davis P., Doggett J., Feltwell T., Goble A., Hamlin N., Hauser H., Holroyd S., Jagels K., Leather S., Moule S., Norberczak H., O'Neil S., Ormond D., Price C., Rabbinowitsch E., Rutter S., Sanders M., Saunders D., Seeger K., Sharp S., Simmonds M., Skelton J., Squares R., Squares S., Stevens K., Unwin L., Whitehead S., Barrell B.G., Maskell D.J. Nat. Genet. 35:32-40(2003) [PubMed: 12910271] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: RB50 / ATCC BAA-588 / NCTC 13252.

Cross-references

Sequence databases
EMBLGenBankDDBJ	BX640451 Genomic DNA. Translation: CAE35101.1.
RefSeq	NP_891271.1.
3D structure databases
ModBase	Search...
Genome annotation databases
GeneID	2663952.
GenomeReviews	Gene locus BB4738 in contig BX470250_GR.
KEGG	bbr:BB4738.
NMPDR	fig|257310.1.peg.4718.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	Q7WE97.
OMA	MMAIAIL.
Enzyme and pathway databases
BioCyc	BBRO257310:BB4738-MON.
BRENDA	2.7.9.3. 413.
Family and domain databases
HAMAP	MF_00625. [Tree]
InterPro	IPR000728. AIR_synth. IPR010918. AIR_synth_C. IPR004536. SelD. [Graphical view]
Pfam	PF00586. AIRS. 1 hit. PF02769. AIRS_C. 1 hit. [Graphical view]
PIRSF	PIRSF036407. Selenphspht_syn. 1 hit.
TIGRFAMs	TIGR00476. selD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

SELD_BORBR

Accession

Primary (citable) accession number: Q7WE97

Entry history

Integrated into UniProtKB/Swiss-Prot:	April 13, 2004
Last sequence update:	October 1, 2003
Last modified:	November 3, 2009
This is version 33 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)