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Protein
Submitted name:

Aromatic-amino-acid aminotransferase

Gene

tyrB

Organism
Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseUniRule annotationImported, Transferase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciBPAR257311:BPP2024-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Aromatic-amino-acid aminotransferaseImported (EC:2.6.1.57Imported)
Gene namesi
Name:tyrBImported
Ordered Locus Names:BPP2024Imported
OrganismiBordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253)Imported
Taxonomic identifieri257311 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesAlcaligenaceaeBordetella
Proteomesi
  • UP000001421 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliQ7W8V7.
SMRiQ7W8V7. Positions 4-399.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini31 – 393363Aminotran_1_2InterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000185898.
KOiK00832.
OMAiRVGACTI.
OrthoDBiEOG6C2WBK.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR000796. Asp_trans.
IPR004838. NHTrfase_class1_PyrdxlP-BS.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11879. PTHR11879. 1 hit.
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
PRINTSiPR00799. TRANSAMINASE.
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00105. AA_TRANSFER_CLASS_1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q7W8V7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSTLFASVEL APRDPILGLN EQYNADTRPG KVNLGVGVYY DDEGRIPLLQ
60 70 80 90 100
AVRKAEVARI EAAAARGYLP IEGIAGYNEG AQALLLGADS PLAAEGRVLT
110 120 130 140 150
AQALGGTGAL KIGADFLRQL LPQSKVLISD PSWENHRALF ERAGFPVETY
160 170 180 190 200
AYYDAATHGL NFEAMLAALQ AAPEQTIVVL HACCHNPTGV DPTPQQWEQI
210 220 230 240 250
AAVVKARNLV PFLDIAYQGF GEGLEQDAAV VRMFAALDLT MFISSSFSKS
260 270 280 290 300
FSLYGERVGA LTVVAGSKDE AARVLSQLKR VIRTNYSNPP THGGTVVSTV
310 320 330 340 350
LNTPELFALW ENELAGMRDR IRLMRKELVE KIKAQGVAQD FSFVLAQRGM
360 370 380 390 400
FSYSGLTAAQ VDRLREEHGI YAVSSGRICV AALNSRNIDA VAAGIAAVLK
Length:400
Mass (Da):43,065
Last modified:October 1, 2003 - v1
Checksum:iFDD9E16E01FB3AF0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX640429 Genomic DNA. Translation: CAE37324.1.
RefSeqiWP_010928325.1. NC_002928.3.

Genome annotation databases

EnsemblBacteriaiCAE37324; CAE37324; BPP2024.
KEGGibpa:BPP2024.
PATRICi21147867. VBIBorPar43418_2130.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX640429 Genomic DNA. Translation: CAE37324.1.
RefSeqiWP_010928325.1. NC_002928.3.

3D structure databases

ProteinModelPortaliQ7W8V7.
SMRiQ7W8V7. Positions 4-399.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAE37324; CAE37324; BPP2024.
KEGGibpa:BPP2024.
PATRICi21147867. VBIBorPar43418_2130.

Phylogenomic databases

HOGENOMiHOG000185898.
KOiK00832.
OMAiRVGACTI.
OrthoDBiEOG6C2WBK.

Enzyme and pathway databases

BioCyciBPAR257311:BPP2024-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR000796. Asp_trans.
IPR004838. NHTrfase_class1_PyrdxlP-BS.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11879. PTHR11879. 1 hit.
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
PRINTSiPR00799. TRANSAMINASE.
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00105. AA_TRANSFER_CLASS_1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica."
    Parkhill J., Sebaihia M., Preston A., Murphy L.D., Thomson N., Harris D.E., Holden M.T., Churcher C.M., Bentley S.D., Mungall K.L., Cerdeno-Tarraga A.M., Temple L., James K., Harris B., Quail M.A., Achtman M., Atkin R., Baker S.
    , Basham D., Bason N., Cherevach I., Chillingworth T., Collins M., Cronin A., Davis P., Doggett J., Feltwell T., Goble A., Hamlin N., Hauser H., Holroyd S., Jagels K., Leather S., Moule S., Norberczak H., O'Neil S., Ormond D., Price C., Rabbinowitsch E., Rutter S., Sanders M., Saunders D., Seeger K., Sharp S., Simmonds M., Skelton J., Squares R., Squares S., Stevens K., Unwin L., Whitehead S., Barrell B.G., Maskell D.J.
    Nat. Genet. 35:32-40(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 12822 / ATCC BAA-587 / NCTC 13253Imported.

Entry informationi

Entry nameiQ7W8V7_BORPA
AccessioniPrimary (citable) accession number: Q7W8V7
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2003
Last sequence update: October 1, 2003
Last modified: March 16, 2016
This is version 87 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.