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Protein
Submitted name:

Putative type III secretion protein

Gene

bscC

Organism
Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

TransportUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Putative type III secretion proteinImported
Gene namesi
Name:bscCImported
Ordered Locus Names:BPP2240Imported
OrganismiBordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253)Imported
Taxonomic identifieri257311 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesAlcaligenaceaeBordetella
Proteomesi
  • UP000001421 Componenti: Chromosome

Subcellular locationi

  • Cell outer membrane UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini178 – 297Secretin_NInterPro annotationAdd BLAST120

Sequence similaritiesi

Belongs to the GSP D family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000146226.
KOiK03219.
OMAiYLMARIS.

Family and domain databases

InterProiIPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR003522. T3SS_OM_pore_YscC.
[Graphical view]
PfamiPF00263. Secretin. 1 hit.
PF03958. Secretin_N. 1 hit.
[Graphical view]
PRINTSiPR01337. TYPE3OMGPROT.
TIGRFAMsiTIGR02516. type_III_yscC. 1 hit.

Sequencei

Sequence statusi: Complete.

Q7W899-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAIGRLGYLV RGAWAGGVML LAAGSAWAAP NWPLAPYSYY AQQQSLSDVL
60 70 80 90 100
REFAAGFSLA LQQGKGVQGV VNGRFNARTP TEFIERLSGI YGFNWFVHAG
110 120 130 140 150
TLYVSRTSDV VTRAVDAAGA SPSALRQALL QLGILDERFG WGELPAQGVA
160 170 180 190 200
MVSGPPAYVA LVEQAVAALP KGAGNQQVAV FRLKHASVSD RVIRYRDQQV
210 220 230 240 250
VTPGMATMLR QLILGAGPGN DAALAAVAAP LRENPPVFGD AAADGKAPLA
260 270 280 290 300
GAAQAAGRRL SEPSVQADTR LNALIVQDIP ERMPIYRALI EQLDVPSTLI
310 320 330 340 350
EIEAMIVDVN TDLVNELGVT WGAQIGTTSL GYGDLGLRPG NGLPVDGAAA
360 370 380 390 400
ELAPGTLGIS VSTRLAARLR ALESDGQANI LSQPSILTAD NLGAMIDLSD
410 420 430 440 450
TFYIRTLGER VATVTPVTVG TSLRVTPRYI AAKGGRQVEL AIDIEDGRVL
460 470 480 490 500
QEYPIDGLPR VRKSSISTLA VVGDEQTLLI GGYNNRRDEE QVEKVPLLGD
510 520 530 540 550
IPGLGFLFSS KSRAVQRRER LFLIRPRVVA IEGKPVFSPV AGTSQVFMST
560 570 580 590 600
GWGGHGSSLS IAPGEDGHTQ VRHDARAGRR VRLVPDALHV EYGEAGEASP
Length:600
Mass (Da):63,494
Last modified:October 1, 2003 - v1
Checksum:i7295317F8EFC1A87
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX640429 Genomic DNA. Translation: CAE37540.1.
RefSeqiWP_003809915.1. NC_002928.3.

Genome annotation databases

EnsemblBacteriaiCAE37540; CAE37540; BPP2240.
KEGGibpa:BPP2240.
PATRICi21148322. VBIBorPar43418_2355.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX640429 Genomic DNA. Translation: CAE37540.1.
RefSeqiWP_003809915.1. NC_002928.3.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAE37540; CAE37540; BPP2240.
KEGGibpa:BPP2240.
PATRICi21148322. VBIBorPar43418_2355.

Phylogenomic databases

HOGENOMiHOG000146226.
KOiK03219.
OMAiYLMARIS.

Family and domain databases

InterProiIPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR003522. T3SS_OM_pore_YscC.
[Graphical view]
PfamiPF00263. Secretin. 1 hit.
PF03958. Secretin_N. 1 hit.
[Graphical view]
PRINTSiPR01337. TYPE3OMGPROT.
TIGRFAMsiTIGR02516. type_III_yscC. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ7W899_BORPA
AccessioniPrimary (citable) accession number: Q7W899
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2003
Last sequence update: October 1, 2003
Last modified: November 2, 2016
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.