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Protein
Submitted name:

4-aminobutyrate aminotransferase

Gene

goaG

Organism
Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseImported, Transferase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciBPAR257311:BPP2357-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
4-aminobutyrate aminotransferaseImported (EC:2.6.1.19Imported)
Gene namesi
Name:goaGImported
Ordered Locus Names:BPP2357Imported
OrganismiBordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253)Imported
Taxonomic identifieri257311 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesAlcaligenaceaeBordetella
ProteomesiUP000001421 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliQ7W800.
SMRiQ7W800. Positions 14-432.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000020206.
KOiK00823.
OMAiNLCAEAN.
OrthoDBiEOG6QVRHN.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR00700. GABAtrnsam. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q7W800-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MHTAFHLPNE PEMKNRDLNT RRTLATPRGV GVMCDFYAVR AENSTLWDAE
60 70 80 90 100
GKEYIDFAGG IAVLNTGHRH PKVKAAIAAQ LDNFTHTAYQ IVPYEGYVSL
110 120 130 140 150
AERINAVAPI EGLKKTAFFT TGVEAVENAV KIARAYTGRS GVVAFSGAFH
160 170 180 190 200
GRTMMGMALT GKVAPYKLAF GPMPGDVFHV PFPNATQAIS VADSLKALDL
210 220 230 240 250
LFKVDIDPKR VAAIIIEPVQ GEGGFNVTPP ELMQALRKVC DEHGILLIAD
260 270 280 290 300
EVQTGFARTG KLFAMQHHSV QADLITMAKS LGGGMPISGV VGRAEVMDGP
310 320 330 340 350
AAGGLGGTYA GNPLAVAAAH AVLDVIAEEK LCERAAELGK RLMDRLEGLR
360 370 380 390 400
AKCPAIADVR GLGSMVALEL NDPATGKPDA EAVKRIQQQA IERGLILLSC
410 420 430
GVYGNVLRFL YPLTIPDDQF ARALDILAET IAA
Length:433
Mass (Da):46,167
Last modified:October 1, 2003 - v1
Checksum:iA9D3BBD984E10390
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX640430 Genomic DNA. Translation: CAE37654.1.

Genome annotation databases

EnsemblBacteriaiCAE37654; CAE37654; BPP2357.
KEGGibpa:BPP2357.
PATRICi21148577. VBIBorPar43418_2478.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX640430 Genomic DNA. Translation: CAE37654.1.

3D structure databases

ProteinModelPortaliQ7W800.
SMRiQ7W800. Positions 14-432.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAE37654; CAE37654; BPP2357.
KEGGibpa:BPP2357.
PATRICi21148577. VBIBorPar43418_2478.

Phylogenomic databases

HOGENOMiHOG000020206.
KOiK00823.
OMAiNLCAEAN.
OrthoDBiEOG6QVRHN.

Enzyme and pathway databases

BioCyciBPAR257311:BPP2357-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR00700. GABAtrnsam. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica."
    Parkhill J., Sebaihia M., Preston A., Murphy L.D., Thomson N., Harris D.E., Holden M.T., Churcher C.M., Bentley S.D., Mungall K.L., Cerdeno-Tarraga A.M., Temple L., James K., Harris B., Quail M.A., Achtman M., Atkin R., Baker S.
    , Basham D., Bason N., Cherevach I., Chillingworth T., Collins M., Cronin A., Davis P., Doggett J., Feltwell T., Goble A., Hamlin N., Hauser H., Holroyd S., Jagels K., Leather S., Moule S., Norberczak H., O'Neil S., Ormond D., Price C., Rabbinowitsch E., Rutter S., Sanders M., Saunders D., Seeger K., Sharp S., Simmonds M., Skelton J., Squares R., Squares S., Stevens K., Unwin L., Whitehead S., Barrell B.G., Maskell D.J.
    Nat. Genet. 35:32-40(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 12822 / ATCC BAA-587 / NCTC 13253Imported.

Entry informationi

Entry nameiQ7W800_BORPA
AccessioniPrimary (citable) accession number: Q7W800
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2003
Last sequence update: October 1, 2003
Last modified: July 22, 2015
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.