Unreviewed,
UniProtKB/TrEMBL Q7W7S9 (Q7W7S9_BORPA)
Last modified
March 2, 2010.
Version 40.
History...
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Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information
Names and origin
| Protein names | Submitted name: Aminobutyrate aminotransferase EMBL CAE37727.1 | ||
| Gene names |
| ||
| Organism | Bordetella parapertussis [Complete proteome] [HAMAP] | ||
| Taxonomic identifier | 519 [NCBI] | ||
| Taxonomic lineage | Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Alcaligenaceae › Bordetella |
Protein attributes
| Sequence length | 424 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology. |
General annotation (Comments)
| Sequence similarities | Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. |
Ontologies
| Keywords | |
|---|---|
| Ligand | Pyridoxal phosphate RuleBase RU003560V0 |
| Molecular function | Aminotransferase EMBL CAE37727.1 Transferase |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | gamma-aminobutyric acid metabolic process Inferred from electronic annotation. Source: InterPro |
| Molecular function | 4-aminobutyrate transaminase activity Inferred from electronic annotation. Source: InterPro pyridoxal phosphate bindingInferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequences
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References
| [1] | "Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica." Parkhill J., Sebaihia M., Preston A., Murphy L.D., Thomson N.R., Harris D.E., Holden M.T.G., Churcher C.M., Bentley S.D., Mungall K.L., Cerdeno-Tarraga A.-M., Temple L., James K.D., Harris B., Quail M.A., Achtman M., Atkin R., Baker S.  Maskell D.J.Nat. Genet. 35:32-40(2003) [PubMed: 12910271] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 12822 / ATCC BAA-587 / NCTC 13253. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | BX640430 Genomic DNA. Translation: CAE37727.1. |
| RefSeq | NP_884666.1. |
3D structure databases | |
| HSSP | HSSP built from PDB template 1GBN based on UniProtKB P04181. |
| SMR | Q7W7S9. Positions 2-420. |
| ModBase | Search... |
Genome annotation databases | |
| GeneID | 1667159. |
| GenomeReviews | Gene locus BPP2431 in contig BX470249_GR. |
| KEGG | bpa:BPP2431. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| HOGENOM | HBG725944. |
| OMA | TTIGNSA. |
| PhylomeDB | Q7W7S9. |
| ProtClustDB | CLSK920651. |
Enzyme and pathway databases | |
| BioCyc | BPAR257311:BPP2431-MONOMER. |
Family and domain databases | |
| InterPro | IPR004632. 4NH2But_aminotransferase_bac. IPR005814. Aminotrans_3. IPR015424. PyrdxlP-dep_Trfase_major_dom. IPR015421. PyrdxlP-dep_Trfase_major_sub1. [Graphical view] |
| Gene3D | G3DSA:3.40.640.10. PyrdxlP-dep_Trfase_major_sub1. 1 hit. |
| PANTHER | PTHR11986. Aminotrans_3. 1 hit. |
| Pfam | PF00202. Aminotran_3. 1 hit. [Graphical view] |
| SUPFAM | SSF53383. PyrdxlP-dep_Trfase_major. 1 hit. |
| TIGRFAMs | TIGR00700. GABAtrnsam. 1 hit. |
| PROSITE | PS00600. AA_TRANSFER_CLASS_3. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | Q7W7S9_BORPA | ||||||||
| Accession | Primary (citable) accession number: Q7W7S9 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||
