Q7W7S9 (Q7W7S9_BORPA) Unreviewed, UniProtKB/TrEMBL
Last modified
May 1, 2013.
Version 60.
History...
Names·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
Names·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize orderNames and origin
| Protein names | Submitted name: Aminobutyrate aminotransferase EMBL CAE37727.1 | ||
| Gene names |
| ||
| Organism | Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253) [Complete proteome] [HAMAP] | ||
| Taxonomic identifier | 257311 [NCBI] | ||
| Taxonomic lineage | Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Alcaligenaceae › Bordetella › ![]() |
Protein attributes
| Sequence length | 424 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Sequence similarities | Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. RuleBase RU003560 |
Ontologies
| Keywords | |
|---|---|
| Ligand | Pyridoxal phosphate RuleBase RU003560 |
| Molecular function | Aminotransferase EMBL CAE37727.1 Transferase |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological_process | gamma-aminobutyric acid metabolic process Inferred from electronic annotation. Source: InterPro |
| Molecular_function | 4-aminobutyrate transaminase activity Inferred from electronic annotation. Source: InterPro pyridoxal phosphate bindingInferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequences
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References
| [1] | "Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica." Parkhill J., Sebaihia M., Preston A., Murphy L.D., Thomson N.R., Harris D.E., Holden M.T.G., Churcher C.M., Bentley S.D., Mungall K.L., Cerdeno-Tarraga A.-M., Temple L., James K.D., Harris B., Quail M.A., Achtman M., Atkin R., Baker S. Maskell D.J.Nat. Genet. 35:32-40(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 12822 / ATCC BAA-587 / NCTC 13253. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | BX640430 Genomic DNA. Translation: CAE37727.1. |
| RefSeq | NP_884666.1. NC_002928.3. |
3D structure databases | |
| HSSP | HSSP built from PDB template 1GBN based on UniProtKB P04181. |
| ProteinModelPortal | Q7W7S9. |
| SMR | Q7W7S9. Positions 2-420. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | 257311.BPP2431. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| EnsemblBacteria | CAE37727; CAE37727; BPP2431. |
| GeneID | 1667159. |
| KEGG | bpa:BPP2431. |
| PATRIC | 21148737. VBIBorPar43418_2553. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| HOGENOM | HOG000020206. |
| KO | K07250. |
| OMA | VEFNDRT. |
| ProtClustDB | CLSK920651. |
Enzyme and pathway databases | |
| BioCyc | BPAR257311:BPP2431-MONOMER. |
Family and domain databases | |
| Gene3D | 3.40.640.10. 1 hit. 3.90.1150.10. 2 hits. |
| InterPro | IPR004632. 4NH2But_aminotransferase_bac. IPR005814. Aminotrans_3. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view] |
| PANTHER | PTHR11986. PTHR11986. 1 hit. |
| Pfam | PF00202. Aminotran_3. 1 hit. [Graphical view] |
| SUPFAM | SSF53383. PyrdxlP-dep_Trfase_major. 1 hit. |
| TIGRFAMs | TIGR00700. GABAtrnsam. 1 hit. |
| PROSITE | PS00600. AA_TRANSFER_CLASS_3. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | Q7W7S9_BORPA | ||||||||
| Accession | Primary (citable) accession number: Q7W7S9 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

Clusters with
