Q7W6L0 (Q7W6L0_BORPA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
C-terminal region of a probable alpha amylase EMBL CAE38189.1

Gene names

Ordered Locus Names:

BPP2896

Organism

Bordetella parapertussis [Complete proteome] [HAMAP]

Taxonomic identifier

519 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Alcaligenaceae › Bordetella

Protein attributes

Sequence length	352 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	trehalose biosynthetic process Inferred from electronic annotation. Source: InterPro
Molecular function	4-alpha-D-{(1->4)-alpha-D-glucano}trehalose trehalohydrolase activity Inferred from electronic annotation. Source: InterPro cation binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q7W6L0 [UniParc]. Last modified October 1, 2003. Version 1. Checksum: 99FEA3C224B254A9	FASTA	352	38,246
	10 20 30 40 50 60 MQRYFIDNAL YWLREYRFDG LRLDAVHAMG RTDWLAGLAR EARAACPDRR VHLVVENDAN 70 80 90 100 110 120 QASLLEQGFD AQWNDDAHHV LHHLLTGERQ GYYADYAQAP AALLARALGE GYVYQGQAAP 130 140 150 160 170 180 TRGGRARGEP SAHLPPWAFV LFLHNHDQVG NRADGLRLTS LLAPGSPALR AAIALQLLAP 190 200 210 220 230 240 HIPLLFMGEE YGSTAPFFYF TSHGPELAAA VRAGRAREFA ASMHDCDPPP DPNDPDTYRR 250 260 270 280 290 300 SCPWPPPGAE RQAWFEYYRE LLRLRARLLG GRLTGARADG AAALGPAAVR AAWRLGDGAR 310 320 330 340 350 LTLYANLLPG SVIVPAPPAG QLAYARLAGA GQDLAAGVLR GGCALALWEP AP

References

[1]

"Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica." Parkhill J., Sebaihia M., Preston A., Murphy L.D., Thomson N.R., Harris D.E., Holden M.T.G., Churcher C.M., Bentley S.D., Mungall K.L., Cerdeno-Tarraga A.-M., Temple L., James K.D., Harris B., Quail M.A., Achtman M., Atkin R., Baker S. , Basham D., Bason N., Cherevach I., Chillingworth T., Collins M., Cronin A., Davis P., Doggett J., Feltwell T., Goble A., Hamlin N., Hauser H., Holroyd S., Jagels K., Leather S., Moule S., Norberczak H., O'Neil S., Ormond D., Price C., Rabbinowitsch E., Rutter S., Sanders M., Saunders D., Seeger K., Sharp S., Simmonds M., Skelton J., Squares R., Squares S., Stevens K., Unwin L., Whitehead S., Barrell B.G., Maskell D.J. Nat. Genet. 35:32-40(2003) [PubMed: 12910271] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 12822 / ATCC BAA-587 / NCTC 13253.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BX640431 Genomic DNA. Translation: CAE38189.1.
RefSeq	NP_885092.1. NC_002928.3.
3D structure databases
HSSP	HSSP built from PDB template 1EH9 based on UniProtKB Q55088.
ProteinModelPortal	Q7W6L0.
ModBase	Search...
Protein family/group databases
CAZy	GH13. Glycoside Hydrolase Family 13.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1666677.
GenomeReviews	Gene locus BPP2896 in contig BX470249_GR.
KEGG	bpa:BPP2896.
NMPDR	fig|257311.1.peg.2726.
PATRIC	21149738. VBIBorPar43418_3045.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG367595.
OMA	NIDKEML.
Family and domain databases
InterPro	IPR015902. Alpha_amylase. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. IPR022567. Maltooligo_trehalose_bac_C. IPR012768. Trehalose_TreZ. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 2 hits.
PANTHER	PTHR10357. Alpha_amylase. 1 hit. PTHR10357:SF21. PTHR10357:SF21. 1 hit.
Pfam	PF11941. DUF3459. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q7W6L0_BORPA

Accession

Primary (citable) accession number: Q7W6L0

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2003
Last sequence update:	October 1, 2003
Last modified:	December 14, 2011
This is version 43 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)