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Protein
Submitted name:

Methyl-accepting chemotaxis protein

Gene

BPP2992

Organism
Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciBPAR257311:BPP2992-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Methyl-accepting chemotaxis proteinImported
Gene namesi
Ordered Locus Names:BPP2992Imported
OrganismiBordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253)Imported
Taxonomic identifieri257311 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesAlcaligenaceaeBordetella
Proteomesi
  • UP000001421 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei192 – 21423HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2828Sequence analysisAdd
BLAST
Chaini29 – 563535Sequence analysisPRO_5004294790Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliQ7W6C4.
SMRiQ7W6C4. Positions 294-518.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini216 – 26853HAMPInterPro annotationAdd
BLAST
Domaini273 – 502230Methyl-accepting transducerInterPro annotationAdd
BLAST

Keywords - Domaini

SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

HOGENOMiHOG000148074.
KOiK03406.
OMAiWRTYAGM.
OrthoDBiEOG6Q2SVZ.

Family and domain databases

InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR003122. Chemotax_Me-accpt_rcpt_lig-bd.
IPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
PF02203. TarH. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMiSSF47170. SSF47170. 1 hit.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q7W6C4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRKKLKLAAA LSATLAFFVL LFAAAAGAGV AVLRDNQAAI EALGRGNIER
60 70 80 90 100
ASDLGDTTSW LFQARAVLAD AKTYMEGGLE EQRDAALAQA ATLLEQARAS
110 120 130 140 150
QERLRANPEM AAQGASLYDE VLAGYDALAV QALAPLHAAL KGWNGIEANR
160 170 180 190 200
LAERALPQAA ERYIEAVDAF QGYAREQGRA AVADAARVLE RMVLGAAALL
210 220 230 240 250
ALVAVLAVVI RLGFRRAMLR PLTEAGRHFD RIADGDLTAA IAARGDNEIG
260 270 280 290 300
VLYSAMRRMQ GGLTRAVESV RHGVEEIHTG SGEIAAGGVE MSGRTARQAG
310 320 330 340 350
ALQEAAASMA ELAGTVRATA EHADQASRQA AGATELARQG GTAVAQVVAS
360 370 380 390 400
MRDIASGAQR IAEIVGLVDS LAFQTNVLAL NAAVEAARAG PQGRGFAVVA
410 420 430 440 450
GEVRSLAQRS AQAAREIKGL IDDSSARVAS GVQQVNLAGA TMGEIVQSID
460 470 480 490 500
RVTQLVAGIS EASATQAAGI ASVNLAVADA ERATQQNAAM AEQTAAAAAS
510 520 530 540 550
LEAQAQALRQ AVAVFRLAGV APRSGGAGGQ LVALDQQRQV AVLDLLLDAG
560
GGRGEVLRAN VAA
Length:563
Mass (Da):57,788
Last modified:October 1, 2003 - v1
Checksum:i5EC791A3669FA5CF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX640432 Genomic DNA. Translation: CAE38282.1.

Genome annotation databases

EnsemblBacteriaiCAE38282; CAE38282; BPP2992.
KEGGibpa:BPP2992.
PATRICi21149937. VBIBorPar43418_3144.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX640432 Genomic DNA. Translation: CAE38282.1.

3D structure databases

ProteinModelPortaliQ7W6C4.
SMRiQ7W6C4. Positions 294-518.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAE38282; CAE38282; BPP2992.
KEGGibpa:BPP2992.
PATRICi21149937. VBIBorPar43418_3144.

Phylogenomic databases

HOGENOMiHOG000148074.
KOiK03406.
OMAiWRTYAGM.
OrthoDBiEOG6Q2SVZ.

Enzyme and pathway databases

BioCyciBPAR257311:BPP2992-MONOMER.

Family and domain databases

InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR003122. Chemotax_Me-accpt_rcpt_lig-bd.
IPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
PF02203. TarH. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMiSSF47170. SSF47170. 1 hit.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica."
    Parkhill J., Sebaihia M., Preston A., Murphy L.D., Thomson N., Harris D.E., Holden M.T., Churcher C.M., Bentley S.D., Mungall K.L., Cerdeno-Tarraga A.M., Temple L., James K., Harris B., Quail M.A., Achtman M., Atkin R., Baker S.
    , Basham D., Bason N., Cherevach I., Chillingworth T., Collins M., Cronin A., Davis P., Doggett J., Feltwell T., Goble A., Hamlin N., Hauser H., Holroyd S., Jagels K., Leather S., Moule S., Norberczak H., O'Neil S., Ormond D., Price C., Rabbinowitsch E., Rutter S., Sanders M., Saunders D., Seeger K., Sharp S., Simmonds M., Skelton J., Squares R., Squares S., Stevens K., Unwin L., Whitehead S., Barrell B.G., Maskell D.J.
    Nat. Genet. 35:32-40(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 12822 / ATCC BAA-587 / NCTC 13253Imported.

Entry informationi

Entry nameiQ7W6C4_BORPA
AccessioniPrimary (citable) accession number: Q7W6C4
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2003
Last sequence update: October 1, 2003
Last modified: March 16, 2016
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.