Q7W5S2 (Q7W5S2_BORPA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
2-oxoglutarate dehydrogenase E1 component EMBL CAE38502.1
EC=1.2.4.2 EMBL CAE38502.1

Gene names

Name:	odhA EMBL CAE38502.1
Ordered Locus Names:	BPP3217

Organism

Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253) [Complete proteome] [HAMAP]

Taxonomic identifier

257311 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Alcaligenaceae › Bordetella › Bordetella parapertussis

Protein attributes

Sequence length	957 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Oxidoreductase EMBL CAE38502.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	tricarboxylic acid cycle Inferred from electronic annotation. Source: InterPro
Molecular_function	oxoglutarate dehydrogenase (succinyl-transferring) activity Inferred from electronic annotation. Source: EC thiamine pyrophosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q7W5S2 [UniParc]. Last modified October 1, 2003. Version 1. Checksum: F27D2576BF516A32	FASTA	957	106,601
	10 20 30 40 50 60 MSTESESLST SYLFGGNAPY VEELYESYLD NPGSVPDNWR EYFDQLQHSP ATDGQEATRD 70 80 90 100 110 120 QAHAPIVESF AQRARANAFV QRVAEPDLSV ASKQVSVQSL IAAYRSLGSR WADLDPLKRQ 130 140 150 160 170 180 ERPAIPELDP AFYGLTEADL DQVYSATNTY FTTASTMTLR DILKALRDTY CRSVGAEFMH 190 200 210 220 230 240 ISDPAAKRWI QQRLESTFSA PVFSTEEKRH ILQQLTESEG LERFLHTKYV GQKRFSLEGG 250 260 270 280 290 300 ESFIASMDEV VNHAGESGVQ EIVVGMAHRG RLNLLVNIMG KMPGDLFAEF EGKHAEGLTD 310 320 330 340 350 360 GDVKYHNGFS SDLSTRGGPV HLSLAFNPSH LEIVNPVVEG SVRARQERRG DGEGKQVLPV 370 380 390 400 410 420 LVHGDAAFAG QGVVMETLNL AQTRGYGTGG TLHIVINNQI GFTTSDPRDS RSTLYCTDVV 430 440 450 460 470 480 KMIEAPVFHV NGDDPEAVVF ATRLALDYRM QFRHDVVLDI VCFRKLGHNE QDTPSLTQPL 490 500 510 520 530 540 MYKRIGHHPG TRKLYADKLT TQGVLAEGDA DQLVKDYRQL MEDGQRTIEP VLTDYKSKYA 550 560 570 580 590 600 IDWSPFLGAK WTDQADTAVP LAELKRIGER ITTTVPEGFT VHPLVAKLLN DRRNMAKGEV 610 620 630 640 650 660 NLDWGMGEHL AFATLVASGY AVRITGQDSG RGTFTHRHAV LHDQNRERWN DGFYVPLQNV 670 680 690 700 710 720 SEGQAPFTVI DSVLSEEAVL AFEYGYSSVE PNTLTIWEAQ FGDFVNGAQV VIDQFITAGE 730 740 750 760 770 780 AKWGRQSGLT LMLPHGYEGQ GPEHSSGRIE RFLQLCADHN IQVVQPTSAA QIFHLLRRQM 790 800 810 820 830 840 IRPFRKPLVI FTPKSLLRNK DAGSPLTDLA GGSFRPVIGE VDESIKAASV KRVLACSGKV 850 860 870 880 890 900 YYDLVNARRE RGADHVAIVR VEQLYPFAHK AFETELRKYP KATEVIWVQD EPQNQGPWFY 910 920 930 940 950 VQHHLYENMA DGQKLGYAGR AASASPAVGY LAKHQEQQKA LIEQAFAAKY KGFMLTK

References

[1]

"Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica." Parkhill J., Sebaihia M., Preston A., Murphy L.D., Thomson N.R., Harris D.E., Holden M.T.G., Churcher C.M., Bentley S.D., Mungall K.L., Cerdeno-Tarraga A.-M., Temple L., James K.D., Harris B., Quail M.A., Achtman M., Atkin R., Baker S. , Basham D., Bason N., Cherevach I., Chillingworth T., Collins M., Cronin A., Davis P., Doggett J., Feltwell T., Goble A., Hamlin N., Hauser H., Holroyd S., Jagels K., Leather S., Moule S., Norberczak H., O'Neil S., Ormond D., Price C., Rabbinowitsch E., Rutter S., Sanders M., Saunders D., Seeger K., Sharp S., Simmonds M., Skelton J., Squares R., Squares S., Stevens K., Unwin L., Whitehead S., Barrell B.G., Maskell D.J. Nat. Genet. 35:32-40(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 12822 / ATCC BAA-587 / NCTC 13253.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BX640432 Genomic DNA. Translation: CAE38502.1.
RefSeq	NP_885386.1. NC_002928.3.
3D structure databases
ProteinModelPortal	Q7W5S2.
SMR	Q7W5S2. Positions 91-949.
ModBase	Search...
Protein-protein interaction databases
STRING	257311.BPP3217.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CAE38502; CAE38502; BPP3217.
GeneID	1668104.
KEGG	bpa:BPP3217.
PATRIC	21150402. VBIBorPar43418_3376.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000259586.
KO	K00164.
OMA	IIKRGGA.
ProtClustDB	PRK09404.
Enzyme and pathway databases
BioCyc	BPAR257311:BPP3217-MONOMER.
Family and domain databases
InterPro	IPR011603. 2oxoglutarate_DH_E1. IPR001017. DH_E1. IPR005475. Transketolase-like_Pyr-bd. [Graphical view]
PANTHER	PTHR23152. PTHR23152. 1 hit.
Pfam	PF00676. E1_dh. 1 hit. PF02779. Transket_pyr. 1 hit. [Graphical view]
PIRSF	PIRSF000157. Oxoglu_dh_E1. 1 hit.
SMART	SM00861. Transket_pyr. 1 hit. [Graphical view]
TIGRFAMs	TIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q7W5S2_BORPA

Accession

Primary (citable) accession number: Q7W5S2

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2003
Last sequence update:	October 1, 2003
Last modified:	May 1, 2013
This is version 68 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)