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Q7W5S2

- Q7W5S2_BORPA

UniProt

Q7W5S2 - Q7W5S2_BORPA

Protein
Submitted name:

2-oxoglutarate dehydrogenase E1 component

Gene

odhA

Organism
Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 74 (01 Oct 2014)
      Sequence version 1 (01 Oct 2003)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. oxoglutarate dehydrogenase (succinyl-transferring) activity Source: UniProtKB-EC
    2. thiamine pyrophosphate binding Source: InterPro

    GO - Biological processi

    1. tricarboxylic acid cycle Source: InterPro

    Keywords - Molecular functioni

    OxidoreductaseImported

    Enzyme and pathway databases

    BioCyciBPAR257311:BPP3217-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    2-oxoglutarate dehydrogenase E1 componentImported (EC:1.2.4.2Imported)
    Gene namesi
    Name:odhAImported
    Ordered Locus Names:BPP3217Imported
    OrganismiBordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253)Imported
    Taxonomic identifieri257311 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesAlcaligenaceaeBordetella
    ProteomesiUP000001421: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi257311.BPP3217.

    Structurei

    3D structure databases

    ProteinModelPortaliQ7W5S2.
    SMRiQ7W5S2. Positions 91-949.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000259586.
    KOiK00164.
    OMAiGHQNANL.
    OrthoDBiEOG6V1M1F.

    Family and domain databases

    Gene3Di3.40.50.970. 2 hits.
    InterProiIPR011603. 2oxoglutarate_DH_E1.
    IPR001017. DH_E1.
    IPR029061. THDP-binding.
    IPR005475. Transketolase-like_Pyr-bd.
    [Graphical view]
    PANTHERiPTHR23152. PTHR23152. 1 hit.
    PfamiPF00676. E1_dh. 1 hit.
    PF02779. Transket_pyr. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
    SMARTiSM00861. Transket_pyr. 1 hit.
    [Graphical view]
    SUPFAMiSSF52518. SSF52518. 2 hits.
    TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q7W5S2-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSTESESLST SYLFGGNAPY VEELYESYLD NPGSVPDNWR EYFDQLQHSP    50
    ATDGQEATRD QAHAPIVESF AQRARANAFV QRVAEPDLSV ASKQVSVQSL 100
    IAAYRSLGSR WADLDPLKRQ ERPAIPELDP AFYGLTEADL DQVYSATNTY 150
    FTTASTMTLR DILKALRDTY CRSVGAEFMH ISDPAAKRWI QQRLESTFSA 200
    PVFSTEEKRH ILQQLTESEG LERFLHTKYV GQKRFSLEGG ESFIASMDEV 250
    VNHAGESGVQ EIVVGMAHRG RLNLLVNIMG KMPGDLFAEF EGKHAEGLTD 300
    GDVKYHNGFS SDLSTRGGPV HLSLAFNPSH LEIVNPVVEG SVRARQERRG 350
    DGEGKQVLPV LVHGDAAFAG QGVVMETLNL AQTRGYGTGG TLHIVINNQI 400
    GFTTSDPRDS RSTLYCTDVV KMIEAPVFHV NGDDPEAVVF ATRLALDYRM 450
    QFRHDVVLDI VCFRKLGHNE QDTPSLTQPL MYKRIGHHPG TRKLYADKLT 500
    TQGVLAEGDA DQLVKDYRQL MEDGQRTIEP VLTDYKSKYA IDWSPFLGAK 550
    WTDQADTAVP LAELKRIGER ITTTVPEGFT VHPLVAKLLN DRRNMAKGEV 600
    NLDWGMGEHL AFATLVASGY AVRITGQDSG RGTFTHRHAV LHDQNRERWN 650
    DGFYVPLQNV SEGQAPFTVI DSVLSEEAVL AFEYGYSSVE PNTLTIWEAQ 700
    FGDFVNGAQV VIDQFITAGE AKWGRQSGLT LMLPHGYEGQ GPEHSSGRIE 750
    RFLQLCADHN IQVVQPTSAA QIFHLLRRQM IRPFRKPLVI FTPKSLLRNK 800
    DAGSPLTDLA GGSFRPVIGE VDESIKAASV KRVLACSGKV YYDLVNARRE 850
    RGADHVAIVR VEQLYPFAHK AFETELRKYP KATEVIWVQD EPQNQGPWFY 900
    VQHHLYENMA DGQKLGYAGR AASASPAVGY LAKHQEQQKA LIEQAFAAKY 950
    KGFMLTK 957
    Length:957
    Mass (Da):106,601
    Last modified:October 1, 2003 - v1
    Checksum:iF27D2576BF516A32
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BX640432 Genomic DNA. Translation: CAE38502.1.
    RefSeqiNP_885386.1. NC_002928.3.
    WP_010928955.1. NC_002928.3.

    Genome annotation databases

    EnsemblBacteriaiCAE38502; CAE38502; BPP3217.
    GeneIDi1668104.
    KEGGibpa:BPP3217.
    PATRICi21150402. VBIBorPar43418_3376.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BX640432 Genomic DNA. Translation: CAE38502.1 .
    RefSeqi NP_885386.1. NC_002928.3.
    WP_010928955.1. NC_002928.3.

    3D structure databases

    ProteinModelPortali Q7W5S2.
    SMRi Q7W5S2. Positions 91-949.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 257311.BPP3217.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAE38502 ; CAE38502 ; BPP3217 .
    GeneIDi 1668104.
    KEGGi bpa:BPP3217.
    PATRICi 21150402. VBIBorPar43418_3376.

    Phylogenomic databases

    HOGENOMi HOG000259586.
    KOi K00164.
    OMAi GHQNANL.
    OrthoDBi EOG6V1M1F.

    Enzyme and pathway databases

    BioCyci BPAR257311:BPP3217-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.970. 2 hits.
    InterProi IPR011603. 2oxoglutarate_DH_E1.
    IPR001017. DH_E1.
    IPR029061. THDP-binding.
    IPR005475. Transketolase-like_Pyr-bd.
    [Graphical view ]
    PANTHERi PTHR23152. PTHR23152. 1 hit.
    Pfami PF00676. E1_dh. 1 hit.
    PF02779. Transket_pyr. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000157. Oxoglu_dh_E1. 1 hit.
    SMARTi SM00861. Transket_pyr. 1 hit.
    [Graphical view ]
    SUPFAMi SSF52518. SSF52518. 2 hits.
    TIGRFAMsi TIGR00239. 2oxo_dh_E1. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica."
      Parkhill J., Sebaihia M., Preston A., Murphy L.D., Thomson N.R., Harris D.E., Holden M.T.G., Churcher C.M., Bentley S.D., Mungall K.L., Cerdeno-Tarraga A.-M., Temple L., James K.D., Harris B., Quail M.A., Achtman M., Atkin R., Baker S.
      , Basham D., Bason N., Cherevach I., Chillingworth T., Collins M., Cronin A., Davis P., Doggett J., Feltwell T., Goble A., Hamlin N., Hauser H., Holroyd S., Jagels K., Leather S., Moule S., Norberczak H., O'Neil S., Ormond D., Price C., Rabbinowitsch E., Rutter S., Sanders M., Saunders D., Seeger K., Sharp S., Simmonds M., Skelton J., Squares R., Squares S., Stevens K., Unwin L., Whitehead S., Barrell B.G., Maskell D.J.
      Nat. Genet. 35:32-40(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 12822 / ATCC BAA-587 / NCTC 13253Imported.

    Entry informationi

    Entry nameiQ7W5S2_BORPA
    AccessioniPrimary (citable) accession number: Q7W5S2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 1, 2003
    Last sequence update: October 1, 2003
    Last modified: October 1, 2014
    This is version 74 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3