Q7W5Q3 (Q7W5Q3_BORPA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
2-methylcitrate dehydratase EMBL CAE38522.1
EC=4.2.1.79 EMBL CAE38522.1

Gene names

Name:	prpD EMBL CAE38522.1
Ordered Locus Names:	BPP3237

Organism

Bordetella parapertussis [Complete proteome] [HAMAP]

Taxonomic identifier

519 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Alcaligenaceae › Bordetella

Protein attributes

Sequence length	485 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Lyase EMBL CAE38522.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	propionate catabolic process, 2-methylcitrate cycle Inferred from electronic annotation. Source: InterPro
Molecular function	2 iron, 2 sulfur cluster binding Inferred from electronic annotation. Source: InterPro 2-methylcitrate dehydratase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q7W5Q3 [UniParc]. Last modified October 1, 2003. Version 1. Checksum: EEC24C8E5BC8D2FA	FASTA	485	53,725
	10 20 30 40 50 60 MSHATIPFNQ RPAWDSALAD IVDYVLDYEV QGKLAYETAR NCLIDTLGCG MEALEYPACR 70 80 90 100 110 120 KLLGPVVPGT VVPHGAKVPG TQFQLDPVQA AFNIGAMIRW LDFNDTWLAA EWGHPSDNLG 130 140 150 160 170 180 GILATADWLS RSAVANGRPP LAMRDVLTAM IKAHEIQGCI ALENSFNKVG LDHVVLVKVA 190 200 210 220 230 240 STAVVAHMLG LSREEILNAV SLAWVDGQSL RTYRHAPNTG SRKSWAAGDA TSRAVRLALI 250 260 270 280 290 300 ARTGEMGYPS ALTAPTWGFY DVLFKGQPFR FQRPYGSYVM ENVLFKISFP AEFHAQTAVE 310 320 330 340 350 360 CAMEIHALLK ARGKSADDIR RITIRTHEAC IRIIDKQGPL NNPADRDHCI QYMVAVPILY 370 380 390 400 410 420 GRLTAADYED GIARDPRIDA LRARIVCVED PAFTTDYHDP AKRSIANALT VEFNDGSRLD 430 440 450 460 470 480 EIVCEYPIGH RRRRADGIPL LEAKFRTNLA RAFPARQQER ILAASLDQEK LEAMPVNEYV DLYVI

References

[1]

"Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica." Parkhill J., Sebaihia M., Preston A., Murphy L.D., Thomson N.R., Harris D.E., Holden M.T.G., Churcher C.M., Bentley S.D., Mungall K.L., Cerdeno-Tarraga A.-M., Temple L., James K.D., Harris B., Quail M.A., Achtman M., Atkin R., Baker S. , Basham D., Bason N., Cherevach I., Chillingworth T., Collins M., Cronin A., Davis P., Doggett J., Feltwell T., Goble A., Hamlin N., Hauser H., Holroyd S., Jagels K., Leather S., Moule S., Norberczak H., O'Neil S., Ormond D., Price C., Rabbinowitsch E., Rutter S., Sanders M., Saunders D., Seeger K., Sharp S., Simmonds M., Skelton J., Squares R., Squares S., Stevens K., Unwin L., Whitehead S., Barrell B.G., Maskell D.J. Nat. Genet. 35:32-40(2003) [PubMed: 12910271] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 12822 / ATCC BAA-587 / NCTC 13253.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BX640433 Genomic DNA. Translation: CAE38522.1.
RefSeq	NP_885405.1. NC_002928.3.
3D structure databases
ProteinModelPortal	Q7W5Q3.
SMR	Q7W5Q3. Positions 14-485.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1666140.
GenomeReviews	Gene locus BPP3237 in contig BX470249_GR.
KEGG	bpa:BPP3237.
PATRIC	21150450. VBIBorPar43418_3400.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG298383.
OMA	CLMDTLG.
PhylomeDB	Q7W5Q3.
ProtClustDB	PRK09425.
Family and domain databases
InterPro	IPR012705. 2Me_IsoCit_deHydtase_PrpD. IPR005656. MmgE_PrpD. [Graphical view]
KO	K01720.
PANTHER	PTHR16943. MmgE_PrpD. 1 hit.
Pfam	PF03972. MmgE_PrpD. 1 hit. [Graphical view]
SUPFAM	SSF103378. MmgE_PrpD. 1 hit.
TIGRFAMs	TIGR02330. PrpD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q7W5Q3_BORPA

Accession

Primary (citable) accession number: Q7W5Q3

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2003
Last sequence update:	October 1, 2003
Last modified:	December 14, 2011
This is version 41 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)