Q7W434 (Q7W434_BORPA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative membrane-bound lytic murein transglycosylase D (Putative membrane-bound protein) EMBL CAE39120.1

Gene names

Ordered Locus Names:

BPP3837

Organism

Bordetella parapertussis [Complete proteome] [HAMAP]

Taxonomic identifier

519 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Alcaligenaceae › Bordetella

Protein attributes

Sequence length	469 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cell wall macromolecule catabolic process Inferred from electronic annotation. Source: InterPro peptidoglycan metabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	membrane Inferred from electronic annotation. Source: InterPro
Molecular function	lytic transglycosylase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q7W434 [UniParc]. Last modified October 1, 2003. Version 1. Checksum: 566B91ABBC9BE616	FASTA	469	51,572
	10 20 30 40 50 60 MRFLRLLLPL FLAVLAGCAG TAKQNQAAGP SSNRYIAQDT SRTVDLTSPP SDAWDRIRRG 70 80 90 100 110 120 FAIPNLNTDL AQEWTDYYAS HPESVQRMAE RAGKYLYFIV DEINRRGLPT ELALLPFVES 130 140 150 160 170 180 AYNPTALSRS QASGLWQFIP TTGQHFNLKQ DWWRDERRDP IASTYAALNY LEKLFEMQGD 190 200 210 220 230 240 WYLALASYNW GEGSVQRAMA KNEAAGLGTD YLSLNMPDET RNYVPKLQAI KNIIANPRKF 250 260 270 280 290 300 AVVLPPVENT PYFVAVQKNR DIDIELAARL AEMPLDEFKA LNPAFKRPLI RGEHAPTLLL 310 320 330 340 350 360 PADRADRFNA NLQNYKGDLS SWKVYHTRRG ESYAAIAKRF GISEAKLRAN NDISSKRKVA 370 380 390 400 410 420 AGQALLIPGV PSGDGAANIQ LASLSPPVGA LDNVGEPRAA AAPRGKAPAR VAGARPNVRT 430 440 450 460 HKVSSGDTLF GLARKYGTSV GALRALNNLK GNNLKLGSQL RIPGTGTRG

References

[1]

"Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica." Parkhill J., Sebaihia M., Preston A., Murphy L.D., Thomson N.R., Harris D.E., Holden M.T.G., Churcher C.M., Bentley S.D., Mungall K.L., Cerdeno-Tarraga A.-M., Temple L., James K.D., Harris B., Quail M.A., Achtman M., Atkin R., Baker S. , Basham D., Bason N., Cherevach I., Chillingworth T., Collins M., Cronin A., Davis P., Doggett J., Feltwell T., Goble A., Hamlin N., Hauser H., Holroyd S., Jagels K., Leather S., Moule S., Norberczak H., O'Neil S., Ormond D., Price C., Rabbinowitsch E., Rutter S., Sanders M., Saunders D., Seeger K., Sharp S., Simmonds M., Skelton J., Squares R., Squares S., Stevens K., Unwin L., Whitehead S., Barrell B.G., Maskell D.J. Nat. Genet. 35:32-40(2003) [PubMed: 12910271] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 12822 / ATCC BAA-587 / NCTC 13253.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BX640434 Genomic DNA. Translation: CAE39120.1.
RefSeq	NP_885989.1. NC_002928.3.
3D structure databases
ProteinModelPortal	Q7W434.
ModBase	Search...
Protein family/group databases
CAZy	CBM50. Carbohydrate-Binding Module Family 50. GH23. Glycoside Hydrolase Family 23.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1667380.
GenomeReviews	Gene locus BPP3837 in contig BX470249_GR.
KEGG	bpa:BPP3837.
NMPDR	fig|257311.1.peg.3623.
PATRIC	21151735. VBIBorPar43418_4027.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG519241.
OMA	SLYLHYI.
PhylomeDB	Q7W434.
ProtClustDB	CLSK920984.
Family and domain databases
InterPro	IPR023346. Lysozyme-like_dom. IPR008258. Lytic_TGlycosylase-like_cat. IPR018392. Peptidoglycan-bd_lysin. IPR002482. Peptidoglycan-bd_Lysin_subgr. IPR000189. Transglyc_AS. [Graphical view]
KO	K08307.
Pfam	PF01476. LysM. 2 hits. PF01464. SLT. 1 hit. [Graphical view]
SMART	SM00257. LysM. 2 hits. [Graphical view]
SUPFAM	SSF53955. SSF53955. 1 hit.
PROSITE	PS00922. TRANSGLYCOSYLASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q7W434_BORPA

Accession

Primary (citable) accession number: Q7W434

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2003
Last sequence update:	October 1, 2003
Last modified:	December 14, 2011
This is version 46 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)