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Q7W1D3

- DCD_BORPA

UniProt

Q7W1D3 - DCD_BORPA

Protein

Deoxycytidine triphosphate deaminase

Gene

dcd

Organism
Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 61 (01 Oct 2014)
      Sequence version 1 (01 Oct 2003)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    dCTP + H2O = dUTP + NH3.UniRule annotation

    Pathwayi

    GO - Molecular functioni

    1. dCTP deaminase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. dUMP biosynthetic process Source: UniProtKB-UniPathway
    2. dUTP biosynthetic process Source: InterPro
    3. pyrimidine ribonucleotide biosynthetic process Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Hydrolase

    Keywords - Biological processi

    Nucleotide metabolism

    Enzyme and pathway databases

    BioCyciBPAR257311:BPP0760-MONOMER.
    UniPathwayiUPA00610; UER00665.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Deoxycytidine triphosphate deaminaseUniRule annotation (EC:3.5.4.13UniRule annotation)
    Short name:
    dCTP deaminaseUniRule annotation
    Gene namesi
    Name:dcdUniRule annotation
    Ordered Locus Names:BPP0760
    OrganismiBordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253)
    Taxonomic identifieri257311 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesAlcaligenaceaeBordetella
    ProteomesiUP000001421: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 187187Deoxycytidine triphosphate deaminasePRO_0000155967Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi257311.BPP0760.

    Structurei

    3D structure databases

    ProteinModelPortaliQ7W1D3.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the dCTP deaminase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0717.
    HOGENOMiHOG000228600.
    KOiK01494.
    OMAiEFEGHIT.
    OrthoDBiEOG67DPKR.

    Family and domain databases

    Gene3Di2.70.40.10. 1 hit.
    HAMAPiMF_00146. dCTP_deaminase.
    InterProiIPR011962. dCTP_deam.
    IPR029054. dUTPase-like.
    IPR008180. dUTPase/dCTP_deaminase.
    [Graphical view]
    PfamiPF00692. dUTPase. 1 hit.
    [Graphical view]
    SUPFAMiSSF51283. SSF51283. 1 hit.
    TIGRFAMsiTIGR02274. dCTP_deam. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q7W1D3-1 [UniParc]FASTAAdd to Basket

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    MSIKSDRWIR RAAEAGMIEP FEPGQVRTAG GNRIVSYGTS SYGYDVRCAD    50
    EFKIFTNINS TIVDPKQFDE KSFVDFKGDV CIIPPNSFAL ARTVEYFRIP 100
    RSVLTICLGK STYARCGIIV NVTPLEPEWE GHVTLEFSNT TPLPAKIYAG 150
    EGCAQMLFLE SDEVCETSYR DRGGKYQGQR GVTLPRT 187
    Length:187
    Mass (Da):20,900
    Last modified:October 1, 2003 - v1
    Checksum:i0A123CB8A2259672
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BX640425 Genomic DNA. Translation: CAE40169.1.
    RefSeqiNP_883095.1. NC_002928.3.

    Genome annotation databases

    EnsemblBacteriaiCAE40169; CAE40169; BPP0760.
    GeneIDi1668522.
    KEGGibpa:BPP0760.
    PATRICi21145127. VBIBorPar43418_0783.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BX640425 Genomic DNA. Translation: CAE40169.1 .
    RefSeqi NP_883095.1. NC_002928.3.

    3D structure databases

    ProteinModelPortali Q7W1D3.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 257311.BPP0760.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAE40169 ; CAE40169 ; BPP0760 .
    GeneIDi 1668522.
    KEGGi bpa:BPP0760.
    PATRICi 21145127. VBIBorPar43418_0783.

    Phylogenomic databases

    eggNOGi COG0717.
    HOGENOMi HOG000228600.
    KOi K01494.
    OMAi EFEGHIT.
    OrthoDBi EOG67DPKR.

    Enzyme and pathway databases

    UniPathwayi UPA00610 ; UER00665 .
    BioCyci BPAR257311:BPP0760-MONOMER.

    Family and domain databases

    Gene3Di 2.70.40.10. 1 hit.
    HAMAPi MF_00146. dCTP_deaminase.
    InterProi IPR011962. dCTP_deam.
    IPR029054. dUTPase-like.
    IPR008180. dUTPase/dCTP_deaminase.
    [Graphical view ]
    Pfami PF00692. dUTPase. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51283. SSF51283. 1 hit.
    TIGRFAMsi TIGR02274. dCTP_deam. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica."
      Parkhill J., Sebaihia M., Preston A., Murphy L.D., Thomson N.R., Harris D.E., Holden M.T.G., Churcher C.M., Bentley S.D., Mungall K.L., Cerdeno-Tarraga A.-M., Temple L., James K.D., Harris B., Quail M.A., Achtman M., Atkin R., Baker S.
      , Basham D., Bason N., Cherevach I., Chillingworth T., Collins M., Cronin A., Davis P., Doggett J., Feltwell T., Goble A., Hamlin N., Hauser H., Holroyd S., Jagels K., Leather S., Moule S., Norberczak H., O'Neil S., Ormond D., Price C., Rabbinowitsch E., Rutter S., Sanders M., Saunders D., Seeger K., Sharp S., Simmonds M., Skelton J., Squares R., Squares S., Stevens K., Unwin L., Whitehead S., Barrell B.G., Maskell D.J.
      Nat. Genet. 35:32-40(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 12822 / ATCC BAA-587 / NCTC 13253.

    Entry informationi

    Entry nameiDCD_BORPA
    AccessioniPrimary (citable) accession number: Q7W1D3
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: March 1, 2004
    Last sequence update: October 1, 2003
    Last modified: October 1, 2014
    This is version 61 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3