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Q7W0Q6 (SYGA_BORPE) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 44. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Glycine--tRNA ligase alpha subunit
EC=6.1.1.14
Alternative name(s):
Glycyl-tRNA synthetase alpha subunit
Short name=GlyRS
Gene names
Name:glyQ
Ordered Locus Names:BP0033
OrganismBordetella pertussis
Taxonomic identifier520 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Alcaligenaceae › Bordetella

Protein attributes

Sequence length303 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-tRNA(Gly). HAMAP MF_00254

Subunit structure

Tetramer of two alpha and two beta subunits By similarity.

Subcellular location

Cytoplasm HAMAP MF_00254.

Sequence similarities

Belongs to the class-II aminoacyl-tRNA synthetase family.

Ontologies

Keywords
   Biological processProtein biosynthesis
   Cellular componentCytoplasm
   LigandATP-binding
Nucleotide-binding
   Molecular functionAminoacyl-tRNA synthetase
Ligase
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological processglycyl-tRNA aminoacylation

Inferred from electronic annotation. Source: InterPro

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functionATP binding

Inferred from electronic annotation. Source: UniProtKB-KW

glycine-tRNA ligase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 303303Glycine--tRNA ligase alpha subunit HAMAP MF_00254
PRO_1000047401

Sequences

Sequence LengthMass (Da)Tools
Q7W0Q6 [UniParc].

Last modified October 1, 2003. Version 1.
Checksum: 5D6557826E3D08C4

FASTA30334,401
        10         20         30         40         50         60 
MLTFQQIILT LQDYWDKQGC ALLQPYDMEV GAGTSHTATF LRAIGPEPWR AAYVQPSRRP 

        70         80         90        100        110        120 
KDGRYGENPN RLQHYYQYQV VLKPAPPEIL DLYIGSLKAL GIDPTQHDIR FVEDDWENPT 

       130        140        150        160        170        180 
LGAWGLGWEV WLNGMEVTQF TYFQQVGGLD CTPTTGEITY GLERLAMYLQ DVESVYDLVW 

       190        200        210        220        230        240 
TEGANGNRVY YRDVFHQNEV EQSTYNFEHA SADMLFAHFN DYEAEAKRLM DVPLALPAYE 

       250        260        270        280        290        300 
AALKAAHTFN MLDARGAISV TERAAYIGRI RNLSRAVAQA YYDSRERLGF PMLAGRKAAG 


EAA

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		BX640411 Genomic DNA. Translation: CAE40412.1.
RefSeqNP_878947.1. NC_002929.2.

3D structure databases

HSSPHSSP built from PDB template 1J5W based on UniProtKB Q9WY59.
ProteinModelPortalQ7W0Q6.
SMRQ7W0Q6. Positions 2-287.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID2664452.
GenomeReviewsGene locus BP0033 in contig BX470248_GR.
KEGGbpe:BP0033.
PATRIC21153054. VBIBorPer7866_0035.

Phylogenomic databases

HOGENOMHBG285316.
OMACRRPTDG.
PhylomeDBQ7W0Q6.
ProtClustDBPRK09348.

Enzyme and pathway databases

BioCycBPER257313:BP0033-MONOMER.

Family and domain databases

HAMAPMF_00254. Gly_tRNA_synth_alpha.
[Tree]
InterProIPR006194. Gly-tRNA-synth_II_heterodimer.
IPR002310. Gly-tRNA_synth_IIc_asu.
[Graphical view]
KOK01878.
PfamPF02091. tRNA-synt_2e. 1 hit.
[Graphical view]
PRINTSPR01044. TRNASYNTHGA.
TIGRFAMsTIGR00388. GlyQ. 1 hit.
PROSITEPS50861. AA_TRNA_LIGASE_II_GLYAB. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameSYGA_BORPE
AccessionPrimary (citable) accession number: Q7W0Q6
Entry history
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: October 1, 2003
Last modified: January 25, 2012
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Aminoacyl-tRNA synthetases

List of aminoacyl-tRNA synthetase entries

SIMILARITY comments

Index of protein domains and families

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