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Protein
Submitted name:

Aspartate aminotransferase

Gene

aspC

Organism
Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseUniRule annotationImported, Transferase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciBPER257313:BP1185-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Aspartate aminotransferaseImported (EC:2.6.1.1Imported)
Gene namesi
Name:aspCImported
Ordered Locus Names:BP1185Imported
OrganismiBordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)Imported
Taxonomic identifieri257313 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesAlcaligenaceaeBordetella
ProteomesiUP000002676 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi257313.BP1185.

Structurei

3D structure databases

ProteinModelPortaliQ7VYW8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000223062.
KOiK00812.
OMAiDMVLACD.
OrthoDBiEOG6RRKNS.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR004838. NHTrfase_class1_PyrdxlP-BS.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00105. AA_TRANSFER_CLASS_1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q7VYW8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSIVADKIKR IKLSPSVATR AIVAQLREEG RRVIDLTVGE PDFSTPAHIC
60 70 80 90 100
EAAIAAMQRG ETKYPPAQGT MPLRKAVRAR LREETGVDYP EGRIIVGTGA
110 120 130 140 150
KQVLYNGLAA TLNEGDEVII PAPYWVSYPD MVLVNGGVPV AVTATPATQY
160 170 180 190 200
KLTPQALEAA ITPRTKWLMM NAPSNPTGAI YTADEWRGLA EVLRRHPHVW
210 220 230 240 250
LMTDDIYARL NFTATPTVHP LQVAPELAER TLVVNGVSKA YAMTGWRIGY
260 270 280 290 300
GAGPEALIKA IAILQSQSTS GACSISQAAA REALAGPQDC VAEFARTFKA
310 320 330 340 350
RRDAAVAALQ GAPGLSVVMP EGAFYVFPDC AGVLGKTTPD GRVLETDTDF
360 370 380 390 400
VHYLLREAGV AVIDGTPYGV PGTFRLSFAA ALEDIQQGCA AIRAACERLA
Length:400
Mass (Da):42,726
Last modified:October 1, 2003 - v1
Checksum:i7DE6F13CD3650C47
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX640414 Genomic DNA. Translation: CAE41481.1.
RefSeqiNP_879959.1. NC_002929.2.
WP_010930235.1. NC_002929.2.

Genome annotation databases

EnsemblBacteriaiCAE41481; CAE41481; BP1185.
GeneIDi2666222.
KEGGibpe:BP1185.
PATRICi21155554. VBIBorPer7866_1276.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX640414 Genomic DNA. Translation: CAE41481.1.
RefSeqiNP_879959.1. NC_002929.2.
WP_010930235.1. NC_002929.2.

3D structure databases

ProteinModelPortaliQ7VYW8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi257313.BP1185.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAE41481; CAE41481; BP1185.
GeneIDi2666222.
KEGGibpe:BP1185.
PATRICi21155554. VBIBorPer7866_1276.

Phylogenomic databases

HOGENOMiHOG000223062.
KOiK00812.
OMAiDMVLACD.
OrthoDBiEOG6RRKNS.

Enzyme and pathway databases

BioCyciBPER257313:BP1185-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR004838. NHTrfase_class1_PyrdxlP-BS.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00105. AA_TRANSFER_CLASS_1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica."
    Parkhill J., Sebaihia M., Preston A., Murphy L.D., Thomson N., Harris D.E., Holden M.T., Churcher C.M., Bentley S.D., Mungall K.L., Cerdeno-Tarraga A.M., Temple L., James K., Harris B., Quail M.A., Achtman M., Atkin R., Baker S.
    , Basham D., Bason N., Cherevach I., Chillingworth T., Collins M., Cronin A., Davis P., Doggett J., Feltwell T., Goble A., Hamlin N., Hauser H., Holroyd S., Jagels K., Leather S., Moule S., Norberczak H., O'Neil S., Ormond D., Price C., Rabbinowitsch E., Rutter S., Sanders M., Saunders D., Seeger K., Sharp S., Simmonds M., Skelton J., Squares R., Squares S., Stevens K., Unwin L., Whitehead S., Barrell B.G., Maskell D.J.
    Nat. Genet. 35:32-40(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Tohama I / ATCC BAA-589 / NCTC 13251Imported.

Entry informationi

Entry nameiQ7VYW8_BORPE
AccessioniPrimary (citable) accession number: Q7VYW8
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2003
Last sequence update: October 1, 2003
Last modified: May 27, 2015
This is version 74 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.