Q7VYW8 (Q7VYW8_BORPE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Aspartate aminotransferase EMBL CAE41481.1
EC=2.6.1.1 EMBL CAE41481.1

Gene names

Name:	aspC EMBL CAE41481.1
Ordered Locus Names:	BP1185

Organism

Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251) [Reference proteome] [HAMAP]

Taxonomic identifier

257313 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Alcaligenaceae › Bordetella › Bordetella pertussis

Protein attributes

Sequence length	400 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000479
Sequence similarities	Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family. RuleBase RU000479

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000479
Molecular function	Aminotransferase RuleBase RU000481 EMBL CAE41481.1 Transferase
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	biosynthetic process Inferred from electronic annotation. Source: InterPro
Molecular_function	L-aspartate:2-oxoglutarate aminotransferase activity Inferred from electronic annotation. Source: EC L-phenylalanine:2-oxoglutarate aminotransferase activity Inferred from electronic annotation. Source: EC pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q7VYW8 [UniParc]. Last modified October 1, 2003. Version 1. Checksum: 7DE6F13CD3650C47	FASTA	400	42,726
	10 20 30 40 50 60 MSIVADKIKR IKLSPSVATR AIVAQLREEG RRVIDLTVGE PDFSTPAHIC EAAIAAMQRG 70 80 90 100 110 120 ETKYPPAQGT MPLRKAVRAR LREETGVDYP EGRIIVGTGA KQVLYNGLAA TLNEGDEVII 130 140 150 160 170 180 PAPYWVSYPD MVLVNGGVPV AVTATPATQY KLTPQALEAA ITPRTKWLMM NAPSNPTGAI 190 200 210 220 230 240 YTADEWRGLA EVLRRHPHVW LMTDDIYARL NFTATPTVHP LQVAPELAER TLVVNGVSKA 250 260 270 280 290 300 YAMTGWRIGY GAGPEALIKA IAILQSQSTS GACSISQAAA REALAGPQDC VAEFARTFKA 310 320 330 340 350 360 RRDAAVAALQ GAPGLSVVMP EGAFYVFPDC AGVLGKTTPD GRVLETDTDF VHYLLREAGV 370 380 390 400 AVIDGTPYGV PGTFRLSFAA ALEDIQQGCA AIRAACERLA

References

[1]

"Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica." Parkhill J., Sebaihia M., Preston A., Murphy L.D., Thomson N.R., Harris D.E., Holden M.T.G., Churcher C.M., Bentley S.D., Mungall K.L., Cerdeno-Tarraga A.-M., Temple L., James K.D., Harris B., Quail M.A., Achtman M., Atkin R., Baker S. , Basham D., Bason N., Cherevach I., Chillingworth T., Collins M., Cronin A., Davis P., Doggett J., Feltwell T., Goble A., Hamlin N., Hauser H., Holroyd S., Jagels K., Leather S., Moule S., Norberczak H., O'Neil S., Ormond D., Price C., Rabbinowitsch E., Rutter S., Sanders M., Saunders D., Seeger K., Sharp S., Simmonds M., Skelton J., Squares R., Squares S., Stevens K., Unwin L., Whitehead S., Barrell B.G., Maskell D.J. Nat. Genet. 35:32-40(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Tohama I / ATCC BAA-589 / NCTC 13251.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BX640414 Genomic DNA. Translation: CAE41481.1.
RefSeq	NP_879959.1. NC_002929.2.
3D structure databases
HSSP	HSSP built from PDB template 5BJ4 based on UniProtKB Q56232.
ProteinModelPortal	Q7VYW8.
ModBase	Search...
Protein-protein interaction databases
STRING	257313.BP1185.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CAE41481; CAE41481; BP1185.
GeneID	2666222.
KEGG	bpe:BP1185.
PATRIC	21155554. VBIBorPer7866_1276.
Phylogenomic databases
HOGENOM	HOG000223062.
KO	K00812.
OMA	KQILFLA.
ProtClustDB	CLSK266320.
Enzyme and pathway databases
BioCyc	BPER257313:BP1185-MONOMER.
Family and domain databases
Gene3D	3.40.640.10. 1 hit. 3.90.1150.10. 1 hit.
InterPro	IPR004839. Aminotransferase_I/II. IPR004838. NHTrfase_class1_PyrdxlP-BS. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
Pfam	PF00155. Aminotran_1_2. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
PROSITE	PS00105. AA_TRANSFER_CLASS_1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q7VYW8_BORPE

Accession

Primary (citable) accession number: Q7VYW8

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2003
Last sequence update:	October 1, 2003
Last modified:	May 1, 2013
This is version 65 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)