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Q7VYM4 (PSD_BORPE) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 44. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Phosphatidylserine decarboxylase proenzyme
EC=4.1.1.65

Cleaved into the following 2 chains:

  1. Phosphatidylserine decarboxylase alpha chain
  2. Phosphatidylserine decarboxylase beta chain
Gene names
Name:psd
Ordered Locus Names:BP1294
OrganismBordetella pertussis
Taxonomic identifier520 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Alcaligenaceae › Bordetella

Protein attributes

Sequence length297 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Phosphatidyl-L-serine = phosphatidylethanolamine + CO2. HAMAP MF_00662

Cofactor

Pyruvoyl group By similarity. HAMAP MF_00662

Pathway

Phospholipid metabolism; phosphatidylethanolamine biosynthesis; phosphatidylethanolamine from CDP-diacylglycerol: step 2/2. HAMAP MF_00662

Sequence similarities

Belongs to the phosphatidylserine decarboxylase family. Type 1 subfamily.

Ontologies

Keywords
   Biological processPhospholipid biosynthesis
   LigandPyruvate
   Molecular functionDecarboxylase
Lyase
   PTMZymogen
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological processphospholipid biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular functionphosphatidylserine decarboxylase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 253253Phosphatidylserine decarboxylase beta chain By similarity
PRO_0000029637
Chain254 – 29744Phosphatidylserine decarboxylase alpha chain By similarity
PRO_0000029638

Sites

Site253 – 2542Cleavage (non-hydrolytic) By similarity

Amino acid modifications

Modified residue2541Pyruvic acid (Ser) By similarity

Sequences

Sequence LengthMass (Da)Tools
Q7VYM4 [UniParc].

Last modified October 1, 2003. Version 1.
Checksum: 5C961374615FABB9

FASTA29732,614
        10         20         30         40         50         60 
MPFKDQLFLA SQYLAPHHLV SRLMGRVADC RAPEIKNRMI ARFVRRYNVD MSEALVEDPL 

        70         80         90        100        110        120 
AYASFNDFFT RALKPDARPL DDEPGAALCP ADGAISQIGA IDNGRIFQAK GHSFGLTDLL 

       130        140        150        160        170        180 
GGDAERAAPF AGGQFATIYL SPRDYHRVHM PLAGTLREMV HVPGRLFSVN PLTARSVPEL 

       190        200        210        220        230        240 
FARNERVACL FDTEHGPMAL VLVGAMIVAS IETVWAGLVT PHKRQVRSVR YDAAARAPIH 

       250        260        270        280        290 
LDKGAEMGRF KLGSTVIVLF GPKRLRWLDL PSVRGPVRMG ETLALPASTA ISFPESE

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		BX640414 Genomic DNA. Translation: CAE41590.1.
RefSeqNP_880061.1. NC_002929.2.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID2667140.
GenomeReviewsGene locus BP1294 in contig BX470248_GR.
KEGGbpe:BP1294.
PATRIC21155798. VBIBorPer7866_1395.

Phylogenomic databases

HOGENOMHBG302256.
OMASMATVWH.
PhylomeDBQ7VYM4.
ProtClustDBPRK00044.

Enzyme and pathway databases

BioCycBPER257313:BP1294-MONOMER.

Family and domain databases

HAMAPMF_00662. PS_decarb_type1.
[Tree]
InterProIPR003817. PS_Dcarbxylase.
IPR005221. PS_decarb.
[Graphical view]
KOK01613.
PANTHERPTHR10067. PS_decarb. 1 hit.
PfamPF02666. PS_Dcarbxylase. 1 hit.
[Graphical view]
TIGRFAMsTIGR00163. PS_decarb. 1 hit.
ProtoNetSearch...

Entry information

Entry namePSD_BORPE
AccessionPrimary (citable) accession number: Q7VYM4
Entry history
Integrated into UniProtKB/Swiss-Prot: December 15, 2003
Last sequence update: October 1, 2003
Last modified: January 25, 2012
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

PATHWAY comments

Index of metabolic and biosynthesis pathways

SIMILARITY comments

Index of protein domains and families

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