Q7VW93 (Q7VW93_BORPE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
2-methylcitrate dehydratase EMBL CAE42642.1
EC=4.2.1.79 EMBL CAE42642.1

Gene names

Name:	prpD EMBL CAE42642.1
Ordered Locus Names:	BP2371

Organism

Bordetella pertussis

Taxonomic identifier

520 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Alcaligenaceae › Bordetella

Protein attributes

Sequence length	485 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Lyase EMBL CAE42642.1
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	propionate catabolic process, 2-methylcitrate cycle Inferred from electronic annotation. Source: InterPro
Molecular function	2 iron, 2 sulfur cluster binding Inferred from electronic annotation. Source: InterPro 2-methylcitrate dehydratase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q7VW93 [UniParc]. Last modified October 1, 2003. Version 1. Checksum: 15A7588272089979	FASTA	485	53,795
	10 20 30 40 50 60 MSHATIPFNQ RPAWDSALAD IVDYVLDYEV QGKLAYETAR NCLIDTLGCG MEALEYPACR 70 80 90 100 110 120 KLLGPVVPGT VVPHGAKVPG TQFQLDPVQA AFNIGAMIRW LDFNDTWLAA EWGHPSDNLG 130 140 150 160 170 180 GILATADWLS RSAVANGRPP LAMRDVLTAM IKAHEIQGCI ALENSFNKVG LDHVVLVKVA 190 200 210 220 230 240 STAVVAHLLG LSREEILNAV SLAWVDGQSL RTYRHAPNTG SRKSWAAGDA TSRAVRLALI 250 260 270 280 290 300 ARTGEMGYPS ALTAPTWGFY DVLFKGQPFR FQRPYGSYVM ENVLFKISFP AEFHAQTAVE 310 320 330 340 350 360 CAMEIHALLK ARGKSADDIR RITIRTHEAC IRIIDKQGPL NNPADRDHCI QYMVAVPILY 370 380 390 400 410 420 GRLTAADYED DIARDPRIDA LRARIVCVED PAFTTDYHDP TKRSIANALT VEFNDGSRLD 430 440 450 460 470 480 EIVCEYPIGH RRRRADGIPL LEAKFRTNLA RAFPARQQER ILAASLDQEK LEAMPVNEYV DLYVI

References

[1]

"Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica." Parkhill J., Sebaihia M., Preston A., Murphy L.D., Thomson N.R., Harris D.E., Holden M.T.G., Churcher C.M., Bentley S.D., Mungall K.L., Cerdeno-Tarraga A.-M., Temple L., James K.D., Harris B., Quail M.A., Achtman M., Atkin R., Baker S. , Basham D., Bason N., Cherevach I., Chillingworth T., Collins M., Cronin A., Davis P., Doggett J., Feltwell T., Goble A., Hamlin N., Hauser H., Holroyd S., Jagels K., Leather S., Moule S., Norberczak H., O'Neil S., Ormond D., Price C., Rabbinowitsch E., Rutter S., Sanders M., Saunders D., Seeger K., Sharp S., Simmonds M., Skelton J., Squares R., Squares S., Stevens K., Unwin L., Whitehead S., Barrell B.G., Maskell D.J. Nat. Genet. 35:32-40(2003) [PubMed: 12910271] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Tohama I / ATCC BAA-589 / NCTC 13251.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BX640418 Genomic DNA. Translation: CAE42642.1.
RefSeq	NP_881005.1. NC_002929.2.
3D structure databases
ProteinModelPortal	Q7VW93.
SMR	Q7VW93. Positions 14-485.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	2665663.
GenomeReviews	Gene locus BP2371 in contig BX470248_GR.
KEGG	bpe:BP2371.
NMPDR	fig|257313.1.peg.2079.
PATRIC	21158146. VBIBorPer7866_2554.
Phylogenomic databases
HOGENOM	HBG298383.
OMA	CLMDTLG.
PhylomeDB	Q7VW93.
ProtClustDB	PRK09425.
Family and domain databases
InterPro	IPR012705. 2Me_IsoCit_deHydtase_PrpD. IPR005656. MmgE_PrpD. [Graphical view]
KO	K01720.
PANTHER	PTHR16943. MmgE_PrpD. 1 hit.
Pfam	PF03972. MmgE_PrpD. 1 hit. [Graphical view]
SUPFAM	SSF103378. MmgE_PrpD. 1 hit.
TIGRFAMs	TIGR02330. PrpD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q7VW93_BORPE

Accession

Primary (citable) accession number: Q7VW93

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2003
Last sequence update:	October 1, 2003
Last modified:	December 14, 2011
This is version 42 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)