Q7VU61 (APAG_BORPE) Reviewed, UniProtKB/Swiss-Prot
Last modified
January 25, 2012.
Version 49.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Protein ApaG | ||||
| Gene names |
| ||||
| Organism | Bordetella pertussis | ||||
| Taxonomic identifier | 520 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Alcaligenaceae › Bordetella |
Protein attributes
| Sequence length | 131 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Sequence similarities | Contains 1 apaG domain. |
Ontologies
| Keywords | |
|---|---|
| Technical term | 3D-structure Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| None. [Check GOA] | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||||||||||||||||||||
Molecule processing | |||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 131 | 131 | Protein ApaG HAMAP MF_00791 | PRO_0000197940 | |||||||||||||||||||||||
Regions | |||||||||||||||||||||||||||
| Domain | 7 – 131 | 125 | ApaG | ||||||||||||||||||||||||
Secondary structure | |||||||||||||||||||||||||||
Helix Strand Turn | |||||||||||||||||||||||||||
| Beta strand | 13 – 21 | 9 | |||||||||||||||||||||||||
| Helix | 23 – 25 | 3 | |||||||||||||||||||||||||
| Helix | 28 – 30 | 3 | |||||||||||||||||||||||||
| Beta strand | 32 – 43 | 12 | |||||||||||||||||||||||||
| Beta strand | 45 – 47 | 3 | |||||||||||||||||||||||||
| Beta strand | 49 – 59 | 11 | |||||||||||||||||||||||||
| Beta strand | 65 – 75 | 11 | |||||||||||||||||||||||||
| Beta strand | 85 – 109 | 25 | |||||||||||||||||||||||||
| Beta strand | 114 – 125 | 12 | |||||||||||||||||||||||||
Sequences
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References
| [1] | "Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica." Parkhill J., Sebaihia M., Preston A., Murphy L.D., Thomson N.R., Harris D.E., Holden M.T.G., Churcher C.M., Bentley S.D., Mungall K.L., Cerdeno-Tarraga A.-M., Temple L., James K.D., Harris B., Quail M.A., Achtman M., Atkin R., Baker S. Maskell D.J.Nat. Genet. 35:32-40(2003) [PubMed: 12910271] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Tohama I / ATCC BAA-589 / NCTC 13251. |
Cross-references
Sequence databases | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| EMBL GenBank DDBJ | BX640421 Genomic DNA. Translation: CAE43533.1. | ||||||||||||
| RefSeq | NP_881811.1. NC_002929.2. | ||||||||||||
3D structure databases | |||||||||||||
| PDBe RCSB PDB PDBj |
| ||||||||||||
| ProteinModelPortal | Q7VU61. | ||||||||||||
| SMR | Q7VU61. Positions 7-129. | ||||||||||||
| ModBase | Search... | ||||||||||||
Protocols and materials databases | |||||||||||||
| StructuralBiologyKnowledgebase | Search... | ||||||||||||
Genome annotation databases | |||||||||||||
| GeneID | 2667479. | ||||||||||||
| GenomeReviews | Gene locus BP3267 in contig BX470248_GR. | ||||||||||||
| KEGG | bpe:BP3267. | ||||||||||||
| PATRIC | 21160134. VBIBorPer7866_3538. | ||||||||||||
Phylogenomic databases | |||||||||||||
| HOGENOM | HBG746214. | ||||||||||||
| OMA | SRHWVIT. | ||||||||||||
| PhylomeDB | Q7VU61. | ||||||||||||
| ProtClustDB | PRK05461. | ||||||||||||
Enzyme and pathway databases | |||||||||||||
| BioCyc | BPER257313:BP3267-MONOMER. | ||||||||||||
Family and domain databases | |||||||||||||
| HAMAP | MF_00791. ApaG. [Tree] | ||||||||||||
| InterPro | IPR007474. ApaG_domain. IPR023065. Uncharacterised_ApaG. [Graphical view] | ||||||||||||
| Gene3D | G3DSA:2.60.40.1470. ApaG. 1 hit. | ||||||||||||
| KO | K06195. | ||||||||||||
| Pfam | PF04379. DUF525. 1 hit. [Graphical view] | ||||||||||||
| SUPFAM | SSF110069. ApaG. 1 hit. | ||||||||||||
| PROSITE | PS51087. APAG. 1 hit. [Graphical view] | ||||||||||||
| ProtoNet | Search... | ||||||||||||
Entry information
| Entry name | APAG_BORPE | ||||||||
| Accession | Primary (citable) accession number: Q7VU61 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Prokaryotic Protein Annotation Program | ||||||||
Relevant documents
| PDB cross-references Index of Protein Data Bank (PDB) cross-references |
| SIMILARITY comments Index of protein domains and families |

Clusters with