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Protein

Protein ApaG

Gene

apaG

Organism
Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciBPER257313:BP3267-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Protein ApaGUniRule annotation
Gene namesi
Name:apaGUniRule annotation
Ordered Locus Names:BP3267
OrganismiBordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)
Taxonomic identifieri257313 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesAlcaligenaceaeBordetella
Proteomesi
  • UP000002676 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 131131Protein ApaGPRO_0000197940Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi257313.BP3267.

Structurei

Secondary structure

1
131
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Beta strandi13 – 219Combined sources
Helixi23 – 253Combined sources
Helixi28 – 303Combined sources
Beta strandi32 – 4312Combined sources
Beta strandi45 – 473Combined sources
Beta strandi49 – 5911Combined sources
Beta strandi65 – 7511Combined sources
Beta strandi85 – 10925Combined sources
Beta strandi114 – 12512Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1XQ4X-ray2.70A/B/C/D1-131[»]
ProteinModelPortaliQ7VU61.
SMRiQ7VU61. Positions 7-129.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ7VU61.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini7 – 131125ApaGUniRule annotationAdd
BLAST

Sequence similaritiesi

Contains 1 apaG domain.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105NWN. Bacteria.
COG2967. LUCA.
HOGENOMiHOG000255805.
KOiK06195.
OMAiGTMRGEY.

Family and domain databases

Gene3Di2.60.40.1470. 1 hit.
HAMAPiMF_00791. ApaG. 1 hit.
InterProiIPR007474. ApaG_domain.
IPR023065. Uncharacterised_ApaG.
[Graphical view]
PfamiPF04379. DUF525. 1 hit.
[Graphical view]
SUPFAMiSSF110069. SSF110069. 1 hit.
PROSITEiPS51087. APAG. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q7VU61-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSNRERPVKP YDLTVSVTPR YVPEQSDPSQ QQYVFAYTVR ITNTGSHPAQ
60 70 80 90 100
VISRHWIITD GEERVQEVRG LGVVGQQPLL APGETFEYTS GCPLPTPIGT
110 120 130
MRGTYHCVGE NGIPFEVPIA EFLLAMPRTL H
Length:131
Mass (Da):14,610
Last modified:October 1, 2003 - v1
Checksum:iD5AF4B4B9FDEDEE0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX640421 Genomic DNA. Translation: CAE43533.1.
RefSeqiNP_881811.1. NC_002929.2.
WP_010929411.1. NC_002929.2.

Genome annotation databases

EnsemblBacteriaiCAE43533; CAE43533; BP3267.
GeneIDi2667479.
KEGGibpe:BP3267.
PATRICi21160134. VBIBorPer7866_3538.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX640421 Genomic DNA. Translation: CAE43533.1.
RefSeqiNP_881811.1. NC_002929.2.
WP_010929411.1. NC_002929.2.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1XQ4X-ray2.70A/B/C/D1-131[»]
ProteinModelPortaliQ7VU61.
SMRiQ7VU61. Positions 7-129.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi257313.BP3267.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAE43533; CAE43533; BP3267.
GeneIDi2667479.
KEGGibpe:BP3267.
PATRICi21160134. VBIBorPer7866_3538.

Phylogenomic databases

eggNOGiENOG4105NWN. Bacteria.
COG2967. LUCA.
HOGENOMiHOG000255805.
KOiK06195.
OMAiGTMRGEY.

Enzyme and pathway databases

BioCyciBPER257313:BP3267-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ7VU61.

Family and domain databases

Gene3Di2.60.40.1470. 1 hit.
HAMAPiMF_00791. ApaG. 1 hit.
InterProiIPR007474. ApaG_domain.
IPR023065. Uncharacterised_ApaG.
[Graphical view]
PfamiPF04379. DUF525. 1 hit.
[Graphical view]
SUPFAMiSSF110069. SSF110069. 1 hit.
PROSITEiPS51087. APAG. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiAPAG_BORPE
AccessioniPrimary (citable) accession number: Q7VU61
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 19, 2004
Last sequence update: October 1, 2003
Last modified: September 7, 2016
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.