Reviewed,
UniProtKB/Swiss-Prot Q7VU61 (APAG_BORPE)
Last modified
February 9, 2010.
Version 39.
History...
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90%,
50% identity |
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Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents
Names and origin
| Protein names | Recommended name: Protein apaG | ||||
| Gene names |
| ||||
| Organism | Bordetella pertussis [Complete proteome] [HAMAP] | ||||
| Taxonomic identifier | 520 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Alcaligenaceae › Bordetella |
Protein attributes
| Sequence length | 131 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level. |
Ontologies
| Keywords | |
|---|---|
| Technical term | 3D-structure Complete proteome |
| Gene Ontology (GO) | |
| None. [Check GOA] | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||||||||||||||||||||
Molecule processing | |||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 131 | 131 | Protein apaG HAMAP MF_00791 | PRO_0000197940 | |||||||||||||||||||||||
Regions | |||||||||||||||||||||||||||
| Domain | 7 – 131 | 125 | ApaG | ||||||||||||||||||||||||
Secondary structure | |||||||||||||||||||||||||||
Helix Strand Turn | |||||||||||||||||||||||||||
| Beta strand | 13 – 21 | 9 | |||||||||||||||||||||||||
| Helix | 23 – 25 | 3 | |||||||||||||||||||||||||
| Helix | 28 – 30 | 3 | |||||||||||||||||||||||||
| Beta strand | 32 – 43 | 12 | |||||||||||||||||||||||||
| Beta strand | 45 – 47 | 3 | |||||||||||||||||||||||||
| Beta strand | 49 – 59 | 11 | |||||||||||||||||||||||||
| Beta strand | 65 – 75 | 11 | |||||||||||||||||||||||||
| Beta strand | 85 – 109 | 25 | |||||||||||||||||||||||||
| Beta strand | 114 – 125 | 12 | |||||||||||||||||||||||||
Sequences
| ||||||||||||||||||
References
| [1] | "Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica." Parkhill J., Sebaihia M., Preston A., Murphy L.D., Thomson N.R., Harris D.E., Holden M.T.G., Churcher C.M., Bentley S.D., Mungall K.L., Cerdeno-Tarraga A.-M., Temple L., James K.D., Harris B., Quail M.A., Achtman M., Atkin R., Baker S. Maskell D.J.Nat. Genet. 35:32-40(2003) [PubMed: 12910271] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Tohama I / ATCC BAA-589 / NCTC 13251. |
Cross-references
Sequence databases | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| EMBL GenBank DDBJ | BX640421 Genomic DNA. Translation: CAE43533.1. | ||||||||||||
| RefSeq | NP_881811.1. | ||||||||||||
3D structure databases | |||||||||||||
| PDBe RCSB PDB PDBj |
| ||||||||||||
| ModBase | Search... | ||||||||||||
Genome annotation databases | |||||||||||||
| GeneID | 2667479. | ||||||||||||
| KEGG | bpe:BP3267. | ||||||||||||
Organism-specific databases | |||||||||||||
| CMR | Search... | ||||||||||||
Phylogenomic databases | |||||||||||||
| HOGENOM | HBG746214. | ||||||||||||
| OMA | QLISRHW. | ||||||||||||
| PhylomeDB | Q7VU61. | ||||||||||||
Enzyme and pathway databases | |||||||||||||
| BioCyc | BPER257313:BP3267-MONOMER. | ||||||||||||
Family and domain databases | |||||||||||||
| HAMAP | MF_00791. ApaG. [Tree] | ||||||||||||
| InterPro | IPR007474. ApaG. [Graphical view] | ||||||||||||
| Gene3D | G3DSA:2.60.40.1470. ApaG. 1 hit. | ||||||||||||
| Pfam | PF04379. DUF525. 1 hit. [Graphical view] | ||||||||||||
| PROSITE | PS51087. APAG. 1 hit. [Graphical view] | ||||||||||||
| ProtoNet | Search... | ||||||||||||
Entry information
| Entry name | APAG_BORPE | ||||||||
| Accession | Primary (citable) accession number: Q7VU61 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes) | ||||||||
Relevant documents
| PDB cross-references Index of Protein Data Bank (PDB) cross-references |
| SIMILARITY comments Index of protein domains and families |

Clusters with


