HD_1797

Functionⁱ

Sites

Feature key	Position(s)	Length	Description
Metal bindingⁱ	412 – 412	1	MagnesiumCombined sources Automatic assertion inferred from combination of experimental and computational evidenceⁱ PDB:2P4P
Metal bindingⁱ	413 – 413	1	Magnesium; via carbonyl oxygenCombined sources Automatic assertion inferred from combination of experimental and computational evidenceⁱ PDB:2P4P
Metal bindingⁱ	414 – 414	1	MagnesiumCombined sources Automatic assertion inferred from combination of experimental and computational evidenceⁱ PDB:2P4P

GO - Molecular functionⁱ

flavin adenine dinucleotide binding Source: InterPro
metal ion binding Source: UniProtKB-KW
oxidoreductase activity, acting on CH-OH group of donors Source: InterPro

Complete GO annotation...

Keywords - Ligandⁱ

MagnesiumCombined sources, Metal-bindingCombined sources

Enzyme and pathway databases

BioCycⁱ	HDUC233412:GH5F-1621-MONOMER.

BioCycⁱ

HDUC233412:GH5F-1621-MONOMER.

Names & Taxonomyⁱ

Protein namesⁱ	Submitted name: Uncharacterized proteinImported Automatic assertion inferred from database entriesⁱ EMBL:AAP96548.1
Gene namesⁱ	Ordered Locus Names:HD_1797Imported Automatic assertion inferred from database entriesⁱ EMBL:AAP96548.1
Organismⁱ	Haemophilus ducreyi (strain 35000HP / ATCC 700724)Imported Automatic assertion inferred from database entriesⁱ EMBL:AAP96548.1 Proteomes:UP000001022
Taxonomic identifierⁱ	233412 [NCBI]
Taxonomic lineageⁱ	cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Pasteurellales › Pasteurellaceae › Haemophilus › Haemophilus ducreyi
Proteomesⁱ	UP000001022 Componentⁱ: Chromosome

Subcellular locationⁱ

Topology

Feature key	Position(s)	Length	Description	Actions
Transmembraneⁱ	6 – 30	25	HelicalSequence analysis Automatic assertion according to rulesⁱ SAM:Phobius	Add BLAST
Transmembraneⁱ	59 – 82	24	HelicalSequence analysis Automatic assertion according to rulesⁱ SAM:Phobius	Add BLAST
Transmembraneⁱ	102 – 122	21	HelicalSequence analysis Automatic assertion according to rulesⁱ SAM:Phobius	Add BLAST
Transmembraneⁱ	134 – 156	23	HelicalSequence analysis Automatic assertion according to rulesⁱ SAM:Phobius	Add BLAST

GO - Cellular componentⁱ

integral component of membrane Source: UniProtKB-KW

Complete GO annotation...

Keywords - Cellular componentⁱ

Membrane

PTM / Processingⁱ

Amino acid modifications

Feature key	Position(s)	Length	Description
Modified residueⁱ	393 – 393	1	N6,N6-dimethyllysineCombined sources Automatic assertion inferred from combination of experimental and computational evidenceⁱ PDB:2P4P
Modified residueⁱ	396 – 396	1	N6,N6-dimethyllysineCombined sources Automatic assertion inferred from combination of experimental and computational evidenceⁱ PDB:2P4P
Modified residueⁱ	397 – 397	1	N6,N6-dimethyllysineCombined sources Automatic assertion inferred from combination of experimental and computational evidenceⁱ PDB:2P4P
Modified residueⁱ	405 – 405	1	N6,N6-dimethyllysineCombined sources Automatic assertion inferred from combination of experimental and computational evidenceⁱ PDB:2P4P
Modified residueⁱ	407 – 407	1	N6,N6-dimethyllysineCombined sources Automatic assertion inferred from combination of experimental and computational evidenceⁱ PDB:2P4P
Modified residueⁱ	427 – 427	1	N6,N6-dimethyllysineCombined sources Automatic assertion inferred from combination of experimental and computational evidenceⁱ PDB:2P4P

Interactionⁱ

Protein-protein interaction databases

STRINGⁱ	233412.HD1797.

STRINGⁱ

233412.HD1797.

Structureⁱ

3D structure databases

Select the link destinations:
PDBeⁱ
RCSB PDBⁱ
PDBjⁱ

Links Updated

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
2P4P	X-ray	1.80	A/B	347-429	[»]

ProteinModelPortalⁱ

Q7VKS4.

SMRⁱ

Q7VKS4. Positions 347-426.

ModBaseⁱ

Search...

MobiDBⁱ

Search...

Miscellaneous databases

EvolutionaryTraceⁱ	Q7VKS4.

EvolutionaryTraceⁱ

Q7VKS4.

Family & Domainsⁱ

Domains and Repeats

Feature key	Position(s)	Length	Description	Graphical view	Feature identifier	Actions
Domainⁱ	218 – 279	62	CBSInterPro annotation Automatic assertion inferred from signature matchⁱ PROSITE:PS51371			Add BLAST
Domainⁱ	284 – 341	58	CBSInterPro annotation Automatic assertion inferred from signature matchⁱ PROSITE:PS51371			Add BLAST

Keywords - Domainⁱ

Transmembrane, Transmembrane helixSequence analysisSAAS annotation

Phylogenomic databases

eggNOGⁱ	ENOG4105C37. Bacteria. COG1253. LUCA.
OMAⁱ	QPHSKFL.
OrthoDBⁱ	POG091H025R.

Family and domain databases

Gene3Dⁱ	3.30.465.10. 1 hit.
InterProⁱ	IPR000644. CBS_dom. IPR016169. CO_DH_flavot_FAD-bd_sub2. IPR002550. DUF21. IPR016166. FAD-bd_2. IPR005170. Transptr-assoc_dom. [Graphical view]
Pfamⁱ	PF00571. CBS. 1 hit. PF03471. CorC_HlyC. 1 hit. PF01595. DUF21. 1 hit. [Graphical view]
SMARTⁱ	SM01091. CorC_HlyC. 1 hit. [Graphical view]
SUPFAMⁱ	SSF56176. SSF56176. 1 hit.
PROSITEⁱ	PS51371. CBS. 2 hits. [Graphical view]

Sequenceⁱ

Sequence statusⁱ: Complete.

Q7VKS4-1 [UniParc]FASTA Add to basket

« Hide

        10         20         30         40         50
MSLFEAILII LVLIIISAVI SSSEISLAGA RKLKLHSLAK DGDIRAEKVM 
        60         70         80         90        100
RLQEQPGRFI TMVQIGLNMV AILGGVVGES AITPYLAKLL AQYSQAEWTE 
       110        120        130        140        150
STASWLSFAL VTSAFVLLAD LMPKRIAMTY PEQVAVRTIN IMLCLITIFK 
       160        170        180        190        200
PLVLLFDSIA NLLFRLFGIS TVRQDNMTSE DIVAVVDAGA KAGILKAQEH 
       210        220        230        240        250
YLIENVFEMQ ERRVTSTMTT RENIIFLDRK DNREQVLATL GEDPYSKVLI 
       260        270        280        290        300
CDNGLDKILG YIETHDLLTQ YLKNDHVSLV DSRLLRKPVF IPDTLSLYEV 
       310        320        330        340        350
LELFKSAGED FAVIVNEYAL VVGILTINDV MSIVMGELVS TEEEQIMRRN 
       360        370        380        390        400
EDSWLIDGAT PLEDVMRALN IHTFPRDENY ETIGGFMMYM LRKIPKKTDF 
       410        420 
VLYDKYKFEI IDTENFRIDQ LMVSFRKDV

Length:429

Mass (Da):48,588

Last modified:October 1, 2003 - v1

Checksum:ⁱ95174D049492AF46

GO

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	AE017143 Genomic DNA. Translation: AAP96548.1.
RefSeqⁱ	WP_010945577.1. NC_002940.2.

Genome annotation databases

EnsemblBacteriaⁱ	AAP96548; AAP96548; HD_1797.
GeneIDⁱ	24944190.
KEGGⁱ	hdu:HD_1797.
PATRICⁱ	20179766. VBIHaeDuc133973_1510.

Cross-referencesⁱ

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	AE017143 Genomic DNA. Translation: AAP96548.1.
RefSeqⁱ	WP_010945577.1. NC_002940.2.

3D structure databases

Select the link destinations:
PDBeⁱ
RCSB PDBⁱ
PDBjⁱ

Links Updated

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
2P4P	X-ray	1.80	A/B	347-429	[»]

ProteinModelPortalⁱ

Q7VKS4.

SMRⁱ

Q7VKS4. Positions 347-426.

ModBaseⁱ

Search...

MobiDBⁱ

Search...

Protein-protein interaction databases

STRINGⁱ	233412.HD1797.

STRINGⁱ

233412.HD1797.

Protocols and materials databases

DNASUⁱ	1491645.
Structural Biology Knowledgebase	Search...

Genome annotation databases

EnsemblBacteriaⁱ	AAP96548; AAP96548; HD_1797.
GeneIDⁱ	24944190.
KEGGⁱ	hdu:HD_1797.
PATRICⁱ	20179766. VBIHaeDuc133973_1510.

Phylogenomic databases

eggNOGⁱ	ENOG4105C37. Bacteria. COG1253. LUCA.
OMAⁱ	QPHSKFL.
OrthoDBⁱ	POG091H025R.

Enzyme and pathway databases

BioCycⁱ	HDUC233412:GH5F-1621-MONOMER.

BioCycⁱ

HDUC233412:GH5F-1621-MONOMER.

Miscellaneous databases

EvolutionaryTraceⁱ	Q7VKS4.

EvolutionaryTraceⁱ

Q7VKS4.

Family and domain databases

Gene3Dⁱ	3.30.465.10. 1 hit.
InterProⁱ	IPR000644. CBS_dom. IPR016169. CO_DH_flavot_FAD-bd_sub2. IPR002550. DUF21. IPR016166. FAD-bd_2. IPR005170. Transptr-assoc_dom. [Graphical view]
Pfamⁱ	PF00571. CBS. 1 hit. PF03471. CorC_HlyC. 1 hit. PF01595. DUF21. 1 hit. [Graphical view]
SMARTⁱ	SM01091. CorC_HlyC. 1 hit. [Graphical view]
SUPFAMⁱ	SSF56176. SSF56176. 1 hit.
PROSITEⁱ	PS51371. CBS. 2 hits. [Graphical view]
ProtoNetⁱ	Search...

Entry informationⁱ

Entry nameⁱ

Q7VKS4_HAEDU

Accessionⁱ

Primary (citable) accession number: Q7VKS4

Entry historyⁱ

Integrated into UniProtKB/TrEMBL:	October 1, 2003
Last sequence update:	October 1, 2003
Last modified:	September 7, 2016
This is version 89 of the entry and version 1 of the sequence. [Complete history]

Entry statusⁱ

Unreviewed (UniProtKB/TrEMBL)

Miscellaneousⁱ

Keywords - Technical termⁱ

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsⁱ

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:

100%	UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%	UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%	UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

UniProtKB

UniParc

Help

UniRef

Proteomes

Annotation systems

Supporting data

UniProtKB - Q7VKS4 (Q7VKS4_HAEDU)

UniProt

Q7VKS4 - Q7VKS4_HAEDU

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Uncharacterized protein

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<p>Provides any useful information about the protein, mostly biological knowledge.</p><p><a href='../manual/function_section' target='_top'>More...</a></p>Functioni

Sites

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:</p><p><a href='../manual/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

Enzyme and pathway databases

<p>Provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.</p><p><a href='../manual/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>Provides information on the location and the topology of the mature protein in the cell.</p><p><a href='../manual/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Topology

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:</p><p><a href='../manual/gene_ontology' target='_top'>More...</a></p>GO - Cellular componenti

<p>Describes post-translational modifications (PTMs) and/or processing events.</p><p><a href='../manual/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Amino acid modifications

<p>Provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.</p><p><a href='../manual/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

<p>Provides information on the tertiary and secondary structure of a protein.</p><p><a href='../manual/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

Miscellaneous databases

<p>Provides information on sequence similarities with other proteins and the domain(s) present in a protein.</p><p><a href='../manual/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Phylogenomic databases

Family and domain databases

<p>Displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including length and molecular weight.</p><p><a href='../manual/sequences_section' target='_top'>More...</a></p>Sequencei

Sequence databases

Genome annotation databases

<p>Is used to point to information related to entries and found in data collections other than UniProtKB.</p><p><a href='../manual/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

3D structure databases

Protein-protein interaction databases

Protocols and materials databases

Genome annotation databases

Phylogenomic databases

Enzyme and pathway databases

Miscellaneous databases

Family and domain databases

<p>Provides general information on the entry.</p><p><a href='../manual/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>Contains any relevant information that doesn’t fit in any other defined sections</p><p><a href='../manual/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Functionⁱ

GO - Molecular functionⁱ

Names & Taxonomyⁱ

Subcellular locationⁱ

GO - Cellular componentⁱ

PTM / Processingⁱ

Interactionⁱ

Structureⁱ

Family & Domainsⁱ

Sequenceⁱ

Cross-referencesⁱ

Entry informationⁱ

Miscellaneousⁱ