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Q7VJS5 (Q7VJS5_HELHP) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 67. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=2.7.7.38 EMBL AAP76765.1
Gene names
Name:kdsB EMBL AAP76765.1
Ordered Locus Names:HH_0168 EMBL AAP76765.1
OrganismHelicobacter hepaticus (strain ATCC 51449 / 3B1) [Complete proteome] [HAMAP] EMBL AAP76765.1
Taxonomic identifier235279 [NCBI]
Taxonomic lineageBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesHelicobacteraceaeHelicobacter

Protein attributes

Sequence length241 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria By similarity. SAAS SAAS004528

Catalytic activity

CTP + 3-deoxy-D-manno-octulosonate = diphosphate + CMP-3-deoxy-D-manno-octulosonate. SAAS SAAS004528

Pathway

Bacterial outer membrane biogenesis; lipopolysaccharide biosynthesis. SAAS SAAS004528

Nucleotide-sugar biosynthesis; CMP-3-deoxy-D-manno-octulosonate biosynthesis; CMP-3-deoxy-D-manno-octulosonate from 3-deoxy-D-manno-octulosonate and CTP: step 1/1. SAAS SAAS004528

Subcellular location

Cytoplasm By similarity SAAS SAAS004528.

Sequences

Sequence LengthMass (Da)Tools
Q7VJS5 [UniParc].

Last modified October 1, 2003. Version 1.
Checksum: 8CBEBEFFD547DE26

FASTA24126,738
        10         20         30         40         50         60 
MIIIPARLES TRFPKKVLCD IGGLPMVVRT ALNAQQVDSV VVACDDEQIA SVCKTHKIPC 

        70         80         90        100        110        120 
VMTAKSHSSG TDRCAEASKK LGLSDNEIIL NIQADEPFLE TSVIRTLQDL MKKHTPFMGS 

       130        140        150        160        170        180 
LAKIICESDI ADSNLVKVVL NAHNEAIYFS RSPIPFCRDG QSEELKTYPY LGHLGLYGFS 

       190        200        210        220        230        240 
AKSLQEFCSL PKSPLEEIEK LEQLRALYQG KTIAMAVVQT QSVGIDTPQD YQRAIEHFKH 


Q 

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References

[1]"The complete genome sequence of the carcinogenic bacterium Helicobacter hepaticus."
Suerbaum S., Josenhans C., Sterzenbach T., Drescher B., Brandt P., Bell M., Droge M., Fartmann B., Fischer H.P., Ge Z., Horster A., Holland R., Klein K., Konig J., Macko L., Mendz G.L., Nyakatura G., Schauer D.B. expand/collapse author list , Shen Z., Weber J., Frosch M., Fox J.G.
Proc. Natl. Acad. Sci. U.S.A. 100:7901-7906(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 51449 / 3B1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE017125 Genomic DNA. Translation: AAP76765.1.
RefSeqNP_859699.1. NC_004917.1.

3D structure databases

ProteinModelPortalQ7VJS5.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING235279.HH0168.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAP76765; AAP76765; HH_0168.
GeneID1493223.
KEGGhhe:HH0168.
PATRIC20587748. VBIHelHep90276_0165.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK00979.
OMADDQRIAD.
OrthoDBEOG6KT2SK.

Enzyme and pathway databases

BioCycHHEP235279:GHUA-172-MONOMER.
UniPathwayUPA00030.
UPA00358; UER00476.

Family and domain databases

Gene3D3.90.550.10. 1 hit.
InterProIPR003329. Cytidylyl_trans.
IPR004528. KdsB.
IPR029044. Nucleotide-diphossugar_trans.
[Graphical view]
PANTHERPTHR21485:SF4. PTHR21485:SF4. 1 hit.
PfamPF02348. CTP_transf_3. 1 hit.
[Graphical view]
SUPFAMSSF53448. SSF53448. 1 hit.
TIGRFAMsTIGR00466. kdsB. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ7VJS5_HELHP
AccessionPrimary (citable) accession number: Q7VJS5
Entry history
Integrated into UniProtKB/TrEMBL: October 1, 2003
Last sequence update: October 1, 2003
Last modified: June 11, 2014
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)